Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D17
(242 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical pr... 67 2e-12
AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromat... 67 2e-12
Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical pr... 64 1e-11
Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical pr... 64 1e-11
Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical pr... 64 1e-11
AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain... 64 1e-11
AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain... 64 1e-11
Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical pr... 49 5e-07
L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans chrom... 48 7e-07
U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical pr... 47 2e-06
U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical pr... 44 1e-05
AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily a... 35 0.007
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 34 0.012
U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical pr... 33 0.036
U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein ... 30 0.19
AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein. 30 0.19
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 28 0.77
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 28 0.77
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 28 0.77
Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical pr... 27 1.3
AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical ... 27 1.3
AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical ... 27 1.3
Z92785-1|CAB07199.2| 299|Caenorhabditis elegans Hypothetical pr... 27 1.8
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 1.8
Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 2.3
Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical pr... 27 2.3
U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical p... 27 2.3
U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical p... 27 2.3
AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein. 27 2.3
AC024882-17|AAF60937.1| 321|Caenorhabditis elegans Serpentine r... 27 2.3
AC084197-37|AAG23463.1| 422|Caenorhabditis elegans Hypothetical... 26 3.1
AL031634-3|CAA21036.1| 556|Caenorhabditis elegans Hypothetical ... 26 4.1
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 25 5.4
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 25 5.4
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 25 5.4
AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical ... 25 5.4
Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical pr... 25 7.1
U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical p... 25 7.1
U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical p... 25 7.1
U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical p... 25 7.1
U37532-1|AAC05308.1| 438|Caenorhabditis elegans HMG-box protein... 25 7.1
CU457740-7|CAM36337.1| 363|Caenorhabditis elegans Hypothetical ... 25 7.1
AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h at... 25 7.1
AF043703-1|AAK21504.1| 437|Caenorhabditis elegans Posterior pha... 25 7.1
AC024821-4|AAF60787.1| 300|Caenorhabditis elegans Hypothetical ... 25 7.1
Z92785-3|CAB07202.1| 326|Caenorhabditis elegans Hypothetical pr... 25 9.4
U13644-2|AAB52684.2| 133|Caenorhabditis elegans Hypothetical pr... 25 9.4
AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical ... 25 9.4
AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical ... 25 9.4
>Z70210-6|CAA94152.1| 184|Caenorhabditis elegans Hypothetical
protein K08H2.6 protein.
Length = 184
Score = 66.9 bits (156), Expect = 2e-12
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 93 SSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELIK 242
SS FVVEKVL+KR +G +Y +KW+G+ E E +WEP+ENL C+ +I+
Sbjct: 32 SSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQ 81
>AF056580-1|AAC78602.1| 184|Caenorhabditis elegans heterochromatin
protein 1 homolog protein.
Length = 184
Score = 66.9 bits (156), Expect = 2e-12
Identities = 26/50 (52%), Positives = 37/50 (74%)
Frame = +3
Query: 93 SSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELIK 242
SS FVVEKVL+KR +G +Y +KW+G+ E E +WEP+ENL C+ +I+
Sbjct: 32 SSSNVFVVEKVLNKRLTRGGSEYYIKWQGFPESECSWEPIENLQCDRMIQ 81
>Z92803-4|CAB54267.2| 303|Caenorhabditis elegans Hypothetical
protein K01G5.2c protein.
Length = 303
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 54 MGKKDKKTETSDGSSEEEFVVEKVLDKRTVK-GKIQYLLKWKGYKEDESTWEPVENLDCE 230
M K K + + F+VEKVLDKRT K G+ ++L++W+G+ E +S+WEP ENL C
Sbjct: 1 MSSKSTKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCV 60
Query: 231 ELI 239
E++
Sbjct: 61 EML 63
>Z92803-3|CAB07243.2| 301|Caenorhabditis elegans Hypothetical
protein K01G5.2b protein.
Length = 301
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 54 MGKKDKKTETSDGSSEEEFVVEKVLDKRTVK-GKIQYLLKWKGYKEDESTWEPVENLDCE 230
M K K + + F+VEKVLDKRT K G+ ++L++W+G+ E +S+WEP ENL C
Sbjct: 1 MSSKSTKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCV 60
Query: 231 ELI 239
E++
Sbjct: 61 EML 63
>Z92803-2|CAB07241.1| 175|Caenorhabditis elegans Hypothetical
protein K01G5.2a protein.
Length = 175
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 54 MGKKDKKTETSDGSSEEEFVVEKVLDKRTVK-GKIQYLLKWKGYKEDESTWEPVENLDCE 230
M K K + + F+VEKVLDKRT K G+ ++L++W+G+ E +S+WEP ENL C
Sbjct: 1 MSSKSTKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCV 60
Query: 231 ELI 239
E++
Sbjct: 61 EML 63
>AF123574-1|AAD21197.1| 175|Caenorhabditis elegans chromo-domain
protein protein.
Length = 175
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 54 MGKKDKKTETSDGSSEEEFVVEKVLDKRTVK-GKIQYLLKWKGYKEDESTWEPVENLDCE 230
M K K + + F+VEKVLDKRT K G+ ++L++W+G+ E +S+WEP ENL C
Sbjct: 1 MSSKSTKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCV 60
Query: 231 ELI 239
E++
Sbjct: 61 EML 63
>AF123573-1|AAD21196.1| 301|Caenorhabditis elegans chromo-domain
protein protein.
Length = 301
Score = 64.5 bits (150), Expect = 1e-11
Identities = 28/63 (44%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +3
Query: 54 MGKKDKKTETSDGSSEEEFVVEKVLDKRTVK-GKIQYLLKWKGYKEDESTWEPVENLDCE 230
M K K + + F+VEKVLDKRT K G+ ++L++W+G+ E +S+WEP ENL C
Sbjct: 1 MSSKSTKRAKIEDPKDNVFMVEKVLDKRTGKAGRDEFLIQWQGFPESDSSWEPRENLQCV 60
Query: 231 ELI 239
E++
Sbjct: 61 EML 63
>Z36753-7|CAA85339.1| 339|Caenorhabditis elegans Hypothetical
protein T09A5.8 protein.
Length = 339
Score = 48.8 bits (111), Expect = 5e-07
Identities = 20/54 (37%), Positives = 32/54 (59%)
Frame = +3
Query: 60 KKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENL 221
++ ++ E +G S+E F VEK+L + + ++W GY DE TWEP E+L
Sbjct: 8 EESREPEAREGKSDEIFEVEKILAHKVTDNLLVLQVRWLGYGADEDTWEPEEDL 61
>L13200-3|AAA28192.1| 304|Caenorhabditis elegans C.elegans
chromodomain proteinprotein 1 protein.
Length = 304
Score = 48.4 bits (110), Expect = 7e-07
Identities = 22/53 (41%), Positives = 33/53 (62%)
Frame = +3
Query: 84 SDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEELIK 242
+DGS E + VE +L+ R KGK ++ +KW GY ++WEP EN+ LI+
Sbjct: 2 ADGS--ELYTVESILEHRKKKGKSEFYIKWLGYDHTHNSWEPKENIVDPTLIE 52
>U41992-6|AAA83357.1| 270|Caenorhabditis elegans Hypothetical
protein F32E10.2 protein.
Length = 270
Score = 46.8 bits (106), Expect = 2e-06
Identities = 29/63 (46%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Frame = +3
Query: 63 KDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKE---DESTWEPVENLD-CE 230
K K T+ SD SS E + VE+VL R VKG YL++WKGY + WE E+LD C+
Sbjct: 73 KKKVTKQSDDSSGE-YAVERVLAHRKVKGSPLYLVQWKGYPHPVWNSEMWE--EDLDNCK 129
Query: 231 ELI 239
+L+
Sbjct: 130 DLL 132
>U61944-4|AAB03120.1| 891|Caenorhabditis elegans Hypothetical
protein T12E12.2 protein.
Length = 891
Score = 44.0 bits (99), Expect = 1e-05
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Frame = +3
Query: 129 DKRTVKGKIQYLLKWKGYKEDESTWEPVENLD-CEELIK 242
DKR K YL+ W+GY E TWEP ENL+ CEEL K
Sbjct: 42 DKRR-HSKYAYLVHWRGYDWKERTWEPEENLENCEELQK 79
>AF067617-5|AAC17559.1| 2957|Caenorhabditis elegans Temporarily
assigned gene nameprotein 192 protein.
