Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E05
(379 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical pr... 74 3e-14
Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical pr... 48 3e-06
U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical pr... 30 0.48
DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determini... 30 0.48
Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical pr... 29 1.1
Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical p... 29 1.1
AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like... 29 1.1
AF077540-7|AAC26307.2| 314|Caenorhabditis elegans Hypothetical ... 28 1.9
Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical pr... 27 3.4
Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical p... 27 3.4
AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical ... 27 3.4
AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical ... 27 3.4
Z82056-3|CAI79217.1| 74|Caenorhabditis elegans Hypothetical pr... 27 5.9
AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical... 26 7.8
AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical ... 26 7.8
>Z99942-4|CAB17069.1| 541|Caenorhabditis elegans Hypothetical
protein H13N06.4a protein.
Length = 541
Score = 74.1 bits (174), Expect = 3e-14
Identities = 36/79 (45%), Positives = 47/79 (59%)
Frame = +3
Query: 9 GLSIEPFWNVYGMHKTQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDKRLIVKTA 188
G +++PFW +Y HKT+EV +LE YRIG L DV D + +P R L+V+ +
Sbjct: 126 GAAVDPFWALYSQHKTKEVLEILEGYRIGKLDVKDVPKPVAD-AFSNDPERHPALLVRNS 184
Query: 189 KPFNAEIPAKLQIQHFDTP 245
KPFNAE P L HF TP
Sbjct: 185 KPFNAETPPSLLTDHFYTP 203
>Z99942-5|CAI79198.1| 178|Caenorhabditis elegans Hypothetical
protein H13N06.4b protein.
Length = 178
Score = 47.6 bits (108), Expect = 3e-06
Identities = 21/43 (48%), Positives = 28/43 (65%), Gaps = 2/43 (4%)
Frame = +3
Query: 9 GLSIEPFWNVYGMHKTQEVYMLLEKYRIGNLHDNDV--VDHSD 131
G +++PFW +Y HKT+EV +LE YRIG L DV +D D
Sbjct: 126 GAAVDPFWALYSQHKTKEVLEILEGYRIGKLDVKDVPKIDFED 168
>U39850-2|AAA81056.1| 451|Caenorhabditis elegans Hypothetical
protein F52C9.7 protein.
Length = 451
Score = 30.3 bits (65), Expect = 0.48
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 183 TAKPFNAEIPAKLQIQH--FDTPKGG-GDHPSPEADHQADGDQDPRADPRGLGAGPARIH 353
+++ F++ IP LQ Q D+ G +H + + + + D D R DPR G +
Sbjct: 262 SSRQFDSHIPRHLQQQRSRHDSSSGSESEHETRSSHRRRNSDDDERQDPRKKSYGLVEMR 321
Query: 354 TGSADVR 374
+A+ R
Sbjct: 322 KRTAEER 328
>DQ641631-1|ABG29106.1| 451|Caenorhabditis elegans sex determining
protein MOG-3 protein.
Length = 451
Score = 30.3 bits (65), Expect = 0.48
Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
Frame = +3
Query: 183 TAKPFNAEIPAKLQIQH--FDTPKGG-GDHPSPEADHQADGDQDPRADPRGLGAGPARIH 353
+++ F++ IP LQ Q D+ G +H + + + + D D R DPR G +
Sbjct: 262 SSRQFDSHIPRHLQQQRSRHDSSSGSESEHETRSSHRRRNSDDDERQDPRKKSYGLVEMR 321
Query: 354 TGSADVR 374
+A+ R
Sbjct: 322 KRTAEER 328
>Z78018-7|CAB01449.2| 2577|Caenorhabditis elegans Hypothetical protein
F15B9.7 protein.
Length = 2577
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/57 (19%), Positives = 28/57 (49%)
Frame = +3
Query: 12 LSIEPFWNVYGMHKTQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDKRLIVK 182
++++ FW+ + ++ L ++ ++H V H DD +++ I D +V+
Sbjct: 1104 MTVDDFWDPLVFQRFRDAMSTLSNWKPSDIHVIGVKQHLDDVIYINIAITDHGRVVR 1160
>Z78013-10|CAB01427.2| 2577|Caenorhabditis elegans Hypothetical
protein F15B9.7 protein.
Length = 2577
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/57 (19%), Positives = 28/57 (49%)
Frame = +3
Query: 12 LSIEPFWNVYGMHKTQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDKRLIVK 182
++++ FW+ + ++ L ++ ++H V H DD +++ I D +V+
Sbjct: 1104 MTVDDFWDPLVFQRFRDAMSTLSNWKPSDIHVIGVKQHLDDVIYINIAITDHGRVVR 1160
>AY314773-1|AAQ84880.1| 2596|Caenorhabditis elegans flamingo-like
protein FMI-1 protein.
