Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E09
(446 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_04_0377 + 17086775-17088310 133 5e-32
08_02_0974 + 23200053-23200167,23200184-23200665 73 8e-14
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 32 0.18
08_02_0386 - 16575636-16575698,16575799-16575858,16575947-165762... 32 0.24
06_03_0084 - 16386962-16387033,16387124-16387175,16387252-163873... 32 0.24
04_04_0765 - 27910189-27912393,27912521-27912598 32 0.24
11_06_0601 + 25407591-25407920 31 0.32
09_02_0543 + 10427321-10428315,10428440-10429154 31 0.32
08_02_0880 + 22203440-22204324,22204763-22204876,22204964-222054... 31 0.56
01_05_0040 - 17492625-17492744,17493106-17493411 29 1.3
01_01_1202 - 9681836-9683146 29 1.3
02_04_0278 - 21507288-21507726,21507893-21507972,21508587-215088... 29 1.7
11_06_0603 + 25416922-25417251 29 2.3
09_02_0109 - 4372621-4373024,4373498-4373760,4373988-4374157 29 2.3
05_07_0240 + 28606345-28607316 29 2.3
02_05_0656 + 30671152-30671227,30671330-30671464,30671591-306716... 29 2.3
04_04_1655 - 35089916-35091157 28 3.0
02_05_0862 - 32305562-32305654,32305935-32306033,32306178-323062... 28 3.0
01_06_0482 - 29672720-29673854,29673941-29676267 28 3.0
06_01_0179 - 1388602-1389572,1390060-1390129,1390346-1390439,139... 28 3.9
06_01_0008 + 141405-142421 28 3.9
05_07_0356 + 29529422-29529517,29529613-29530200 28 3.9
02_05_1167 - 34638709-34639104,34640653-34642158 28 3.9
11_06_0605 + 25425964-25426293 27 5.2
08_02_0479 + 17627605-17627839,17628965-17629107,17630018-176301... 27 5.2
05_03_0614 - 16206005-16206586,16207585-16207608,16209746-162098... 27 5.2
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 27 6.9
04_04_1400 - 33259716-33260069,33260172-33260219,33260471-332605... 27 6.9
04_04_1236 + 31990128-31990268,31990291-31990674,31991284-31991469 27 6.9
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 27 6.9
02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258 27 6.9
02_02_0203 + 7750479-7750700,7750828-7751019,7751748-7752299 27 6.9
10_08_0799 - 20650799-20650947,20651022-20651114,20651906-206519... 27 9.1
09_06_0147 + 21195222-21195377,21195471-21195522,21196842-212043... 27 9.1
03_06_0521 + 34493682-34494041 27 9.1
02_05_0686 - 30900748-30902167,30903442-30904742 27 9.1
02_02_0135 + 7096911-7098440 27 9.1
>09_04_0377 + 17086775-17088310
Length = 511
Score = 133 bits (322), Expect = 5e-32
Identities = 63/101 (62%), Positives = 82/101 (81%)
Frame = +1
Query: 142 GPTPRVGPALGHKDFGRALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVM 321
GP P + A GH +G AL PGEG A+A YV +GKRIPRRGE+GL+++EI +E +GYVM
Sbjct: 382 GPMP-LPRAEGHISYGGALRPGEGDAIAQYVQQGKRIPRRGEVGLSAEEIQKFEDLGYVM 440
Query: 322 SGSRHRRMEAVRIRKENQIYSADEKRALAAFSKEERAK*EN 444
SGSRH+RM A+RIRKENQ+YSA++KRALA F+ EE++K E+
Sbjct: 441 SGSRHQRMNAIRIRKENQVYSAEDKRALAMFNYEEKSKREH 481
>08_02_0974 + 23200053-23200167,23200184-23200665
Length = 198