Length = 2957
Score = 35.1 bits (77), Expect = 0.007
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 60 KKDKKTETSDGSSEEEFVVEKVLDKRTVK-GKIQYLLKWKGYKEDESTWEPVENLDCEEL 236
K E + + + +V++V+D T G+ L+KWK +E TWEP+E + +++
Sbjct: 1088 KMSSYIEDDEDFNSDFVIVDRVVDLITEDDGQEFVLIKWKSLGYEEVTWEPIEMIPADKV 1147
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 34.3 bits (75), Expect = 0.012
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 4/61 (6%)
Frame = +3
Query: 72 KTETSDGSSEEEFVVEKVLDKRTV--KGKIQYLLKWKGYKEDESTWEPVEN--LDCEELI 239
K D +E+F VEK++ R K K +L+ W+GY S E EN +C++L+
Sbjct: 103 KITNQDDDPDEDFAVEKIIAHRFSGKKNKPLFLVMWRGYPNPVSHSEMWENELSNCKDLL 162
Query: 240 K 242
+
Sbjct: 163 E 163
>U23169-4|AAC46697.1| 706|Caenorhabditis elegans Hypothetical
protein C29H12.5 protein.
Length = 706
Score = 32.7 bits (71), Expect = 0.036
Identities = 17/42 (40%), Positives = 21/42 (50%)
Frame = +3
Query: 96 SEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENL 221
SEE F K K + +L+KW GY E TWEP N+
Sbjct: 77 SEERF---KRTKKPQLISNYFFLVKWLGYGNKEMTWEPESNI 115
>U55373-1|AAC25894.1| 1829|Caenorhabditis elegans Lethal protein 418
protein.
Length = 1829
Score = 30.3 bits (65), Expect = 0.19
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 GSSEEEFVVEKVLDKRT-VKGKIQYLLKWKGYKEDESTWE 206
G E + ++++ ++ K + YL+KWK D++TWE
Sbjct: 483 GIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWE 522
>AF308445-1|AAG29838.1| 1829|Caenorhabditis elegans LET-418 protein.
Length = 1829
Score = 30.3 bits (65), Expect = 0.19
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 GSSEEEFVVEKVLDKRT-VKGKIQYLLKWKGYKEDESTWE 206
G E + ++++ ++ K + YL+KWK D++TWE
Sbjct: 483 GIKPEWMQIHRIINHQSYAKSQQDYLVKWKELSYDQATWE 522
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 28.3 bits (60), Expect = 0.77
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 2/49 (4%)
Frame = +3
Query: 102 EEFVVEKVLDKRTVKGKI--QYLLKWKGYKEDESTWEPVENLDCEELIK 242
E V + R G + +YL+KW G + TWE E + E IK
Sbjct: 313 ERVVAHQTSRDRAADGSMATEYLIKWSGLPYSDCTWED-EKMVAPEQIK 360
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/26 (34%), Positives = 15/26 (57%)
Frame = +3
Query: 144 KGKIQYLLKWKGYKEDESTWEPVENL 221
K + Q+ +KW G+ +TWE +L
Sbjct: 234 KTEQQFFVKWTGWSHLHNTWESENSL 259
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 28.3 bits (60), Expect = 0.77
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 48 LEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVEN 218
LE K K+TE + S +E +KVL K+T K K K K E +E+
Sbjct: 13616 LESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSKSAKSTVDAAETLES 13672
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 48 LEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVK 146
LE K KKTE + S +E +KVL K+T K
Sbjct: 9983 LESETKSKKTEEAPKESVDEKPKKKVLKKKTEK 10015
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 28.3 bits (60), Expect = 0.77
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = +3
Query: 48 LEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVEN 218
LE K K+TE + S +E +KVL K+T K K K K E +E+
Sbjct: 13616 LESETKSKQTEEAPKESVDEKPKKKVLKKKTEKSDSSISQKSKSAKSTVDAAETLES 13672
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 48 LEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVK 146
LE K KKTE + S +E +KVL K+T K
Sbjct: 9983 LESETKSKKTEEAPKESVDEKPKKKVLKKKTEK 10015
>Z81035-4|CAB02737.1| 503|Caenorhabditis elegans Hypothetical
protein C15H11.5 protein.
