Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E03
         (214 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    21   2.2  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   2.9  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    19   6.7  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    19   8.9  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 20.6 bits (41), Expect = 2.2
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = +1

Query: 148 DPERFDSMLLAMAQQH 195
           DPERFD    AMA +H
Sbjct: 417 DPERFDQD--AMASRH 430



 Score = 18.6 bits (36), Expect = 8.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +1

Query: 91  LSLFCPKNS 117
           ++ FCPKN+
Sbjct: 334 INTFCPKNN 342


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 2.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 76  LCASYLSLFCPKNSVLLLLEKMAND 150
           +C S + +F  KNS LL   K+ +D
Sbjct: 149 VCPSQIVVFDLKNSKLLKQVKIPHD 173


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 19.0 bits (37), Expect = 6.7
 Identities = 10/40 (25%), Positives = 20/40 (50%)
 Frame = -1

Query: 193 VAVP*QVTLNQIFPDHLPFFLVIIIHCFWDKIMINKRHTI 74
           +A+P  VT + +F       LV+   C++   + + RH +
Sbjct: 138 MAIPYAVTKSAMFFFAATSLLVVAEVCYFTAHVTHPRHRL 177


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 18.6 bits (36), Expect = 8.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 84  GTQSYRSTGALIT 46
           G  S+ +TG LIT
Sbjct: 659 GAMSFSATGILIT 671


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,932
Number of Sequences: 438
Number of extensions: 1203
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 45
effective length of database: 126,633
effective search space used:  3165825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)