Score = 73.3 bits (172), Expect = 8e-14
Identities = 33/45 (73%), Positives = 41/45 (91%)
Frame = +1
Query: 310 GYVMSGSRHRRMEAVRIRKENQIYSADEKRALAAFSKEERAK*EN 444
GYVMSGSRH R+ AVR+RKENQ+YSA+EKRALAAF+ E+RA+ E+
Sbjct: 124 GYVMSGSRHARITAVRLRKENQVYSAEEKRALAAFNSEQRARRES 168
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 32.3 bits (70), Expect = 0.18
Identities = 35/128 (27%), Positives = 50/128 (39%), Gaps = 3/128 (2%)
Frame = +1
Query: 61 EKGKEHEVEALSSIKSKSEDELASEAYGPTPRVGPAL-GHKDFGR--ALLPGEGAAMAAY 231
+KGK+ A +KS D E G P G AL G GR + G+ AA AA
Sbjct: 565 KKGKKPSHRATRFVKSNGVDSDDEEIVGRVPEFGLALPGTSTSGRGSVRVAGDAAATAAG 624
Query: 232 VAEGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKENQIYSADEKRALAA 411
+ + G G +S S G + HRR++ + +R A E++
Sbjct: 625 TSSSSPAAQAGVAGSSS----SGRRRGRSPADKEHRRLKRL-LRNRVSAQQARERKKAYM 679
Query: 412 FSKEERAK 435
E R K
Sbjct: 680 SELEARVK 687
>08_02_0386 -
16575636-16575698,16575799-16575858,16575947-16576239,
16576361-16576517,16576601-16576948,16577047-16577177,
16577417-16577882,16578425-16579132
Length = 741
Score = 31.9 bits (69), Expect = 0.24
Identities = 18/36 (50%), Positives = 21/36 (58%)
Frame = +3
Query: 252 PQERGDRAHVGRDRLVRSRGLRDERQPAPPHGGGSN 359
P R RA +G R VRS L D R P+P GGGS+
Sbjct: 71 PGGRTRRAVLGIIRKVRSLELSDPRTPSPNGGGGSS 106
>06_03_0084 -
16386962-16387033,16387124-16387175,16387252-16387313,
16387509-16387543,16387637-16387679,16388610-16388692,
16388829-16388917,16390415-16390681,16391370-16391446,
16391546-16391677,16391802-16391870,16392464-16392529,
16392603-16392773,16392848-16392916,16393005-16393086,
16393175-16393219,16393535-16393659,16394271-16394525,
16396561-16396722
Length = 651
Score = 31.9 bits (69), Expect = 0.24
Identities = 22/57 (38%), Positives = 27/57 (47%)
Frame = +1
Query: 154 RVGPALGHKDFGRALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVMS 324
R GP RA LP E + EGK I RRG +TSD IA E + ++S
Sbjct: 520 RSGPLFRQMKDPRAHLPVEPEEQS----EGKVIQRRGRFQVTSDSIAQKEVISRLIS 572
>04_04_0765 - 27910189-27912393,27912521-27912598
Length = 760
Score = 31.9 bits (69), Expect = 0.24
Identities = 26/73 (35%), Positives = 33/73 (45%), Gaps = 1/73 (1%)
Frame = -1
Query: 302 SYEAISSDVSPISPLLGMRFPSATYAAMAAPSPGNSARPKS-LCPSAGPTRGVGPYASDA 126
S A+ S V SP+ +P + ++ PS G A P S LC P G AS A
Sbjct: 475 SLAAVVSPVCATSPVAAC-YPPTASSLLSGPSGGGPAFPASPLCSRRSPLLADGIAASYA 533
Query: 125 NSSSLFDFIELKA 87
+ LF F EL A
Sbjct: 534 EPTGLF-FDELDA 545
>11_06_0601 + 25407591-25407920
Length = 109
Score = 31.5 bits (68), Expect = 0.32
Identities = 19/60 (31%), Positives = 32/60 (53%)
Frame = +1
Query: 76 HEVEALSSIKSKSEDELASEAYGPTPRVGPALGHKDFGRALLPGEGAAMAAYVAEGKRIP 255
HE++ + + E ELA YG + R GPA+ G +L+ G MA ++ +G+ +P
Sbjct: 42 HELDR-DPLGKEMEKELARRLYGSSGRGGPAVPAVFIGGSLVGGTSKVMAMHL-KGELVP 99
>09_02_0543 + 10427321-10428315,10428440-10429154
Length = 569
Score = 31.5 bits (68), Expect = 0.32
Identities = 27/110 (24%), Positives = 46/110 (41%), Gaps = 3/110 (2%)
