Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E11
(278 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal pro... 123 2e-29
Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical pr... 32 0.070
Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical pr... 29 0.49
Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical pr... 28 0.86
AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP ... 28 0.86
Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical pr... 27 2.6
Z81537-11|CAB04377.2| 329|Caenorhabditis elegans Hypothetical p... 26 3.5
U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion t... 26 3.5
AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical ... 26 3.5
AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific... 26 3.5
AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical ... 26 3.5
U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d... 26 4.6
AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical ... 26 4.6
AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical ... 26 4.6
AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase... 26 4.6
Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical pr... 25 6.1
Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical pr... 25 6.1
U55365-9|AAA98574.1| 346|Caenorhabditis elegans Hypothetical pr... 25 6.1
U42835-1|AAA83585.1| 87|Caenorhabditis elegans Hypothetical pr... 25 6.1
DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein. 25 6.1
AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical ... 25 6.1
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 25 8.0
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 25 8.0
Z81056-7|CAB02909.1| 309|Caenorhabditis elegans Hypothetical pr... 25 8.0
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 25 8.0
U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical p... 25 8.0
AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin p... 25 8.0
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 25 8.0
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 25 8.0
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 25 8.0
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 25 8.0
>AF002196-4|AAB53979.1| 198|Caenorhabditis elegans Ribosomal
protein, large subunitprotein 19 protein.
Length = 198
Score = 123 bits (297), Expect = 2e-29
Identities = 51/80 (63%), Positives = 70/80 (87%)
Frame = +2
Query: 38 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVVKKPVAVHSR 217
MS+L+LQKRLA++V++CGK +VWLDPNE++EI+ NSRQ+IR+++ DGL+++KPV VHSR
Sbjct: 1 MSNLRLQKRLASAVLKCGKHRVWLDPNEVSEISGANSRQSIRRLVNDGLIIRKPVTVHSR 60
Query: 218 ARVRKNTEARRKGRHCGFGK 277
R R+ EARRKGRH G+GK
Sbjct: 61 FRAREYEEARRKGRHTGYGK 80
>Z49131-3|CAA88976.1| 1211|Caenorhabditis elegans Hypothetical protein
ZC373.4 protein.
Length = 1211
Score = 31.9 bits (69), Expect = 0.070
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 134 ANTNSRQNIRKMIKDGLVVKKPVAVHSRARVRKNTEARRKGRHCG 268
++T+S +N+R ++ D VK V H R ++E R+K R G
Sbjct: 1055 SDTSSSKNVRILLTDEQSVKSSVRSHPSVSTRDSSEERKKVRFAG 1099
>Z35604-5|CAA84680.2| 269|Caenorhabditis elegans Hypothetical
protein ZK1058.5 protein.
Length = 269
Score = 29.1 bits (62), Expect = 0.49
Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
Frame = +2
Query: 146 SRQNIRKMIK-DGLVVKKPVAVHSRARVRKNTEARRKGR 259
S +N+RKMIK G VV + ++ A +R EAR R
Sbjct: 170 SAENVRKMIKIGGSVVVRDYGINDHAMIRFGREARISDR 208
>Z22177-2|CAA80145.1| 1418|Caenorhabditis elegans Hypothetical protein
ZK512.3 protein.
Length = 1418
Score = 28.3 bits (60), Expect = 0.86
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 247 ARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISD 131
A+ V ++ + + W L++ + +HLT +L I ISD
Sbjct: 1282 AKCQVLVDSQKNIPNEWHLENSSKDEHLTSILKMIGISD 1320
>AJ272503-1|CAC81659.1| 1027|Caenorhabditis elegans putative TRP
homologous cationchannel protein protein.
Length = 1027
Score = 28.3 bits (60), Expect = 0.86
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 247 ARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISD 131
A+ V ++ + + W L++ + +HLT +L I ISD
Sbjct: 891 AKCQVLVDSQKNIPNEWHLENSSKDEHLTSILKMIGISD 929
>Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical
protein F20E11.7 protein.
Length = 357
Score = 26.6 bits (56), Expect = 2.6
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = +2
Query: 62 RLAASVMRCGKKKVWLDPNEI 124
++A + + CG K+W DPN I
Sbjct: 171 QIAETSVTCGDDKIWQDPNGI 191
>Z81537-11|CAB04377.2| 329|Caenorhabditis elegans Hypothetical
protein F41D3.6 protein.
Length = 329
Score = 26.2 bits (55), Expect = 3.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 217 AGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHL 98
AG DSN+ + + +DHL + G+ D W+K H+
Sbjct: 204 AGTDSNYTI---SAIDHLRSLYHGVIFIMSNDPKWVKVHI 240
>U80931-7|AAB38003.2| 526|Caenorhabditis elegans Organic anion
transporter protein 1 protein.
