Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E05
(379 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_03_0958 - 21241230-21241327,21241693-21241893,21241989-212421... 35 0.024
09_04_0180 + 15367737-15367755,15368874-15369739 32 0.13
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 31 0.40
09_02_0308 + 7137099-7137132,7137495-7137611,7138252-7138319,713... 24 1.1
07_03_1315 - 25722757-25722876,25722972-25723328,25723924-257245... 29 1.2
03_05_0058 + 20356902-20356928,20357328-20357786,20357888-203581... 29 1.6
11_06_0560 - 24978894-24979030,24979106-24979310,24979421-249797... 28 2.1
11_06_0053 + 19667076-19667774,19668001-19669803,19669911-19669928 28 2.8
11_06_0185 + 21018045-21022307 27 3.7
07_03_0750 - 21226896-21227011,21227116-21227370,21227469-212287... 27 3.7
05_05_0172 + 22944351-22944388,22947342-22947446,22947532-229475... 27 3.7
07_01_0115 + 851505-852368,852611-852730,853000-853020,853253-85... 27 6.5
03_02_0724 - 10718756-10718931,10719008-10719233,10719330-107194... 27 6.5
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 26 8.6
11_06_0289 - 21969248-21973516 26 8.6
10_06_0057 + 10143578-10143804,10144072-10144147,10144360-10144899 26 8.6
08_02_1605 - 28166338-28166418,28166496-28166567,28166655-281667... 26 8.6
07_03_0739 - 21096684-21096742,21096822-21097076,21097206-210984... 26 8.6
06_03_0850 - 25354002-25354391,25354480-25354575,25355352-253556... 26 8.6
04_04_1012 - 30104401-30104955,30105066-30106841 26 8.6
04_04_1005 - 30043698-30044252,30044363-30046138 26 8.6
03_05_0990 - 29503950-29504462,29504567-29504686,29514956-295150... 26 8.6
03_02_0504 - 8976973-8979414 26 8.6
>04_03_0958 -
21241230-21241327,21241693-21241893,21241989-21242110,
21242462-21242536,21242626-21242714,21242808-21242888,
21243552-21243674
Length = 262
Score = 34.7 bits (76), Expect = 0.024
Identities = 30/104 (28%), Positives = 47/104 (45%), Gaps = 3/104 (2%)
Frame = +3
Query: 45 MHKTQEVYMLLEKYRIGNLHDNDVVDHSD-DELWVKEPIRDKRLIVKTAKPFNAEIPAKL 221
++KT + LL++ RI LH N ++ D + W EP+ + ++T + + I L
Sbjct: 57 INKTVAIVELLKR-RIVGLHQNTSIESIDITDTW--EPLEEGLNTLETTRHVSL-ITITL 112
Query: 222 QIQHFDTPKGGGDHPSP--EADHQADGDQDPRADPRGLGAGPAR 347
+ DT G P P + D DQ+ A P G G G R
Sbjct: 113 SKKELDTSSPGYQPPIPADQVRPPTDFDQEAEAVPSGRGRGRGR 156
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 32.3 bits (70), Expect = 0.13
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 1/80 (1%)
Frame = +3
Query: 105 DNDVVDHSDDELWVKEPIRDKRLIVKTAKPFNAEIPAKLQIQHFDTPKGGGDHPSPEADH 284
++DV++ ++D EP+ D + AE+ +L + TP PE D
Sbjct: 40 EDDVLELAEDP--ALEPLPDLDPEPEVEAELEAELELELLVPPIPTPAPSPIPRPPELDP 97
Query: 285 QADGDQDPRADPR-GLGAGP 341
+ + DP ADP+ GL P
Sbjct: 98 EPKAETDPEADPKPGLDPEP 117
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 30.7 bits (66), Expect = 0.40
Identities = 16/42 (38%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = +3
Query: 252 GGDHPSPEADHQADGDQDPRADPRG---LGAGPARIHTGSAD 368
GGD P PE HQA + P+ D G G G + +AD
Sbjct: 10 GGDEPPPEPHHQAGVQRPPKNDGDGGEEAGGGNVGVPAAAAD 51
>09_02_0308 +
7137099-7137132,7137495-7137611,7138252-7138319,
7138413-7138538,7138650-7139619,7139641-7139737,
7140026-7140113,7140336-7140396,7140425-7140447,
7140663-7140776,7141193-7141306,7144731-7144825,
7146506-7146824,7147166-7147309,7147463-7147564,
7147868-7147971,7148121-7148247,7148804-7148845,
7148939-7149091,7149326-7149426,7149807-7150227
Length = 1139
Score = 24.2 bits (50), Expect(2) = 1.1
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +3
Query: 246 KGGGDHPSPEADHQADGDQDPRADPRGLG 332
KGGG S E G DPR PR LG
Sbjct: 604 KGGG---SMECVRSGSGVLDPRCSPRFLG 629
