BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E12
(455 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014134-2140|AAF53151.1| 69|Drosophila melanogaster CG6770-PA... 122 3e-28
BT022184-1|AAY51578.1| 165|Drosophila melanogaster IP01227p pro... 27 9.1
AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p pro... 27 9.1
AE014297-3847|AAF56504.1| 276|Drosophila melanogaster CG17196-P... 27 9.1
AE013599-2784|AAF57625.2| 1022|Drosophila melanogaster CG15100-P... 27 9.1
>AE014134-2140|AAF53151.1| 69|Drosophila melanogaster CG6770-PA
protein.
Length = 69
Score = 122 bits (293), Expect = 3e-28
Identities = 51/62 (82%), Positives = 56/62 (90%)
Frame = +1
Query: 109 MSEAFFDEYDYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENN 288
MSEA FDEY++YNFDHDKHIF+GH GKQR KREA EHTNHFDPSGHSRKI+TKL+NT NN
Sbjct: 1 MSEAHFDEYEHYNFDHDKHIFSGHSGKQRNKREANEHTNHFDPSGHSRKILTKLMNTNNN 60
Query: 289 KK 294
K
Sbjct: 61 NK 62
>BT022184-1|AAY51578.1| 165|Drosophila melanogaster IP01227p
protein.
Length = 165
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 320 HRYIYCLLDFLLFSVFTNFVTIFLE 246
HRY + L +L F +F + T+F++
Sbjct: 34 HRYFFWLTFYLAFGIFMSMATLFVD 58
>AY119445-1|AAM50099.1| 1012|Drosophila melanogaster AT05114p
protein.
Length = 1012
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 326 TRVWLVEGILPSCLAKGGRYG 388
TR WL EG+ P C+ + ++G
Sbjct: 472 TRAWLKEGLKPRCITRDLKWG 492
>AE014297-3847|AAF56504.1| 276|Drosophila melanogaster CG17196-PA
protein.
Length = 276
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/25 (36%), Positives = 16/25 (64%)
Frame = -1
Query: 320 HRYIYCLLDFLLFSVFTNFVTIFLE 246
HRY + L +L F +F + T+F++
Sbjct: 145 HRYFFWLTFYLAFGIFMSMATLFVD 169
>AE013599-2784|AAF57625.2| 1022|Drosophila melanogaster CG15100-PA
protein.
Length = 1022
Score = 27.5 bits (58), Expect = 9.1
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 326 TRVWLVEGILPSCLAKGGRYG 388
TR WL EG+ P C+ + ++G
Sbjct: 472 TRAWLKEGLKPRCITRDLKWG 492
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,803,191
Number of Sequences: 53049
Number of extensions: 385447
Number of successful extensions: 1211
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1190
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1211
length of database: 24,988,368
effective HSP length: 79
effective length of database: 20,797,497
effective search space used: 1497419784
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -