Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D18
(271 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 34 0.012
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 34 0.012
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 34 0.012
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 34 0.016
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 34 0.016
Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical pr... 29 0.34
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 29 0.45
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 29 0.45
AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily a... 28 1.0
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 27 1.4
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 27 1.4
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 27 1.4
AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical... 27 1.8
AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical ... 27 2.4
Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical pr... 26 3.2
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 26 4.2
U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical p... 26 4.2
Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical p... 25 5.6
Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical p... 25 5.6
Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical pr... 25 7.3
Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical pr... 25 7.3
U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical pr... 25 7.3
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 25 7.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 25 9.7
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 25 9.7
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 25 9.7
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 34.3 bits (75), Expect = 0.012
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 161 WAEYYRSMGKIKEAEAIEAQMR 226
W EYY+S+G +AEA+EAQM+
Sbjct: 467 WMEYYKSIGAHDKAEAVEAQMK 488
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 34.3 bits (75), Expect = 0.012
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 161 WAEYYRSMGKIKEAEAIEAQMR 226
W EYY+S+G +AEA+EAQM+
Sbjct: 530 WMEYYKSIGAHDKAEAVEAQMK 551
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 34.3 bits (75), Expect = 0.012
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 161 WAEYYRSMGKIKEAEAIEAQMR 226
W EYY+S+G +AEA+EAQM+
Sbjct: 508 WMEYYKSIGAHDKAEAVEAQMK 529
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 33.9 bits (74), Expect = 0.016
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 161 WAEYYRSMGKIKEAEAIEAQMR 226
WA YYRS+G +++A +E+QMR
Sbjct: 464 WAAYYRSIGLVEQAAMVESQMR 485
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 33.9 bits (74), Expect = 0.016
Identities = 12/22 (54%), Positives = 18/22 (81%)
Frame = +2
Query: 161 WAEYYRSMGKIKEAEAIEAQMR 226
WA YYRS+G +++A +E+QMR
Sbjct: 511 WAAYYRSIGLVEQAAMVESQMR 532
>Z72514-1|CAA96674.1| 428|Caenorhabditis elegans Hypothetical
protein T10B10.1 protein.
Length = 428
Score = 29.5 bits (63), Expect = 0.34
Identities = 21/68 (30%), Positives = 26/68 (38%), Gaps = 6/68 (8%)
Frame = -3
Query: 191 FCPC----SGSTPPTARCSPPVRWP--ARRERRVLRPTAGPRDPGSRARPATRTLPPVVV 30
+CPC TPP++ S P P + P A P +RA PAT PP
Sbjct: 273 YCPCPQRQDDRTPPSSGTSAPQPPPRGSTAAPGTRAPPATRAPPATRAPPATTRAPPATT 332
Query: 29 SYYPMIVP 6
P P
Sbjct: 333 RPAPASQP 340
Score = 26.2 bits (55), Expect = 3.2
Identities = 19/51 (37%), Positives = 21/51 (41%), Gaps = 1/51 (1%)
Frame = -3
Query: 185 PCSGSTP-PTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPV 36
P GST P R P R P P A R P + RPA + PPV
Sbjct: 296 PPRGSTAAPGTRAPPATRAPPATRA----PPATTRAPPATTRPAPASQPPV 342
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.1 bits (62), Expect = 0.45
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -3
Query: 167 PPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVVVSYYPMIVP 6
PP SPP R PA + P + + RP T PP S+ P + P
Sbjct: 102 PPPIPASPPPRPPASEPVGI--PLYSEKQHQQQLRPTTAVSPPKPPSFAPPVPP 153
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.1 bits (62), Expect = 0.45
Identities = 17/54 (31%), Positives = 22/54 (40%)
Frame = -3
Query: 167 PPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVVVSYYPMIVP 6
PP SPP R PA + P + + RP T PP S+ P + P
Sbjct: 324 PPPIPASPPPRPPASEPVGI--PLYSEKQHQQQLRPTTAVSPPKPPSFAPPVPP 375
>AF077534-1|AAK71375.1| 1136|Caenorhabditis elegans Temporarily
assigned gene nameprotein 218, isoform a protein.
Length = 1136
Score = 27.9 bits (59), Expect = 1.0
Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 3/54 (5%)
Frame = -3
Query: 173 STPPTARCSPPVRWPARRERRVLRPTAGPRDPGS---RARPATRTLPPVVVSYY 21
S PP PP + +R L+PT PR + RAR T PP V + +
Sbjct: 160 SPPPPLPSVPPSKERIKRIPSYLKPTPAPRSMSATLPRARLKTPPPPPPVTNQF 213
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 27.5 bits (58), Expect = 1.4
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 212 LSPRPL*FCPCSGSTPPTARCSPPVRWPA 126
L P P PC G +P A C PP PA
Sbjct: 89 LPPPPPPASPCCGPSPVPAPCCPPPPAPA 117
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 176 GSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVV 33
G PP PP P RR R RP + G AR TR+ PP +
Sbjct: 442 GRVPPP----PPPPPPRRRSRSRDRPRLVFSNIGGSARRRTRSAPPAI 485
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 27.5 bits (58), Expect = 1.4
Identities = 18/48 (37%), Positives = 21/48 (43%)
Frame = -3
Query: 176 GSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVV 33
G PP PP P RR R RP + G AR TR+ PP +
Sbjct: 390 GRVPPP----PPPPPPRRRSRSRDRPRLVFSNIGGSARRRTRSAPPAI 433
>AL023835-10|CAA19494.2| 691|Caenorhabditis elegans Hypothetical
protein Y37A1B.11 protein.
Length = 691
Score = 27.1 bits (57), Expect = 1.8
Identities = 19/55 (34%), Positives = 22/55 (40%)
Frame = -3
Query: 218 VLLSPRPL*FCPCSGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPAT 54
+L SP P P TPP P R P V PT P P ++ RP T
Sbjct: 534 ILPSPEP---SPVREPTPPPPPREPTPREPTPEPEPVREPTP-PPPPPAKPRPLT 584
>AL032651-1|CAB60580.1| 681|Caenorhabditis elegans Hypothetical
protein Y6D1A.1 protein.
Length = 681
Score = 26.6 bits (56), Expect = 2.4
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = -3
Query: 170 TPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRAR 63
+PP R PP+R P R E G R SR++
Sbjct: 69 SPPRVRREPPMRSPGRNEVMSPERRYGTRSASSRSQ 104
>Z83222-1|CAB05712.1| 410|Caenorhabditis elegans Hypothetical
protein E01B7.1 protein.
Length = 410
Score = 26.2 bits (55), Expect = 3.2
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 125 RRERRVLRPTAGPRDPGSRARPATRTLPPVVVSYYPMIVP 6
R E P A P + A T+PPV ++ PMI P
Sbjct: 330 RPEPTAQTPPAPAAPPAAPALNRQSTIPPVAMTQRPMIPP 369
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 26.2 bits (55), Expect = 3.2
Identities = 17/55 (30%), Positives = 21/55 (38%)
Frame = -3
Query: 167 PPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPATRTLPPVVVSYYPMIVPR 3
PP +PP R P R + P+ R P + P R P S P PR
Sbjct: 143 PPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPPSPEPRNPPRTPPSPIPPPPPR 197
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 25.8 bits (54), Expect = 4.2
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -3
Query: 170 TPPTARCSPPVRWPARRERR 111
+PP R SPP R RR+RR
Sbjct: 234 SPPRRRGSPPARGGDRRDRR 253
>U21308-15|AAB93316.2| 412|Caenorhabditis elegans Hypothetical
protein ZK1290.10 protein.
Length = 412
Score = 25.8 bits (54), Expect = 4.2
Identities = 17/64 (26%), Positives = 25/64 (39%)
Frame = -3
Query: 236 LVLISFVLLSPRPL*FCPCSGSTPPTARCSPPVRWPARRERRVLRPTAGPRDPGSRARPA 57
L +I P+P + PP+A+ +PP P +R L P P P +
Sbjct: 74 LPIIQITTKEPQPPASLTSLPAAPPSAQVAPPAIRPPEAKRTSLEPPQ-PSTPQASISST 132
Query: 56 TRTL 45
T L
Sbjct: 133 TTVL 136
>Z74031-17|CAN86923.1| 380|Caenorhabditis elegans Hypothetical
protein F32D8.7b protein.
Length = 380
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 104 RPTAGPRDPGSRARPATRTLPP 39
+PT P R RP TR LPP
Sbjct: 222 KPTPAPTLAPFRPRPTTRRLPP 243
>Z74031-16|CAA98452.1| 378|Caenorhabditis elegans Hypothetical
protein F32D8.7a protein.
Length = 378
Score = 25.4 bits (53), Expect = 5.6
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 104 RPTAGPRDPGSRARPATRTLPP 39
+PT P R RP TR LPP
Sbjct: 220 KPTPAPTLAPFRPRPTTRRLPP 241
>Z69384-8|CAM06585.1| 495|Caenorhabditis elegans Hypothetical
protein T11G6.2b protein.
Length = 495
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 161 TARCSPPVRWPARRERRVLR 102
TA C PV W +ERR+ R
Sbjct: 444 TALCLVPVLWKEHKERRIHR 463
>Z69384-7|CAA93417.2| 502|Caenorhabditis elegans Hypothetical
protein T11G6.2a protein.
Length = 502
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 161 TARCSPPVRWPARRERRVLR 102
TA C PV W +ERR+ R
Sbjct: 451 TALCLVPVLWKEHKERRIHR 470
>U41015-4|AAA82313.1| 317|Caenorhabditis elegans Hypothetical
protein F20B6.5 protein.
Length = 317
Score = 25.0 bits (52), Expect = 7.3
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 149 SPPVRWPARRERRVLRPTAGPRDPGSRARPATR 51
+PPV P R+R V RP+ P RA+P R
Sbjct: 118 APPVT-PRNRQRSV-RPSGSNAQPSGRAQPDYR 148
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 25.0 bits (52), Expect = 7.3
Identities = 10/21 (47%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -3
Query: 188 CPCSGSTPPTARCSP-PVRWP 129
C CSGST + C+P P +P
Sbjct: 845 CACSGSTTKQSECAPAPCPFP 865
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 24.6 bits (51), Expect = 9.7
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = -3
Query: 185 PCSGSTPPTARCSP-------PVRWPARRERRVLRPTAGPRDPGSRARPATRTLPP 39
P +GS PP SP P PA R + P P R P T +LPP
Sbjct: 259 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 314
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 24.6 bits (51), Expect = 9.7
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = -3
Query: 185 PCSGSTPPTARCSP-------PVRWPARRERRVLRPTAGPRDPGSRARPATRTLPP 39
P +GS PP SP P PA R + P P R P T +LPP
Sbjct: 280 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 335
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 24.6 bits (51), Expect = 9.7
Identities = 19/56 (33%), Positives = 22/56 (39%), Gaps = 7/56 (12%)
Frame = -3
Query: 185 PCSGSTPPTARCSP-------PVRWPARRERRVLRPTAGPRDPGSRARPATRTLPP 39
P +GS PP SP P PA R + P P R P T +LPP
Sbjct: 265 PAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPP 320
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,723,010
Number of Sequences: 27780
Number of extensions: 59085
Number of successful extensions: 267
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 265
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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