Frame = +1
Query: 70 KEHEVEALSSIKSKSEDELASEAYGPTPRVGPALGHKDFGRALL---PGEGAAMAAYVAE 240
++ E AL + S + E YG P ++G ++ P GAA VA
Sbjct: 159 RDAEAGALEPVASSAGPNHGKE-YGGDPAAAAGPRQYEYGERVVSDGPRHGAAYNELVAA 217
Query: 241 GKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKENQIYSAD 390
G R+ GE+ + + A E +G GS ++ A + + +S+D
Sbjct: 218 GPRLYEYGELAAATRDFAEEEKLGRGGFGSVYQGRLAGGVEVAIKKFSSD 267
>08_02_0880 +
22203440-22204324,22204763-22204876,22204964-22205455,
22205646-22205819,22206589-22206978,22209927-22210022,
22210645-22210760,22210872-22211042,22211126-22211285,
22211388-22211573,22211665-22211793,22211918-22211996,
22212159-22212268
Length = 1033
Score = 30.7 bits (66), Expect = 0.56
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +2
Query: 149 RRVWAQRWDTRTSVARCCRAREPPWPRTW 235
R W +RW R + AR A E W R W
Sbjct: 388 RNDWRRRWSPRRAAARAQVAAEENWRRAW 416
>01_05_0040 - 17492625-17492744,17493106-17493411
Length = 141
Score = 29.5 bits (63), Expect = 1.3
Identities = 18/35 (51%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Frame = +1
Query: 58 VEK-GKEHEVEALSSIKSKSEDELASEAYGPTPRV 159
VEK KEHEV K DELA E Y PT V
Sbjct: 85 VEKDSKEHEVAPCDGHIEKMVDELAREEYIPTDEV 119
>01_01_1202 - 9681836-9683146
Length = 436
Score = 29.5 bits (63), Expect = 1.3
Identities = 24/87 (27%), Positives = 36/87 (41%), Gaps = 1/87 (1%)
Frame = +1
Query: 91 LSSIKSKSEDELASEAYGPTPRVGPALGHKDFGRALLPGEGAAMA-AYVAEGKRIPRRGE 267
L + S +DEL + Y P VGPA G + A+ E +A + G + R +
Sbjct: 191 LVELASSRDDELPALVYESRPTVGPASGSSSYASAMGSVEMQPVADPGRSGGNQYDRVEQ 250
Query: 268 IGLTSDEIASYEAVGYVMSGSRHRRME 348
+S + VG S R R +E
Sbjct: 251 EDDSSRAVVEMRDVGGSRSSIRERNLE 277
>02_04_0278 -
21507288-21507726,21507893-21507972,21508587-21508840,
21508988-21509180
Length = 321
Score = 29.1 bits (62), Expect = 1.7
Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Frame = -1
Query: 293 AISSDVSPISPLLGMRFPSATYAAMAAPSPGNSARPKSLCPSAGPTR-GVGPYAS 132
A S SP G P+A AA A PSPG + P S G R GP+A+
Sbjct: 253 AASESFSP-RVFAGGGAPAAITAAAAVPSPGAGSPPSSSAALFGARRPHFGPFAA 306
>11_06_0603 + 25416922-25417251
Length = 109
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 76 HEVEALSSIKSKSEDELASEAYGPTPRVGPALGHKDFGRALLPGEGAAMAAYVAEGKRIP 255
HE++ + + E ELA YG R GPA+ G +L+ G M ++ +G+ +P
Sbjct: 42 HELDR-EPLGKEMERELARRLYGSGGRGGPAVPAVFIGGSLVGGTSKVMTVHL-KGELVP 99
>09_02_0109 - 4372621-4373024,4373498-4373760,4373988-4374157
Length = 278
Score = 28.7 bits (61), Expect = 2.3
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 3/37 (8%)
Frame = -3
Query: 285 VRREPDLPSPGDALPLGHV---RGHGGSLARQQRATE 184
+RR+P PSP A H+ GHGG L R++R +
Sbjct: 75 LRRKPSRPSPALAPAARHLLASPGHGGRLERRRRCMQ 111
>05_07_0240 + 28606345-28607316
Length = 323
Score = 28.7 bits (61), Expect = 2.3
Identities = 22/57 (38%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 281 DVSPISPLLG--MRFPSATYAAMAAPSPGNSARPKSLCPSAGPTRGVGPYASDANSS 117
D SP+SP L PSA AA A P+P +A S P P++SD N S
