Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_E01
(315 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical pr... 130 3e-31
Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical p... 28 1.6
Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical p... 28 1.6
Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical p... 28 1.6
Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical p... 28 1.6
Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical p... 28 1.6
Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical p... 28 1.6
Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical p... 28 1.6
Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical pr... 28 1.6
Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical pr... 28 1.6
AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical ... 27 2.8
Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical p... 27 3.8
AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical ... 27 3.8
Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical pr... 26 5.0
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 26 5.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 5.0
U40954-7|AAB52654.2| 145|Caenorhabditis elegans Hypothetical pr... 26 5.0
AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical ... 26 5.0
Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical pr... 26 6.6
Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical p... 26 6.6
Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical pr... 26 6.6
U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical pr... 26 6.6
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 26 6.6
Z77661-9|CAI46604.1| 345|Caenorhabditis elegans Hypothetical pr... 25 8.7
AF025464-3|AAB71016.3| 949|Caenorhabditis elegans Transporter o... 25 8.7
>Z79754-9|CAB02098.1| 312|Caenorhabditis elegans Hypothetical
protein F25H2.10 protein.
Length = 312
Score = 130 bits (313), Expect = 3e-31
Identities = 54/85 (63%), Positives = 73/85 (85%)
Frame = +3
Query: 60 MGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKDTM 239
M RED++TWK+NYF K+++L +EYPKC +VG DNVGS+QMQ+IR ++RGH+ +LMGK+TM
Sbjct: 1 MVREDRSTWKANYFTKLVELFEEYPKCLLVGVDNVGSKQMQEIRQAMRGHAEILMGKNTM 60
Query: 240 MRKAIKDHLETNPALEKLLPHIKGN 314
+RKA++ HL NP+LEKLLPHI N
Sbjct: 61 IRKALRGHLGKNPSLEKLLPHIVEN 85
>Z82266-17|CAJ80813.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z82266-16|CAJ80812.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z82266-15|CAD36491.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z82266-14|CAD36490.1| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>Z82266-10|CAJ80811.1| 331|Caenorhabditis elegans Hypothetical
protein C01F6.6e protein.
Length = 331
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 254 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 289
>Z68213-11|CAJ80817.1| 446|Caenorhabditis elegans Hypothetical
protein C01F6.6d protein.
Length = 446
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 369 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 404
>Z68213-10|CAJ80816.1| 423|Caenorhabditis elegans Hypothetical
protein C01F6.6c protein.
Length = 423
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 346 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 381
>Z68213-9|CAD37352.1| 608|Caenorhabditis elegans Hypothetical
protein C01F6.6b protein.
Length = 608
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 531 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 566
>Z68213-8|CAA92439.3| 467|Caenorhabditis elegans Hypothetical
protein C01F6.6a protein.
Length = 467
Score = 27.9 bits (59), Expect = 1.6
Identities = 16/36 (44%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS--*NKSSSRKTASSHQG 310
+H H Q HH HQ PS N SS ASS G
Sbjct: 390 KHEQHSQTHHHHHQHQQPSPLSNGSSHGYAASSTSG 425
>AF039051-5|AAB94265.2| 509|Caenorhabditis elegans Hypothetical
protein C14C6.7 protein.
Length = 509
Score = 27.1 bits (57), Expect = 2.8
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Frame = +3
Query: 6 RICLVLKFLRSP--YFTQSKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQM 179
R+ V+K +P Y T++++ RE N + I + + PKC I+ +NVG +
Sbjct: 351 RVKWVMKHKYTPERYKTEAQLKREMLFHKYQN--ISQIGAIWDQPKC-IIRPENVGIMSI 407
Query: 180 QQIRISLRGHSIVLMGKDT 236
R G I L+ +DT
Sbjct: 408 HGPREMYEGEQITLVEEDT 426
>Z81529-12|CAB04303.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 138 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKDTMMRKAIKDHLETNPALEKL 293
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKV 234
>AL023816-5|CAA19434.1| 492|Caenorhabditis elegans Hypothetical
protein T05G11.1 protein.
Length = 492
Score = 26.6 bits (56), Expect = 3.8
Identities = 12/54 (22%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +3
Query: 138 CFIVGAD--NVGSQQMQQIRISLRGHSIVLMGKDTMMRKAIKDHLETNPALEKL 293
C G D + GS + + R + GH+ +L + + ++DH+++ ++K+
Sbjct: 181 CGFCGKDFFHEGSLREHRRRFHMTGHTCLLCNRQIPENETVRDHMKSQHNIKKV 234
>Z19155-4|CAA79560.3| 844|Caenorhabditis elegans Hypothetical
protein F54G8.5 protein.