Length = 503
Score = 27.5 bits (58), Expect = 1.3
Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 60 KKDKKTETSDGSSEEEFV-VEKVLDKRTVKGKIQYLLKWKGYKEDESTWEPVENLDCEE 233
K DK + + G + EF V+ ++ R +IQY +KW + + T E L C E
Sbjct: 28 KCDKISTQNTGKVDTEFYEVQDIVRSRIEGREIQYTVKWTNWNGGD-TEEAERRLVCTE 85
>AC026301-8|AAK68889.1| 302|Caenorhabditis elegans Hypothetical
protein Y54F10BM.10 protein.
Length = 302
Score = 27.5 bits (58), Expect = 1.3
Identities = 13/29 (44%), Positives = 18/29 (62%)
Frame = +3
Query: 150 KIQYLLKWKGYKEDESTWEPVENLDCEEL 236
KI YL +WK K + EP+EN+ E+L
Sbjct: 190 KITYLEQWKLTKSFKYFGEPLENIPLEKL 218
>AC006834-8|AAF40006.1| 865|Caenorhabditis elegans Hypothetical
protein ZK973.2 protein.
Length = 865
Score = 27.5 bits (58), Expect = 1.3
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 51 EMGKKDKKTETSDGSSEEEFVVEKVLDKR 137
E+ K+ K+ + D SSEE+ VEK+ D +
Sbjct: 354 EVQKQRKRPQKQDSSSEEDDEVEKIRDPK 382
>Z92785-1|CAB07199.2| 299|Caenorhabditis elegans Hypothetical
protein F31E9.2 protein.
Length = 299
Score = 27.1 bits (57), Expect = 1.8
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -1
Query: 233 LFTIKILYWLPSALIFFITFPFQ*ILYLSLHSTFIENFF 117
LF LY LPS +++ +TF ++ L TF +FF
Sbjct: 7 LFLASTLYGLPSLILYILTF----VVILRHRKTFDSSFF 41
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 1.8
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +3
Query: 48 LEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVK 146
LE K KKTE + S +E +KVL K+T K
Sbjct: 9963 LESETKSKKTEEAPKESVDEKPKKKVLKKKTEK 9995
>Z67884-5|CAA91810.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 GSSEEEFVVEKVLDKRT-VKGKIQYLLKWKGYKEDESTWE 206
G E + ++++ + K + YL+KWK + +TWE
Sbjct: 495 GVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE 534
>Z67881-4|CAA91798.1| 1787|Caenorhabditis elegans Hypothetical
protein T14G8.1 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 GSSEEEFVVEKVLDKRT-VKGKIQYLLKWKGYKEDESTWE 206
G E + ++++ + K + YL+KWK + +TWE
Sbjct: 495 GVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE 534
>U39850-12|AAZ32806.1| 1336|Caenorhabditis elegans Hypothetical
protein F52C9.1a protein.
Length = 1336
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 148 PFTVRLSRTFSTTNSSSLDPSLVSVF 71
PF V L F +S L+P LVSVF
Sbjct: 871 PFCVDLIEQFHKRSSVQLEPGLVSVF 896
>U39850-11|AAZ32807.1| 1331|Caenorhabditis elegans Hypothetical
protein F52C9.1b protein.
Length = 1331
Score = 26.6 bits (56), Expect = 2.3
Identities = 13/26 (50%), Positives = 15/26 (57%)
Frame = -2
Query: 148 PFTVRLSRTFSTTNSSSLDPSLVSVF 71
PF V L F +S L+P LVSVF
Sbjct: 871 PFCVDLIEQFHKRSSVQLEPGLVSVF 896
>AF308444-1|AAG29837.1| 1787|Caenorhabditis elegans CHD-3 protein.
Length = 1787
Score = 26.6 bits (56), Expect = 2.3
Identities = 11/40 (27%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
Frame = +3
Query: 90 GSSEEEFVVEKVLDKRT-VKGKIQYLLKWKGYKEDESTWE 206
G E + ++++ + K + YL+KWK + +TWE
Sbjct: 495 GVKPEWMQIHRIINHLSYAKSQQDYLVKWKELSYEHATWE 534
>AC024882-17|AAF60937.1| 321|Caenorhabditis elegans Serpentine
receptor, class z protein28 protein.