Sbjct: 3 DQSPLSPNLHPLSPSPSAAAAAAATPTPAAAAASSRSSRSKKP-----PHSSDPNQS 54
>02_05_0656 +
30671152-30671227,30671330-30671464,30671591-30671676,
30672184-30672278,30672431-30672556,30672659-30672809
Length = 222
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/58 (34%), Positives = 27/58 (46%)
Frame = +1
Query: 202 PGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRMEAVRIRKENQ 375
PG+ A +E K + + IG D + EAV V GS ++ A RI ENQ
Sbjct: 167 PGDYTGWVAASSEWKILYK---IGKDKDGLLRKEAVREVYDGSLFTKLAAARINDENQ 221
>04_04_1655 - 35089916-35091157
Length = 413
Score = 28.3 bits (60), Expect = 3.0
Identities = 30/94 (31%), Positives = 42/94 (44%)
Frame = +1
Query: 142 GPTPRVGPALGHKDFGRALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVM 321
GP R G L R EG A A V+ G + G L E+AS +AV +
Sbjct: 287 GPVERRGCELALAALDRMCGCAEGRA--ALVSHGAGVAVVGRKVLRVSEVASEKAVRVLR 344
Query: 322 SGSRHRRMEAVRIRKENQIYSADEKRALAAFSKE 423
S +RH AV +++ Q A EK + A S++
Sbjct: 345 SVARHAATAAV-VQEMGQT-GAVEKLCVVAQSEQ 376
>02_05_0862 -
32305562-32305654,32305935-32306033,32306178-32306259,
32307407-32307764,32308745-32309521,32309612-32309716,
32309803-32309911,32311016-32311024
Length = 543
Score = 28.3 bits (60), Expect = 3.0
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = -1
Query: 221 MAAPSPGNSARPKSLCPSAGPTRGV-GPYASDANSSSLFDFIELKASTSCSFPFSTHI 51
M+AP+P + RPKS G G+ G YA+ + FD + A+ + PFS +
Sbjct: 214 MSAPAP-HHRRPKSKSGPLGHPGGIPGAYAAASPFVPCFDGVLAAANFAAHSPFSAGV 270
>01_06_0482 - 29672720-29673854,29673941-29676267
Length = 1153
Score = 28.3 bits (60), Expect = 3.0
Identities = 21/53 (39%), Positives = 26/53 (49%)
Frame = -1
Query: 221 MAAPSPGNSARPKSLCPSAGPTRGVGPYASDANSSSLFDFIELKASTSCSFPF 63
+ APS N AR K + TR + P AS ++SSS ASTS S F
Sbjct: 52 LPAPSVANQARHKPRLKPSSSTRKLLPSASSSSSSS----AAAAASTSSSSSF 100
>06_01_0179 -
1388602-1389572,1390060-1390129,1390346-1390439,
1390587-1390687,1391152-1391220,1391328-1391482,
1392193-1392241,1392611-1392739,1392825-1393580,
1394711-1394902
Length = 861
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/45 (40%), Positives = 25/45 (55%)
Frame = -1
Query: 212 PSPGNSARPKSLCPSAGPTRGVGPYASDANSSSLFDFIELKASTS 78
P + + P S S+GP+ GV +DAN SSL +L+ STS
Sbjct: 91 PRDMHGSIPISTTNSSGPSIGVSSLVTDAN-SSLSGGAQLQPSTS 134
>06_01_0008 + 141405-142421
Length = 338
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -1
Query: 311 PTASYEAISSDVSPISPLLGMRFPSATYAAMAAPSPGNSAR 189
P +E + D P LG P+A +A A+PSP R
Sbjct: 240 PVCRFELPTDDPHHAHPTLGSHRPAAPASASASPSPAPPPR 280
>05_07_0356 + 29529422-29529517,29529613-29530200
Length = 227
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -1
Query: 236 ATYAAMAAPSPGNSARPKSLCPSAGPTRGVGPYASDANSSS 114
A+ +A SP + P+SL S PT G A ++S S
Sbjct: 74 ASISASGGGSPSPTPSPRSLITSCSPTAAAGSSAGSSSSIS 114
>02_05_1167 - 34638709-34639104,34640653-34642158
Length = 633
Score = 27.9 bits (59), Expect = 3.9
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +1
