Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D17
         (242 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles ...    24   0.88 
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   2.0  
AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription fact...    23   2.0  
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    22   3.6  
AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.          21   4.7  
AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding pr...    21   4.7  
AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription fact...    21   6.2  
M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    21   8.2  

>M93689-2|AAA29367.1|  975|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 975

 Score = 23.8 bits (49), Expect = 0.88
 Identities = 16/51 (31%), Positives = 27/51 (52%)
 Frame = -3

Query: 231 LHNQDSLLAPKCSHLLYNLSISINIVSFPSQYVYRELFQQQTLLHLIHRWF 79
           LH+  S ++PK    +   S S N++SF +  ++R  F+  T L  I+  F
Sbjct: 568 LHSCSSAISPKQHGFMPGRSTSTNLMSFVTN-IFRS-FEAGTQLDAIYTDF 616


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 11/28 (39%), Positives = 18/28 (64%)
 Frame = -1

Query: 206 LPSALIFFITFPFQ*ILYLSLHSTFIEN 123
           LP+ L+++IT P   +L L ++S F  N
Sbjct: 688 LPAGLVYYITIPSMYML-LVIYSVFNMN 714


>AF269154-1|AAF91399.1|   76|Anopheles gambiae transcription factor
           proboscipedia protein.
          Length = 76

 Score = 22.6 bits (46), Expect = 2.0
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 175 FHFNKYCIFPFTVRLSRTFSTT 110
           FHFNKY   P  + ++ +   T
Sbjct: 43  FHFNKYLCRPRRIEIAASLDLT 64


>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 21.8 bits (44), Expect = 3.6
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 87  DGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPV 212
           +G +EE  + E++   RT+  K+Q     KG +E+++  + V
Sbjct: 776 EGETEETTLREELEHSRTILAKLQ-----KGIEEEQAKLDQV 812


>AY578801-1|AAT07306.1|  506|Anopheles gambiae dSmad2 protein.
          Length = 506

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = -3

Query: 147 PSQYVYRELFQQQTLLHLIHRWFQ 76
           PSQ   R+L QQQ   + +H+  Q
Sbjct: 203 PSQVTSRQLQQQQLQPNQLHQQLQ 226


>AJ618927-1|CAF02006.1|  235|Anopheles gambiae odorant-binding
           protein OBPjj7a protein.
          Length = 235

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = +3

Query: 150 KIQYLLKWKGYKEDESTWEPVENLDCEELIK 242
           K Q  ++ +   + +  +EPV+   CE L K
Sbjct: 79  KKQCFMEVRNKNKADGAYEPVDFFSCERLNK 109


>AF269156-1|AAF91401.1|   52|Anopheles gambiae transcription factor
           zen protein.
          Length = 52

 Score = 21.0 bits (42), Expect = 6.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = -2

Query: 175 FHFNKYCIFPFTVRLSRTFSTT 110
           FH N+Y   P  + L+R  + T
Sbjct: 19  FHSNRYLCRPRRIELTRKLALT 40


>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 20.6 bits (41), Expect = 8.2
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = -2

Query: 148 PFTVRLSRTFSTTNSSSLD 92
           P   + SRT ++TN+SSL+
Sbjct: 151 PSVSQPSRTHTSTNASSLN 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 230,203
Number of Sequences: 2352
Number of extensions: 4511
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 11861721
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)