Length = 526
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 229 ANTSAGMDSNWFLD--DQTILDHLTDVLSGISISDFIDLVW 113
++TS+ D N+ D DQ +L+ LT S+ D ++L W
Sbjct: 5 SSTSSEEDENFIKDVEDQKVLEVLTSHSKFKSLDDLVELRW 45
>AL021503-9|CAA16417.2| 572|Caenorhabditis elegans Hypothetical
protein Y68A4A.5 protein.
Length = 572
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 56 QKRLAASVMRCGKKKVWLDPNEI 124
Q ++A + + CG +W DPN I
Sbjct: 321 QAQIAETSVTCGSDAIWQDPNGI 343
>AF152095-1|AAF73198.1| 526|Caenorhabditis elegans multispecific
organic anion transporterprotein.
Length = 526
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = -2
Query: 229 ANTSAGMDSNWFLD--DQTILDHLTDVLSGISISDFIDLVW 113
++TS+ D N+ D DQ +L+ LT S+ D ++L W
Sbjct: 5 SSTSSEEDENFIKDVEDQKVLEVLTSHSKFKSLDDLVELRW 45
>AF040645-1|AAB94973.1| 377|Caenorhabditis elegans Hypothetical
protein F52C6.5 protein.
Length = 377
Score = 26.2 bits (55), Expect = 3.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = +1
Query: 1 LIRHEGWISPCHDEF 45
LIR E W S C+DEF
Sbjct: 316 LIRWENWASRCNDEF 330
>U55854-2|AAA98011.2| 1427|Caenorhabditis elegans Phospholipase d
protein 1 protein.
Length = 1427
Score = 25.8 bits (54), Expect = 4.6
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -2
Query: 205 SNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLF 95
+ WF+D +T +++ D++ +I W+ P ++
Sbjct: 528 AKWFVDAKTYMEYAADMMELAREEIYITDWWLSPEIY 564
>AC006762-6|ABJ99063.1| 547|Caenorhabditis elegans Hypothetical
protein Y42G9A.6b protein.
Length = 547
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 258 RPFLRASVFLRTRAREWTATGFLTTRPSLIILRMFCLELVLAI 130
RP AS F + RA W A+ + P+L+ ++ F +++AI
Sbjct: 262 RPRFGASFFQQIRALTWRASKTVLREPTLLKVQTF-QSIIIAI 303
>AC006762-5|AAF60553.2| 684|Caenorhabditis elegans Hypothetical
protein Y42G9A.6a protein.
Length = 684
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/43 (32%), Positives = 24/43 (55%)
Frame = -3
Query: 258 RPFLRASVFLRTRAREWTATGFLTTRPSLIILRMFCLELVLAI 130
RP AS F + RA W A+ + P+L+ ++ F +++AI
Sbjct: 399 RPRFGASFFQQIRALTWRASKTVLREPTLLKVQTF-QSIIIAI 440
>AB028889-1|BAA97571.1| 1427|Caenorhabditis elegans phospholipase D
protein.
Length = 1427
Score = 25.8 bits (54), Expect = 4.6
Identities = 8/37 (21%), Positives = 20/37 (54%)
Frame = -2
Query: 205 SNWFLDDQTILDHLTDVLSGISISDFIDLVWIKPHLF 95
+ WF+D +T +++ D++ +I W+ P ++
Sbjct: 528 AKWFVDAKTYMEYAADMMELAREEIYITDWWLSPEIY 564
>Z72512-1|CAA96663.2| 326|Caenorhabditis elegans Hypothetical
protein R07B5.3 protein.
Length = 326
Score = 25.4 bits (53), Expect = 6.1
Identities = 16/49 (32%), Positives = 23/49 (46%)
Frame = -3
Query: 180 PSLIILRMFCLELVLAISLISFGSSHTFFLPHRITEAASLFCNFRELIM 34
PS IL FC L A S++ + +F + LFC+ R LI+
Sbjct: 90 PSTTILTYFCATLDPAESIVPLLVAVYYFSNYSSQLYTVLFCSTRTLIL 138
>Z46795-7|CAO82048.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1169 DEQEVRNRMSRLIDGVEVDDFVNLI 1193
>Z46795-5|CAA86789.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1191 DEQEVRNRMSRLIDGVEVDDFVNLI 1215
>Z46795-4|CAM82783.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 982 DEQEVRNRMSRLIDGVEVDDFVNLI 1006
>Z46795-3|CAM82782.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1289 DEQEVRNRMSRLIDGVEVDDFVNLI 1313
>Z46792-9|CAO82020.1| 2371|Caenorhabditis elegans Hypothetical protein
C52A11.4f protein.
Length = 2371
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1169 DEQEVRNRMSRLIDGVEVDDFVNLI 1193
>Z46792-7|CAA86769.5| 2393|Caenorhabditis elegans Hypothetical protein
C52A11.4a protein.
Length = 2393
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1191 DEQEVRNRMSRLIDGVEVDDFVNLI 1215
>Z46792-6|CAM82812.2| 2184|Caenorhabditis elegans Hypothetical protein
C52A11.4e protein.
Length = 2184
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 982 DEQEVRNRMSRLIDGVEVDDFVNLI 1006
>Z46792-5|CAM82811.2| 2491|Caenorhabditis elegans Hypothetical protein
C52A11.4d protein.
Length = 2491
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1289 DEQEVRNRMSRLIDGVEVDDFVNLI 1313
>Z46792-2|CAL44970.3| 2202|Caenorhabditis elegans Hypothetical protein
C52A11.4c protein.
Length = 2202
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 1000 DEQEVRNRMSRLIDGVEVDDFVNLI 1024
>U55365-9|AAA98574.1| 346|Caenorhabditis elegans Hypothetical
protein C12D5.9 protein.
Length = 346
Score = 25.4 bits (53), Expect = 6.1
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = -2
Query: 265 TVTSFPARLCVFANTSAGMDSNWFLDDQTILDHLTDVLSGISISDFIDLVW 113
T TS+ + N S+ M N FL+D+ + + + G +I + D W
Sbjct: 287 TSTSYKCVIDSLLNPSSTMPRNSFLEDKECMRTMMGGICGAAILENFDRDW 337
>U42835-1|AAA83585.1| 87|Caenorhabditis elegans Hypothetical
protein C04F6.2 protein.
Length = 87
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/47 (27%), Positives = 24/47 (51%)
Frame = -3
Query: 252 FLRASVFLRTRAREWTATGFLTTRPSLIILRMFCLELVLAISLISFG 112
F +VFL + + +L+ +P+L+ F ++L I L+ FG
Sbjct: 32 FPGTNVFLYLKHKASKTFAYLSGKPALMNFISFVVQLACCIFLLDFG 78
>DQ823041-1|ABH03415.1| 2166|Caenorhabditis elegans MPZ-1 protein.
Length = 2166
Score = 25.4 bits (53), Expect = 6.1
Identities = 6/25 (24%), Positives = 18/25 (72%)
Frame = -2
Query: 190 DDQTILDHLTDVLSGISISDFIDLV 116
D+Q + + ++ ++ G+ + DF++L+
Sbjct: 960 DEQEVRNRMSRLIDGVEVDDFVNLI 984
>AL132865-7|CAB60598.1| 234|Caenorhabditis elegans Hypothetical
protein Y62E10A.10 protein.
Length = 234
Score = 25.4 bits (53), Expect = 6.1
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = -3
Query: 210 WTATGFLTTRPSLIILRMFCLELVLAISLISFGSS 106
WT +GF+TTR + F L + L+S S+
Sbjct: 128 WTFSGFVTTRVPFPLTLKFKAMLQRGVDLVSLDSA 162
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 68 QASSVTLGNSSWHGEIQP 15
+ASS +L NSSW+ + P
Sbjct: 1029 RASSASLANSSWYEHVPP 1046
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 68 QASSVTLGNSSWHGEIQP 15
+ASS +L NSSW+ + P
Sbjct: 1023 RASSASLANSSWYEHVPP 1040
>Z81056-7|CAB02909.1| 309|Caenorhabditis elegans Hypothetical
protein F09F3.13 protein.
Length = 309
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -2
Query: 169 HLTDVLSGISISDFIDLVWIK 107
HLTD+++ I I + D VW +
Sbjct: 231 HLTDLINSIFIFELSDKVWFR 251
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 175 LDHLTDVLSGISISDFIDLVWIKP 104
+D TDVL +SI + +++ W P
Sbjct: 1032 IDAPTDVLPSVSIDNTVNITWSPP 1055
>U00054-2|AAA50715.2| 13100|Caenorhabditis elegans Hypothetical
protein K07E12.1a protein.
Length = 13100
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 175 LDHLTDVLSGISISDFIDLVWIKP 104
+D TDVL +SI + +++ W P
Sbjct: 1095 IDAPTDVLPSVSIDNTVNITWSPP 1118
>AY117398-1|AAM78593.1| 13100|Caenorhabditis elegans mesocentin
protein.
Length = 13100
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = -2
Query: 175 LDHLTDVLSGISISDFIDLVWIKP 104
+D TDVL +SI + +++ W P
Sbjct: 1095 IDAPTDVLPSVSIDNTVNITWSPP 1118
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 68 QASSVTLGNSSWHGEIQP 15
+ASS +L NSSW+ + P
Sbjct: 1029 RASSASLANSSWYEHVPP 1046
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 68 QASSVTLGNSSWHGEIQP 15
+ASS +L NSSW+ + P
Sbjct: 1023 RASSASLANSSWYEHVPP 1040
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 68 QASSVTLGNSSWHGEIQP 15
+ASS +L NSSW+ + P
Sbjct: 1023 RASSASLANSSWYEHVPP 1040
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 25.0 bits (52), Expect = 8.0
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -1
Query: 68 QASSVTLGNSSWHGEIQP 15
+ASS +L NSSW+ + P
Sbjct: 1029 RASSASLANSSWYEHVPP 1046
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,650,414
Number of Sequences: 27780
Number of extensions: 116584
Number of successful extensions: 430
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 430
length of database: 12,740,198
effective HSP length: 69
effective length of database: 10,823,378
effective search space used: 248937694
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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