Query: 175 HKDFGRALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRR 342
H A++ + A++ VA R+PR GE+ + IA EAV +S + RR
Sbjct: 9 HSPAHLAVVRRDHASLRRLVAGLPRLPRAGEVATEEESIAG-EAVADAVSAAIDRR 63
>11_06_0605 + 25425964-25426293
Length = 109
Score = 27.5 bits (58), Expect = 5.2
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +1
Query: 76 HEVEALSSIKSKSEDELASEAYGPTPRVGPALGHKDFGRALLPGEGAAMAAYVAEGKRIP 255
HE++ + + E ELA YG R GPA+ G +L+ MA ++ +G+ +P
Sbjct: 42 HELDR-EPLGKEMERELARRLYGSGGRGGPAVPAVFIGGSLVGSTSKVMAMHL-KGELVP 99
>08_02_0479 +
17627605-17627839,17628965-17629107,17630018-17630137,
17630497-17630721
Length = 240
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/41 (39%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
Frame = -1
Query: 296 EAISSDVSPISPLLGMRFPSAT-YAAMAAPSPGNSARPKSL 177
EA +D+ + L + P + YAA AAPSP +A P L
Sbjct: 2 EAPGADIQALIQRLRLHRPRPSPYAAAAAPSPDAAAPPAEL 42
>05_03_0614 -
16206005-16206586,16207585-16207608,16209746-16209879,
16210703-16210832
Length = 289
Score = 27.5 bits (58), Expect = 5.2
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 7/45 (15%)
Frame = -1
Query: 311 PTASYEAISSDVSPISP-------LLGMRFPSATYAAMAAPSPGN 198
PT+S A++S +P+SP + G FP+ T +A+A S N
Sbjct: 214 PTSSSMAMTSSPAPLSPPSIASILISGSHFPTPTTSALALTSSSN 258
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 27.1 bits (57), Expect = 6.9
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = -1
Query: 227 AAMAAPSPGNSARPKSLCPSAGPTRGVGPYASDANSSSLFDFI 99
AA+ P P +A+P ++ P GP+ P +D S+ F+ +
Sbjct: 84 AALPPPPPAAAAQP-AVAPLPGPSGATHPTENDCAQSNRFNSV 125
>04_04_1400 -
33259716-33260069,33260172-33260219,33260471-33260596,
33260850-33260900,33260963-33261055,33261217-33261272,
33261465-33261522,33262306-33262365,33262513-33262623,
33263368-33263949,33264026-33264097
Length = 536
Score = 27.1 bits (57), Expect = 6.9
Identities = 20/81 (24%), Positives = 39/81 (48%)
Frame = +1
Query: 166 ALGHKDFGRALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVMSGSRHRRM 345
A+ ++ A L GE A++ +AE ++ + L + I + EAV RM
Sbjct: 186 AIAEREEAVAKLEGEKASLEKLLAEREKEQAQEASELQNSMIETMEAVEMEKQRHHSTRM 245
Query: 346 EAVRIRKENQIYSADEKRALA 408
EA+ + ++ +A+ ++LA
Sbjct: 246 EALARLAKLEVTNAELAKSLA 266
>04_04_1236 + 31990128-31990268,31990291-31990674,31991284-31991469
Length = 236
Score = 27.1 bits (57), Expect = 6.9
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 178 KDFGRALLPGEGAAMAAYVAEGKRIPRRGEIGLTSDEIASYEAVGYVMSGSR 333
+DFGRA +P G AA R + G + ++A++EAV ++ S R
Sbjct: 150 RDFGRARVPDTGGGRAAARYHTSRF-KVGSSVQEAKQMAAWEAVTFLRSRFR 200
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 27.1 bits (57), Expect = 6.9
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -2
Query: 121 RPRSSILLNLKLQPHALFLFQPIFPLRNLT 32
R R SI L ++PH LF+ +P++ L +++
Sbjct: 225 RRRLSIARELVMRPHVLFIDEPLYHLDSVS 254
>02_04_0117 + 19914704-19915830,19916575-19916860,19917047-19918258
Length = 874
Score = 27.1 bits (57), Expect = 6.9
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 4/58 (6%)
