Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E10
         (243 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069415-1|AAL39560.1|  269|Drosophila melanogaster LD11064p pro...    27   2.6  
AJ318090-1|CAC41645.1|  672|Drosophila melanogaster nuclear RNA ...    27   2.6  
AJ251947-1|CAB64382.2|  672|Drosophila melanogaster tip associat...    27   2.6  
AE014298-1507|AAF47959.3|  672|Drosophila melanogaster CG1664-PA...    27   2.6  
J02788-2|AAA28707.1|  264|Drosophila melanogaster protein ( D.me...    27   3.5  

>AY069415-1|AAL39560.1|  269|Drosophila melanogaster LD11064p
           protein.
          Length = 269

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 239 FNRNWFREQTNKQTHRQKNLNYGNMYC 159
           FNRN  R   N + +R +NL YG + C
Sbjct: 21  FNRN-LRRLLNGEENRTRNLKYGRLAC 46


>AJ318090-1|CAC41645.1|  672|Drosophila melanogaster nuclear RNA
           export factor 1 (NXF1) protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 239 FNRNWFREQTNKQTHRQKNLNYGNMYC 159
           FNRN  R   N + +R +NL YG + C
Sbjct: 424 FNRN-LRRLLNGEENRTRNLKYGRLAC 449


>AJ251947-1|CAB64382.2|  672|Drosophila melanogaster tip associating
           protein protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 239 FNRNWFREQTNKQTHRQKNLNYGNMYC 159
           FNRN  R   N + +R +NL YG + C
Sbjct: 424 FNRN-LRRLLNGEENRTRNLKYGRLAC 449


>AE014298-1507|AAF47959.3|  672|Drosophila melanogaster CG1664-PA
           protein.
          Length = 672

 Score = 27.5 bits (58), Expect = 2.6
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -2

Query: 239 FNRNWFREQTNKQTHRQKNLNYGNMYC 159
           FNRN  R   N + +R +NL YG + C
Sbjct: 424 FNRN-LRRLLNGEENRTRNLKYGRLAC 449


>J02788-2|AAA28707.1|  264|Drosophila melanogaster protein (
           D.melanogaster myosinheavy chain gene, 5' end. ).
          Length = 264

 Score = 27.1 bits (57), Expect = 3.5
 Identities = 10/16 (62%), Positives = 14/16 (87%)
 Frame = +2

Query: 26  VNNIIQRFSYKLIYTY 73
           ++N+ QR+ YKLIYTY
Sbjct: 103 LHNLRQRYYYKLIYTY 118


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,950,357
Number of Sequences: 53049
Number of extensions: 110695
Number of successful extensions: 205
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 202
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)