Length = 2596
Score = 29.1 bits (62), Expect = 1.1
Identities = 11/57 (19%), Positives = 28/57 (49%)
Frame = +3
Query: 12 LSIEPFWNVYGMHKTQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDKRLIVK 182
++++ FW+ + ++ L ++ ++H V H DD +++ I D +V+
Sbjct: 1104 MTVDDFWDPLVFQRFRDAMSTLSNWKPSDIHVIGVKQHLDDVIYINIAITDHGRVVR 1160
>AF077540-7|AAC26307.2| 314|Caenorhabditis elegans Hypothetical
protein T07H3.6 protein.
Length = 314
Score = 28.3 bits (60), Expect = 1.9
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 4/69 (5%)
Frame = +3
Query: 90 IGNLHDNDVVDHSDDELWVKEPIRDKRLIVKT----AKPFNAEIPAKLQIQHFDTPKGGG 257
IGN + +DV DH LW I D R + T +A ++++H K G
Sbjct: 38 IGNTYTSDVEDHFGF-LWHLSYIYDGRFLRTTLNIDVNGRSALWSVGMKVRHMFVTKNGA 96
Query: 258 DHPSPEADH 284
DH DH
Sbjct: 97 DHFHNSTDH 105
>Z92967-2|CAB07478.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 VVDHSDDELWVKEPIRDKRLIVKTAKPFNAEIPAKLQ 224
V DHSDDE+W R +++P ++ +LQ
Sbjct: 196 VFDHSDDEVWTPYRPPPNREYSSSSEPMMGDLTFRLQ 232
>Z82052-10|CAB04830.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 VVDHSDDELWVKEPIRDKRLIVKTAKPFNAEIPAKLQ 224
V DHSDDE+W R +++P ++ +LQ
Sbjct: 196 VFDHSDDEVWTPYRPPPNREYSSSSEPMMGDLTFRLQ 232
>AL021572-4|CAA16519.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 VVDHSDDELWVKEPIRDKRLIVKTAKPFNAEIPAKLQ 224
V DHSDDE+W R +++P ++ +LQ
Sbjct: 196 VFDHSDDEVWTPYRPPPNREYSSSSEPMMGDLTFRLQ 232
>AL021507-1|CAA16430.1| 1101|Caenorhabditis elegans Hypothetical
protein T25E12.4a protein.
Length = 1101
Score = 27.5 bits (58), Expect = 3.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +3
Query: 114 VVDHSDDELWVKEPIRDKRLIVKTAKPFNAEIPAKLQ 224
V DHSDDE+W R +++P ++ +LQ
Sbjct: 196 VFDHSDDEVWTPYRPPPNREYSSSSEPMMGDLTFRLQ 232
>Z82056-3|CAI79217.1| 74|Caenorhabditis elegans Hypothetical
protein T26H5.9 protein.
Length = 74
Score = 26.6 bits (56), Expect = 5.9
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = -2
Query: 132 RQNDPPHRCHEGYLFYISQATYKLLESYASR 40
R+ +PP+R H+ L Y+ A + +YA+R
Sbjct: 35 REQEPPYRFHDPELQYVVHACDPRVIAYAAR 65
>AL021497-12|CAA16402.2| 1222|Caenorhabditis elegans Hypothetical
protein Y51A2D.15 protein.
Length = 1222
Score = 26.2 bits (55), Expect = 7.8
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +3
Query: 45 MHKTQEVYMLLEKYRIGNLHDNDVVDHSDDELWVKEPIRDKRLIVKTAKPFNAEIPAKLQ 224
MH ++V+ML EK R NL ++ +D+ VK I + + NAEI A+LQ
Sbjct: 782 MHTKEQVFMLQEKLRELNL---ELSTKNDEIDMVKASIEELNRNSTASCTSNAEI-ARLQ 837
Query: 225 I 227
+
Sbjct: 838 V 838
>AC006651-1|AAF39870.4| 1138|Caenorhabditis elegans Hypothetical
protein H06I04.5 protein.
Length = 1138
Score = 26.2 bits (55), Expect = 7.8
Identities = 14/47 (29%), Positives = 22/47 (46%)
Frame = +3
Query: 180 KTAKPFNAEIPAKLQIQHFDTPKGGGDHPSPEADHQADGDQDPRADP 320
K +KP ++E+P P P+P+ D + D DP+ DP
Sbjct: 664 KKSKPSSSEVPPA-------EPSAPEPKPAPKPDPKPDPKPDPKPDP 703
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,333,939
Number of Sequences: 27780
Number of extensions: 163339
Number of successful extensions: 550
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 529
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 557037416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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