Score = 23.4 bits (48), Expect(2) = 1.1
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 54 TQEVYMLLEKYRIGNLHDNDVVDHSDDEL 140
T VY +LE YR+ ++ V+ ++DE+
Sbjct: 558 TIPVYTVLEVYRVSDMELVRVIPSAEDEV 586
>07_03_1315 -
25722757-25722876,25722972-25723328,25723924-25724500,
25724577-25725265,25725487-25725822,25726190-25726527,
25726619-25726746,25726906-25727030,25727547-25727589,
25727714-25727802,25728396-25728511,25729157-25729276,
25729752-25729794
Length = 1026
Score = 29.1 bits (62), Expect = 1.2
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +3
Query: 54 TQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDKRLIVKTAKP 194
TQ + + +R+ + H VV++ DD+ + + + +K AKP
Sbjct: 785 TQAAARIFQAFRVESFHRKKVVEYGDDDCGLSDERTLSLVSIKNAKP 831
>03_05_0058 +
20356902-20356928,20357328-20357786,20357888-20358169,
20358188-20358505
Length = 361
Score = 28.7 bits (61), Expect = 1.6
Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +3
Query: 42 GMHKTQEVYMLLEKYRIGNLHDNDVVDHSDDELW-VKEPIRDKRLIVKTAKPFNAEIPAK 218
G K MLL+ + +G + V H W + E IR+ R++ K A + K
Sbjct: 151 GFTKDHVKAMLLDTF-VGGITTTSVTLH-----WAMSELIRNPRVMKKAQDEIRAVVGEK 204
Query: 219 LQIQHFDTPK 248
++QH D PK
Sbjct: 205 ERVQHHDMPK 214
>11_06_0560 -
24978894-24979030,24979106-24979310,24979421-24979748,
24980024-24980116,24980287-24980406,24982786-24982916
Length = 337
Score = 28.3 bits (60), Expect = 2.1
Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Frame = +3
Query: 237 DTPKGGGDHPSPEA----DHQADGDQDPRADPRGLGA 335
+ P GGGDH SP A DHQ + + R LGA
Sbjct: 7 EPPGGGGDHVSPPAAATRDHQQLPQVNGSSSSRALGA 43
>11_06_0053 + 19667076-19667774,19668001-19669803,19669911-19669928
Length = 839
Score = 27.9 bits (59), Expect = 2.8
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +3
Query: 126 SDDELWVKEPIRDK--RLIVKTAKPFNAEIPAKLQIQHFD 239
SD LWV EP +D+ RL++ PF+ KL + +
Sbjct: 715 SDLTLWVNEPTQDRHERLVIDNCYPFHCLTFLKLMANNME 754
>11_06_0185 + 21018045-21022307
Length = 1420
Score = 27.5 bits (58), Expect = 3.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +3
Query: 249 GGGDHPSPEADHQADGDQDPRADPRGLGAGPAR 347
GGG+ E D + DG+++ + + R + G R
Sbjct: 440 GGGERKEDEKDERGDGEEEGKEERRDMEKGEER 472
>07_03_0750 -
21226896-21227011,21227116-21227370,21227469-21228785,
21228918-21228984
Length = 584
Score = 27.5 bits (58), Expect = 3.7
Identities = 13/24 (54%), Positives = 14/24 (58%)
Frame = +2
Query: 173 NCEDSETIQCGNTCQAPNTTL*HA 244
N D IQ G TC APNT + HA
Sbjct: 406 NGADCGAIQPGKTCFAPNTLVAHA 429
>05_05_0172 +
22944351-22944388,22947342-22947446,22947532-22947585,
22948705-22949052,22949163-22949228,22950047-22950440
Length = 334
Score = 27.5 bits (58), Expect = 3.7
Identities = 15/36 (41%), Positives = 19/36 (52%)
Frame = +3
Query: 237 DTPKGGGDHPSPEADHQADGDQDPRADPRGLGAGPA 344
DT G +HPSP DG++D R D AGP+
Sbjct: 299 DTQSTGDEHPSP------DGEEDGRGDGCTDSAGPS 328
>07_01_0115 +
851505-852368,852611-852730,853000-853020,853253-853369,
853466-853555,853730-853837,853897-853932,853933-854022
Length = 481
Score = 26.6 bits (56), Expect = 6.5
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = +3
Query: 210 PAKLQIQHFDTPKGGGDHPSPEADHQADGDQDPRA--DPRGLGAGPAR 347
P + + DT SP+ D AD RA PR + A PAR
Sbjct: 98 PLRAALSSDDTESATSSAGSPDGDADADAKLAARARPSPRSIMASPAR 145
>03_02_0724 -
10718756-10718931,10719008-10719233,10719330-10719400,
10719496-10719583
Length = 186
Score = 26.6 bits (56), Expect = 6.5
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 255 GDHPSPEADHQADGDQDPRADPR 323
GD+P D+ +DG +D A PR
Sbjct: 145 GDYPDIYGDNSSDGGEDNAASPR 167
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = +3
Query: 243 PKGGGDHPSPEADHQADGDQDPRADPRGLGAGPARIHTGSADVRW 377
P GG PS A H G A+ + PA++H G D +
Sbjct: 417 PGAGG--PSYPAKHHLGGSSPGEANNMNFLSSPAQMHQGGMDTNY 459
>11_06_0289 - 21969248-21973516
Length = 1422
Score = 26.2 bits (55), Expect = 8.6
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +3
Query: 249 GGGDHPSPEADHQADGDQDPRADPRGLGAG 338
GGG+ E D + DG+++ + + R + G
Sbjct: 440 GGGEREEDEKDERGDGEEEGKEERRDMEKG 469
>10_06_0057 + 10143578-10143804,10144072-10144147,10144360-10144899
Length = 280
Score = 26.2 bits (55), Expect = 8.6
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = +3
Query: 204 EIPAKLQIQHFDTPKGGGDHPSPEADHQADGDQDPRADPRG 326
E+P + Q+ D P+ E +H G DP A PRG
Sbjct: 35 ELPRREQVLGADPPQRAPLAARREDEHGVGGVPDPDAVPRG 75
>08_02_1605 - 28166338-28166418,28166496-28166567,28166655-28166771,
28166846-28166956,28167077-28167252,28167340-28167421,
28167662-28167808,28167887-28168252,28168558-28168741,
28169104-28169213,28169452-28169508,28169589-28169600,
28169899-28169961,28170010-28170057,28170166-28170246,
28170326-28170389,28170661-28170686,28170782-28170868,
28170942-28170969,28171194-28171255,28171364-28171576,
28171667-28171774,28171948-28172022,28172136-28172249,
28172597-28172644,28172688-28172767,28172974-28173049,
28173287-28173427,28173685-28173762,28175100-28175204,
28177061-28177147,28177287-28178579
Length = 1463
Score = 26.2 bits (55), Expect = 8.6
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = +2
Query: 155 YKGQAVNCEDSETIQC-GNTCQAPN 226
+ GQAV CED C N Q PN
Sbjct: 991 HDGQAVTCEDFYAAMCDANNTQLPN 1015
>07_03_0739 -
21096684-21096742,21096822-21097076,21097206-21098498,
21098616-21098688
Length = 559
Score = 26.2 bits (55), Expect = 8.6
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 173 NCEDSETIQCGNTCQAPNTTL*HA 244
+C D IQ G C PNT + HA
Sbjct: 486 SCADCSAIQPGGRCFDPNTKVAHA 509
>06_03_0850 -
25354002-25354391,25354480-25354575,25355352-25355634,
25357213-25357799
Length = 451
Score = 26.2 bits (55), Expect = 8.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = +3
Query: 249 GGGDHPSPEADHQADGDQDPRAD 317
GGGD + D+ DGD D D
Sbjct: 94 GGGDEDQDDEDYVGDGDGDGEGD 116
>04_04_1012 - 30104401-30104955,30105066-30106841
Length = 776
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 252 GGDHPSPEADHQADGDQDPRADPRGLGAG 338
G DHP P + D D+D R R LG G
Sbjct: 372 GNDHPRPWRRNDRDDDRDDRG--RDLGRG 398
>04_04_1005 - 30043698-30044252,30044363-30046138
Length = 776
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 252 GGDHPSPEADHQADGDQDPRADPRGLGAG 338
G DHP P + D D+D R R LG G
Sbjct: 372 GNDHPRPWRRNDRDDDRDDRG--RDLGRG 398
>03_05_0990 -
29503950-29504462,29504567-29504686,29514956-29515012,
29515635-29515689,29515765-29515845,29515928-29515983,
29516112-29516256,29516347-29516415,29517355-29517467,
29517619-29517708,29518112-29518176,29519256-29519667
Length = 591
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +3
Query: 51 KTQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDK 167
K + + K I + +DNDV D +DE+++ E DK
Sbjct: 411 KINSMIEVWNKIDIVDNNDNDVTDDIEDEIFLTEGEEDK 449
>03_02_0504 - 8976973-8979414
Length = 813
Score = 26.2 bits (55), Expect = 8.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +3
Query: 252 GGDHPSPEADHQADGDQDPRADPRGLGAG 338
G DHP P + D D+D R R LG G
Sbjct: 372 GNDHPRPWRRNDRDDDRDDRG--RDLGRG 398
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,041,825
Number of Sequences: 37544
Number of extensions: 202366
Number of successful extensions: 729
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 728
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 612769692
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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