Length = 844
Score = 26.2 bits (55), Expect = 5.0
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Frame = -2
Query: 215 NAVTTQ*NTDLLHLLRAYIVRTHYETFWVFVQQLDDFNEVIGLPGSLVLPTHLGLSE--V 42
+A++T LL + +YIVRT T + FV L + +I LP ++L T + SE V
Sbjct: 767 SALSTAIGVSLLSFVHSYIVRTFVNTVF-FVVGLGILHGLIFLP--VLLDTIVPDSEYMV 823
Query: 41 GTSEKFKDKTNP 6
+ +D+ NP
Sbjct: 824 PYEPQHEDEENP 835
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 218 AHGQ-RHHDEESHQGPS*NKSSSRKTASSHQG 310
AH + +HH+ H GP N + R +H G
Sbjct: 63 AHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDG 94
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Frame = +2
Query: 218 AHGQ-RHHDEESHQGPS*NKSSSRKTASSHQG 310
AH + +HH+ H GP N + R +H G
Sbjct: 907 AHNRGQHHNRGHHHGPPRNHNQDRNRHRNHDG 938
>U40954-7|AAB52654.2| 145|Caenorhabditis elegans Hypothetical
protein ZK813.1 protein.
Length = 145
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQGPS*NKSSSRKTAS 298
+H HG+RH D S ++SSS ++S
Sbjct: 61 RHGRHGRRHSDSSDSSSESRSRSSSGSSSS 90
>AF036705-7|AAB95174.1| 324|Caenorhabditis elegans Hypothetical
protein F37C4.8 protein.
Length = 324
Score = 26.2 bits (55), Expect = 5.0
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 288 FRELDLFQDGP*WLSSSWCLCP*AQC 211
F+ L+LF + W S C CP A C
Sbjct: 44 FQNLELFVEWSNWSCCSACCCPKAVC 69
>Z72517-8|CAA96697.2| 1883|Caenorhabditis elegans Hypothetical protein
C26C6.1a protein.
Length = 1883
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQ 256
QH H Q+HHD HQ
Sbjct: 1688 QHPQHMQQHHDHHPHQ 1703
>Z72503-12|CAA96600.2| 1883|Caenorhabditis elegans Hypothetical
protein C26C6.1a protein.
Length = 1883
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQ 256
QH H Q+HHD HQ
Sbjct: 1688 QHPQHMQQHHDHHPHQ 1703
>Z72503-5|CAI79155.1| 513|Caenorhabditis elegans Hypothetical
protein C26C6.1b protein.
Length = 513
Score = 25.8 bits (54), Expect = 6.6
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +2
Query: 209 QHCAHGQRHHDEESHQ 256
QH H Q+HHD HQ
Sbjct: 318 QHPQHMQQHHDHHPHQ 333
>U41264-4|AAA82424.1| 220|Caenorhabditis elegans Hypothetical
protein F10E7.5 protein.
Length = 220
Score = 25.8 bits (54), Expect = 6.6
Identities = 17/67 (25%), Positives = 34/67 (50%)
Frame = +3
Query: 54 SKMGREDKATWKSNYFVKIIQLLDEYPKCFIVGADNVGSQQMQQIRISLRGHSIVLMGKD 233
+K+ ++ K T K+N ++ +D+Y FI N+ S + IR + +S GK+
Sbjct: 13 TKVKKKTKDT-KNNLVNEVRASVDQYKNLFIFTIANMRSTRFIAIRQKYKENSRFFFGKN 71
Query: 234 TMMRKAI 254
++ A+
Sbjct: 72 NVISIAL 78
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 25.8 bits (54), Expect = 6.6
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = +2
Query: 218 AHGQRHHDEESHQGPS*NKSSSRKTASS 301
+HG++HH + + S + SSS ++SS
Sbjct: 329 SHGKKHHKKAASSSSSSSSSSSSSSSSS 356
>Z77661-9|CAI46604.1| 345|Caenorhabditis elegans Hypothetical
protein F40G12.15 protein.
Length = 345
Score = 25.4 bits (53), Expect = 8.7
Identities = 10/21 (47%), Positives = 12/21 (57%)
Frame = -1
Query: 207 DHAMKYGSVASVASLHCPHPL 145
D KYGSV S+ +C H L
Sbjct: 2 DQIYKYGSVVSIPLYNCSHQL 22
>AF025464-3|AAB71016.3| 949|Caenorhabditis elegans Transporter of
sr proteins protein1 protein.
Length = 949
Score = 25.4 bits (53), Expect = 8.7
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 4/51 (7%)
Frame = +2
Query: 110 HPTVGRIPKMFHSGCG---QCRLATDATDPYFIAWSQHCA-HGQRHHDEES 250
+PT+ I + H GCG Q + T +F + C+ HG HD +S
Sbjct: 15 NPTICAIEHICHRGCGSYAQIFIFHSKTCNFFHFFKFFCSRHGASAHDAQS 65
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,215,514
Number of Sequences: 27780
Number of extensions: 163898
Number of successful extensions: 464
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 464
length of database: 12,740,198
effective HSP length: 71
effective length of database: 10,767,818
effective search space used: 355337994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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