Frame = -3
Query: 267 LPSPGDALPL-GHVRGHGGSLARQQRATEVLVS---QRWAHTRRGTVRFGCQFVLALR 106
LP+ A PL GH GHG + + LV+ + AH RRG+V Q VLA++
Sbjct: 42 LPASAGASPLLGH--GHGVGVYYPPSLSNALVAAFKRAQAHQRRGSVETQQQPVLAVK 97
>02_02_0203 + 7750479-7750700,7750828-7751019,7751748-7752299
Length = 321
Score = 27.1 bits (57), Expect = 6.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 209 SPGNSARPKSLCPSAGPTRGVGPYASDANSSSLFD 105
SPG + R + +CP++G + P DA SS FD
Sbjct: 217 SPGFAVRRRQVCPASGGDGNLAPL--DALSSVRFD 249
>10_08_0799 -
20650799-20650947,20651022-20651114,20651906-20651934,
20652039-20652097,20652170-20652283,20652374-20652534,
20652544-20652663,20652741-20653469,20654980-20655244
Length = 572
Score = 26.6 bits (56), Expect = 9.1
Identities = 17/33 (51%), Positives = 19/33 (57%)
Frame = -1
Query: 242 PSATYAAMAAPSPGNSARPKSLCPSAGPTRGVG 144
P A AA AA SP SA PS+GPT G+G
Sbjct: 104 PPAGSAAPAAASPQASA-----APSSGPTDGLG 131
>09_06_0147 + 21195222-21195377,21195471-21195522,21196842-21204362,
21204453-21205031,21205176-21205484,21205638-21205718,
21205971-21206279,21207430-21207816,21207964-21208767,
21208856-21209218,21209437-21209667,21209934-21210278,
21210494-21210712,21210759-21210815,21210978-21211322,
21211538-21211756,21211803-21211859,21212022-21212366,
21212584-21212814,21213100-21213458
Length = 4322
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/66 (30%), Positives = 29/66 (43%)
Frame = -1
Query: 308 TASYEAISSDVSPISPLLGMRFPSATYAAMAAPSPGNSARPKSLCPSAGPTRGVGPYASD 129
T S +A + D +SP L R+PSA + + P +S + T GP S
Sbjct: 2117 TPSKKAANDDAPSVSPPLPTRYPSAEDTSKQSIRPQDSRDVFREQKAVDSTSSPGPSDSL 2176
Query: 128 ANSSSL 111
S+SL
Sbjct: 2177 RASASL 2182
>03_06_0521 + 34493682-34494041
Length = 119
Score = 26.6 bits (56), Expect = 9.1
Identities = 18/52 (34%), Positives = 23/52 (44%)
Frame = -1
Query: 254 GMRFPSATYAAMAAPSPGNSARPKSLCPSAGPTRGVGPYASDANSSSLFDFI 99
G R +A A A+ S RP + + G TRG A + SL DFI
Sbjct: 7 GSRVAAAGVAPSASSSSAGRRRPSRVAMAVGATRGKPAPAEE--EKSLADFI 56
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 26.6 bits (56), Expect = 9.1
Identities = 13/31 (41%), Positives = 15/31 (48%)
Frame = -1
Query: 248 RFPSATYAAMAAPSPGNSARPKSLCPSAGPT 156
RFPS A A P P S P P+A P+
Sbjct: 36 RFPSTRTPAFATPPPITSPSPSPGTPTATPS 66
>02_02_0135 + 7096911-7098440
Length = 509
Score = 26.6 bits (56), Expect = 9.1
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = -1
Query: 254 GMRFPSATYAAMAAPSPGNSARPKSLCPSAGPTRGVGPYASDANSSSLFDFIELKASTSC 75
G PS+ A APS S+ + + S T G G ++ S L ++L +S
Sbjct: 280 GSSRPSSCSVAGGAPSSAVSSNNQLIASSGEHTHGGGDASAQRLRSELLTMLQLVSS--- 336
Query: 74 SFPFSTHI 51
PFST +
Sbjct: 337 --PFSTRL 342
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,875,009
Number of Sequences: 37544
Number of extensions: 227951
Number of successful extensions: 1336
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 859680288
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -