Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E04
         (196 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.          22   0.58 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   1.8  
AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive...    21   1.8  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    20   3.1  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      19   7.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    18   9.4  

>AY375535-1|AAQ82648.1|  147|Apis mellifera doublesex protein.
          Length = 147

 Score = 22.2 bits (45), Expect = 0.58
 Identities = 8/13 (61%), Positives = 12/13 (92%)
 Frame = +2

Query: 149 IKLKRHKAQDELR 187
           +KLKRH AQD+++
Sbjct: 23  MKLKRHLAQDKVK 35


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 68  VALSWIHSSPHRW 30
           VA+S+IH   HR+
Sbjct: 370 VAISYIHDPDHRY 382


>AF004169-1|AAC13418.1|  371|Apis mellifera ultraviolet-sensitive
           opsin protein.
          Length = 371

 Score = 20.6 bits (41), Expect = 1.8
 Identities = 8/23 (34%), Positives = 14/23 (60%)
 Frame = -1

Query: 112 HFIL*MLYTPFLIRQLLCHGFIL 44
           H++L +LY  F    LL +G ++
Sbjct: 48  HYLLALLYILFTFLALLGNGLVI 70


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 19.8 bits (39), Expect = 3.1
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -3

Query: 152 LSKLVKTVYNAYNSLHPINAIY 87
           +  + K VY++ NSL    +IY
Sbjct: 34  ICNICKRVYSSLNSLRNHKSIY 55


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 18.6 bits (36), Expect = 7.1
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 125 CKQFLLI*IKLKRHKAQDELR 187
           C + L   + LKRHK Q   +
Sbjct: 377 CGKTLSTKLTLKRHKEQQHFQ 397


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 18.2 bits (35), Expect = 9.4
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -3

Query: 164 AALVLSKLVKTV 129
           AA ++SKL KTV
Sbjct: 527 AANIMSKLPKTV 538


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,021
Number of Sequences: 438
Number of extensions: 673
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 44
effective length of database: 127,071
effective search space used:  2541420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)