Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E11
         (278 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    21   2.8  
DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride...    21   3.7  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    20   4.9  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    20   6.5  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              19   8.6  
DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholi...    19   8.6  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    19   8.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    19   8.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    19   8.6  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     19   8.6  

>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 156 FCLELVLAISLISFGSSHTFFLPHRITEAASL 61
           + + L+L   LISF     F+LP    E  +L
Sbjct: 236 YTVNLILPTVLISFLCVLVFYLPAEAGEKVTL 267


>DQ667192-1|ABG75744.1|  489|Apis mellifera pH-sensitive chloride
           channel variant 4 protein.
          Length = 489

 Score = 20.6 bits (41), Expect = 3.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +1

Query: 37  DEFPKVTEEACSLC 78
           DEF +  +  CSLC
Sbjct: 264 DEFDEFGDSKCSLC 277


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 20.2 bits (40), Expect = 4.9
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +1

Query: 181 SGRQETSCCPFPRSCSQKHRG 243
           +G+  +  CP PRS   K  G
Sbjct: 374 NGQTHSQLCPTPRSTHLKVSG 394


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 19.8 bits (39), Expect = 6.5
 Identities = 6/20 (30%), Positives = 10/20 (50%)
 Frame = -2

Query: 235 VFANTSAGMDSNWFLDDQTI 176
           V+     GM+  WF   +T+
Sbjct: 383 VYNGDEIGMEDRWFTYQETV 402


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +2

Query: 98  KVWLDPNEINEI 133
           +++LD NE+N++
Sbjct: 89  EIYLDENEVNKL 100


>DQ026031-1|AAY87890.1|  601|Apis mellifera nicotinic acetylcholine
           receptor alpha1subunit protein.
          Length = 601

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = -3

Query: 156 FCLELVLAISLISFGSSHTFFLPHRITEAASL 61
           + + L++    ISF S   F+LP    E  SL
Sbjct: 239 YTVNLIIPCVGISFLSVLVFYLPSDSGEKVSL 270


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 8/30 (26%), Positives = 14/30 (46%)
 Frame = -3

Query: 213 EWTATGFLTTRPSLIILRMFCLELVLAISL 124
           +W     +  R  LII  +F +   +A+ L
Sbjct: 518 DWKFAAMVIDRMCLIIFTLFTIIATIAVLL 547


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 170 IKDGLVVKKPVAVH 211
           +KDG+V+   + VH
Sbjct: 286 VKDGIVLATGITVH 299


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 6/14 (42%), Positives = 10/14 (71%)
 Frame = +2

Query: 170 IKDGLVVKKPVAVH 211
           +KDG+V+   + VH
Sbjct: 286 VKDGIVLATGITVH 299


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 19.4 bits (38), Expect = 8.6
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = -3

Query: 213 EWTATGFLTTRPSL 172
           +W+  GFL TR S+
Sbjct: 156 KWSRKGFLRTRWSI 169


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,865
Number of Sequences: 438
Number of extensions: 1238
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)