Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_E02
         (103 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    20   2.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    19   3.4  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 19.8 bits (39), Expect = 2.6
 Identities = 7/12 (58%), Positives = 7/12 (58%)
 Frame = -3

Query: 41  HYPCTS*FSFNP 6
           H PC S   FNP
Sbjct: 944 HMPCPSNLVFNP 955


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 19.4 bits (38), Expect = 3.4
 Identities = 5/11 (45%), Positives = 10/11 (90%)
 Frame = +3

Query: 54  NIHLSYLVCIE 86
           N+HL +L+C++
Sbjct: 190 NMHLLFLLCLD 200



 Score = 18.6 bits (36), Expect = 5.9
 Identities = 5/9 (55%), Positives = 8/9 (88%)
 Frame = +3

Query: 54 NIHLSYLVC 80
          N+HL +L+C
Sbjct: 67 NVHLLFLLC 75


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,734
Number of Sequences: 336
Number of extensions: 220
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 15
effective length of database: 117,545
effective search space used:  2115810
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)