Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E01
(315 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 158 4e-39
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 158 4e-39
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 158 4e-39
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 158 4e-39
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 158 4e-39
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 157 8e-39
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 155 3e-38
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 149 1e-36
U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein. 30 1.2
U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein. 30 1.2
U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3 pro... 30 1.2
BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3 p... 30 1.2
AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3 p... 30 1.2
AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3 p... 30 1.2
AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3 p... 30 1.2
AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C ... 30 1.2
L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein. 30 1.6
L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein. 30 1.6
BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein. 30 1.6
BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein. 30 1.6
AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein. 30 1.6
BC127114-1|AAI27115.1| 1224|Homo sapiens ZMYM4 protein protein. 27 8.8
BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein. 27 8.8
BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein. 27 8.8
AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4... 27 8.8
AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4... 27 8.8
AL356362-3|CAI22687.1| 1206|Homo sapiens zinc finger, MYM-type 4... 27 8.8
AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4... 27 8.8
AB007885-1|BAA24855.2| 1270|Homo sapiens KIAA0425 protein. 27 8.8
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 158 bits (383), Expect = 4e-39
Identities = 71/85 (83%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 157 bits (380), Expect = 8e-39
Identities = 70/85 (82%), Positives = 81/85 (95%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMG++TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGRNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI+GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIRGN 85
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 155 bits (375), Expect = 3e-38
Identities = 71/85 (83%), Positives = 79/85 (92%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG +VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKVVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLPHI GN
Sbjct: 61 MRKAIRGHLENNPALEKLLPHIWGN 85
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 149 bits (362), Expect = 1e-36
Identities = 69/85 (81%), Positives = 80/85 (94%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED+ATWKSNYF+KIIQLLD+YPKCFIVGADNVGS+QMQQIR+SLRG ++VLMGK+TM
Sbjct: 1 MPREDRATWKSNYFLKIIQLLDDYPKCFIVGADNVGSKQMQQIRMSLRGKAVVLMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
MRKAI+ HLE NPALEKLLP ++GN
Sbjct: 61 MRKAIRGHLENNPALEKLLP-LRGN 84
>U75697-1|AAB88241.1| 428|Homo sapiens RPD3-2B protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>U75696-1|AAB88240.1| 429|Homo sapiens RPD3-2A protein.
Length = 429
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 229 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 277
>U66914-1|AAC52038.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>BC000614-1|AAH00614.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF059650-1|AAC26509.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF053138-1|AAC08351.1| 259|Homo sapiens histone deacetylase 3
protein.
Length = 259
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 134 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 182
>AF039703-1|AAC98927.1| 428|Homo sapiens histone deacetylase 3
protein.
Length = 428
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 228 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 276
>AF005482-1|AAB87752.1| 371|Homo sapiens histone deacetylase-3C
protein.
Length = 371
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/49 (32%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +3
Query: 72 DKATWKSNYFVKIIQLLDEY-PKCFIV--GADNVGSQQMQQIRISLRGH 209
D ++K + I Q++D Y P C ++ GAD++G ++ +S+RGH
Sbjct: 171 DDQSYKHLFQPVINQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGH 219
>L29222-1|AAB59459.1| 136|Homo sapiens clk1 protein.
Length = 136
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 185 DPYFIAWSQHCAHGQRHHDEESHQGPS*NKSSSRKTASSHQGK 313
D Y ++Q C G R D ES +KSS R SS++ K
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSK 116
>L29219-1|AAA61480.1| 484|Homo sapiens clk1 protein.
Length = 484
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 185 DPYFIAWSQHCAHGQRHHDEESHQGPS*NKSSSRKTASSHQGK 313
D Y ++Q C G R D ES +KSS R SS++ K
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSK 116
>BC031549-1|AAH31549.1| 484|Homo sapiens CDC-like kinase 1 protein.
Length = 484
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 185 DPYFIAWSQHCAHGQRHHDEESHQGPS*NKSSSRKTASSHQGK 313
D Y ++Q C G R D ES +KSS R SS++ K
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSK 116
>BC028149-1|AAH28149.1| 136|Homo sapiens CDC-like kinase 1 protein.
Length = 136
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 185 DPYFIAWSQHCAHGQRHHDEESHQGPS*NKSSSRKTASSHQGK 313
D Y ++Q C G R D ES +KSS R SS++ K
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSK 116
>AC005037-5|AAY14722.1| 484|Homo sapiens unknown protein.
Length = 484
Score = 29.9 bits (64), Expect = 1.6
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = +2
Query: 185 DPYFIAWSQHCAHGQRHHDEESHQGPS*NKSSSRKTASSHQGK 313
D Y ++Q C G R D ES +KSS R SS++ K
Sbjct: 74 DEYRNDYTQGCEPGHRQRDHESRYQNHSSKSSGRSGRSSYKSK 116
>BC127114-1|AAI27115.1| 1224|Homo sapiens ZMYM4 protein protein.
Length = 1224
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 607 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 641
>BC127113-1|AAI27114.1| 1516|Homo sapiens ZMYM4 protein protein.
Length = 1516
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 899 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 933
>BC012093-1|AAH12093.2| 1434|Homo sapiens ZMYM4 protein protein.
Length = 1434
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 817 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 851
>AL590434-3|CAI12468.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 931 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 965
>AL356362-7|CAI22691.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 931 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 965
>AL356362-3|CAI22687.1| 1206|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1206
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 590 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 624
>AL160000-1|CAH71313.1| 1548|Homo sapiens zinc finger, MYM-type 4
protein.
Length = 1548
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 931 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 965
>AB007885-1|BAA24855.2| 1270|Homo sapiens KIAA0425 protein.
Length = 1270
Score = 27.5 bits (58), Expect = 8.8
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +1
Query: 34 EVPTSLNPRWVGRTRLPGSPITSLKSSNCWTNTQN 138
++P S PR + L PIT K+++C +TQN
Sbjct: 653 KLPPSQPPRLLKNKALLCKPITQTKATSCKPHTQN 687
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,217,914
Number of Sequences: 237096
Number of extensions: 1126618
Number of successful extensions: 2331
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 2267
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2331
length of database: 76,859,062
effective HSP length: 79
effective length of database: 58,128,478
effective search space used: 1453211950
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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