Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E12
         (455 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41993-5|AAA83447.2|  451|Caenorhabditis elegans Hypothetical pr...    32   0.23 
Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical pr...    31   0.30 
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    28   2.8  
Z81540-12|CAB04396.2|  149|Caenorhabditis elegans Hypothetical p...    27   4.9  
Z68295-1|CAA92587.1|  325|Caenorhabditis elegans Hypothetical pr...    27   4.9  
AF022971-9|AAG23978.2|  345|Caenorhabditis elegans Serpentine re...    27   6.5  
U88308-3|AAB42329.2|  430|Caenorhabditis elegans Resistance to i...    27   8.6  
U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-li...    27   8.6  

>U41993-5|AAA83447.2|  451|Caenorhabditis elegans Hypothetical
           protein F44A2.2 protein.
          Length = 451

 Score = 31.9 bits (69), Expect = 0.23
 Identities = 15/43 (34%), Positives = 23/43 (53%)
 Frame = +1

Query: 43  VRKLLSSALIVFCTYNLFTNVTMSEAFFDEYDYYNFDHDKHIF 171
           +R+L +S L VFC  +    +T  +AFF+    Y F+    IF
Sbjct: 45  IRRLATSRLAVFCEKSHVERLTDCDAFFESTSEYYFERSPIIF 87


>Z22181-7|CAA80189.2|   62|Caenorhabditis elegans Hypothetical
           protein ZK632.9 protein.
          Length = 62

 Score = 31.5 bits (68), Expect = 0.30
 Identities = 14/38 (36%), Positives = 20/38 (52%)
 Frame = +1

Query: 181 GGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTENNKK 294
           G  +RTK +  EH +   P G +RK+V    N E  +K
Sbjct: 23  GSGKRTKSDRVEHKHASQPGGDTRKVVQTASNGEAKRK 60


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 28.3 bits (60), Expect = 2.8
 Identities = 10/25 (40%), Positives = 18/25 (72%)
 Frame = -2

Query: 343 YKPYSCLFTVTSIVYWTFCCSPYSL 269
           +K ++    + SI+Y+TFCC P+S+
Sbjct: 242 HKKFNERTILQSILYFTFCCVPFSV 266


>Z81540-12|CAB04396.2|  149|Caenorhabditis elegans Hypothetical
           protein F46B3.15 protein.
          Length = 149

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -1

Query: 257 IFLECPEGSK*FVCSVASRLVRCLPPCPVKMC 162
           +F  CP+ S   V    ++ V   PPC +K C
Sbjct: 88  VFTTCPKMSSCIVVDGKAKCVPRSPPCTIKQC 119


>Z68295-1|CAA92587.1|  325|Caenorhabditis elegans Hypothetical
           protein C07C7.1 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 9/24 (37%), Positives = 18/24 (75%)
 Frame = -1

Query: 368 LGNSVIFLLQAILVFIHRYIYCLL 297
           LG+  IFLL  +L++++  +YC++
Sbjct: 143 LGSLYIFLLDYLLIYLYFQVYCVM 166


>AF022971-9|AAG23978.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein38 protein.
          Length = 345

 Score = 27.1 bits (57), Expect = 6.5
 Identities = 9/25 (36%), Positives = 18/25 (72%)
 Frame = -2

Query: 343 YKPYSCLFTVTSIVYWTFCCSPYSL 269
           +K ++    + +I+Y+TFCC P+S+
Sbjct: 242 HKKFNERTILQAILYFTFCCVPFSV 266


>U88308-3|AAB42329.2|  430|Caenorhabditis elegans Resistance to
           inhibitors of cholinesteraseprotein 19 protein.
          Length = 430

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/51 (25%), Positives = 23/51 (45%)
 Frame = +1

Query: 133 YDYYNFDHDKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTKLVNTEN 285
           Y+ Y+F+   H+ TG   ++  K E  E      P G+  ++   L   E+
Sbjct: 265 YNNYDFEILSHLATGTKPERERKSEKEESAKTSQPRGNEEELKNLLFGRES 315


>U56963-2|AAB38119.2|  326|Caenorhabditis elegans Neuropeptide-like
           protein protein16 protein.
          Length = 326

 Score = 26.6 bits (56), Expect = 8.6
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +1

Query: 157 DKHIFTGHGGKQRTKREATEHTNHFDPSGHSRKIVTK 267
           ++ +   HG   R KR + EH  H DP  H+ K  T+
Sbjct: 78  EEEVEISHGMHHREKRHS-EHLPHPDPPSHTAKRSTE 113


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,175,459
Number of Sequences: 27780
Number of extensions: 199293
Number of successful extensions: 527
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 511
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 527
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 809909048
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)