Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D19
         (467 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    25   0.40 
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        23   1.6  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.2  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.2  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.8  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    21   6.6  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   6.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    21   6.6  
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    21   8.7  
AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alph...    21   8.7  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   8.7  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 8/12 (66%), Positives = 9/12 (75%)
 Frame = +3

Query: 162 DIYNYNISWDHC 197
           +I NYNI WD C
Sbjct: 103 EIKNYNIDWDKC 114


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +2

Query: 257 HQHRQEHSVAADLEYALHNCAPGRGLICA 343
           H H+Q+ +VAA    A  +  PG G   A
Sbjct: 99  HHHQQQQAVAAAAFGATSSMVPGFGSTAA 127


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = -3

Query: 90  RCSG-CGTRASTSSEQST--TPECLCCR 16
           +C G C ++   S   +T  + EC CCR
Sbjct: 68  KCEGFCNSQVQPSVASTTGFSKECYCCR 95


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 22.6 bits (46), Expect = 2.2
 Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 3/28 (10%)
 Frame = -3

Query: 90  RCSG-CGTRASTSSEQST--TPECLCCR 16
           +C G C ++   S   +T  + EC CCR
Sbjct: 68  KCEGFCNSQVQPSVASTTGFSKECYCCR 95


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 150 RYEKDIYNYNISWDHCST 203
           RY+++  N N +W+H  T
Sbjct: 178 RYKEEESNENYNWEHKET 195


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 93  HRCSGCGTRAS 61
           H CS CG RAS
Sbjct: 108 HLCSICGDRAS 118


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = -3

Query: 279 ECSCRCWCGLDHFCGCCTRGSRI 211
           EC+ RC C +D       RG+++
Sbjct: 473 ECNKRCNCDIDCINRVVQRGTKM 495


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -3

Query: 93  HRCSGCGTRAS 61
           H CS CG RAS
Sbjct: 108 HLCSICGDRAS 118


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 192 HCSTVRRFYFLWYNIRRSDRDHT 260
           HCS   R +    N+RR  R HT
Sbjct: 39  HCSHCDRQFVQVANLRRHLRVHT 61


>AM420631-1|CAM06631.1|  153|Apis mellifera bursicon subunit alpha
           protein precursor protein.
          Length = 153

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 8/23 (34%), Positives = 11/23 (47%)
 Frame = -3

Query: 333 KPRPGAQLCRAYSRSAATECSCR 265
           + +PG +  R     A  EC CR
Sbjct: 94  RAKPGEKKFRKVITKAPLECMCR 116


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 254 PHQHRQEHSVAADL 295
           PHQH+Q +  A  +
Sbjct: 21  PHQHQQHYGAAVQV 34


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/21 (33%), Positives = 10/21 (47%)
 Frame = +2

Query: 221 PLVQHPQK*SRPHQHRQEHSV 283
           P   HP + S PH     H++
Sbjct: 323 PSQYHPHRGSSPHHQHGNHTM 343


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.312    0.130    0.376 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,971
Number of Sequences: 438
Number of extensions: 2968
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12559158
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.4 bits)