Length = 321
Score = 26.6 bits (56), Expect = 2.3
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -3
Query: 216 SLLAPKCSHLLYNLSISINIVSFPSQYVYRELFQQQTLLHLIHRWFQFFY 67
+ LA S+ NLS I V Y++ ++F LL I R+F F++
Sbjct: 77 TFLAIVTSNAFLNLSTLILCVCLFYLYIFDQVFHLIILLLAIQRFFLFYF 126
>AC084197-37|AAG23463.1| 422|Caenorhabditis elegans Hypothetical
protein Y73B6BL.25 protein.
Length = 422
Score = 26.2 bits (55), Expect = 3.1
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 138 TVKGKIQYLLKWKGYKEDESTWEPVENLDCEEL 236
T+ I + K K+ + W+PV+N D EL
Sbjct: 143 TISDPILRMYSVKSCKKSDEVWKPVDNDDLPEL 175
>AL031634-3|CAA21036.1| 556|Caenorhabditis elegans Hypothetical
protein Y32B12C.3 protein.
Length = 556
Score = 25.8 bits (54), Expect = 4.1
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 57 GKKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYL 164
GK ETS+G + + F E +LD + K IQ L
Sbjct: 300 GKCCVDEETSEGHAWDRFTKEMILDLQNQKSVIQEL 335
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical protein
ZK1067.1 protein.
Length = 1323
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 42 YYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRT 140
YY E K KK ETS+ + ++ E+V K T
Sbjct: 1289 YYNEPHLKTKKPETSEEAEAVQYENEEVSQKET 1321
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 42 YYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRT 140
YY E K KK ETS+ + ++ E+V K T
Sbjct: 1289 YYNEPHLKTKKPETSEEAEAVQYENEEVSQKET 1321
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 25.4 bits (53), Expect = 5.4
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 42 YYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRT 140
YY E K KK ETS+ + ++ E+V K T
Sbjct: 1340 YYNEPHLKTKKPETSEEAEAVQYENEEVSQKET 1372
>AL032656-1|CAA21730.1| 223|Caenorhabditis elegans Hypothetical
protein Y106G6E.3 protein.
Length = 223
Score = 25.4 bits (53), Expect = 5.4
Identities = 9/24 (37%), Positives = 16/24 (66%)
Frame = +3
Query: 51 EMGKKDKKTETSDGSSEEEFVVEK 122
EM DK+ + D +E+EFV+++
Sbjct: 104 EMASPDKEKKKEDSKAEQEFVLDE 127
>Z81593-6|CAB04740.2| 367|Caenorhabditis elegans Hypothetical
protein T20B3.12 protein.
Length = 367
Score = 25.0 bits (52), Expect = 7.1
Identities = 9/34 (26%), Positives = 22/34 (64%)
Frame = -2
Query: 175 FHFNKYCIFPFTVRLSRTFSTTNSSSLDPSLVSV 74
+++N YC P+++ + + + + +SL +LVS+
Sbjct: 250 YNYNTYCYTPYSLGKTASDAQSYCTSLGSNLVSI 283
>U40029-15|ABD94114.1| 1824|Caenorhabditis elegans Hypothetical
protein F10G7.10c protein.
Length = 1824
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +3
Query: 120 KVLDKRTVKGKIQYLLKWKG---YKEDESTWEPVEN 218
KVL ++T ++Q L W+ +K+D T P +N
Sbjct: 311 KVLTEQTTSNRVQISLDWRTAHMFKDDRRTVLPPDN 346
>U40029-14|ABD94112.1| 2025|Caenorhabditis elegans Hypothetical
protein F10G7.10a protein.
Length = 2025
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +3
Query: 120 KVLDKRTVKGKIQYLLKWKG---YKEDESTWEPVEN 218
KVL ++T ++Q L W+ +K+D T P +N
Sbjct: 311 KVLTEQTTSNRVQISLDWRTAHMFKDDRRTVLPPDN 346
>U40029-13|ABD94113.1| 1884|Caenorhabditis elegans Hypothetical
protein F10G7.10b protein.
Length = 1884
Score = 25.0 bits (52), Expect = 7.1
Identities = 12/36 (33%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = +3
Query: 120 KVLDKRTVKGKIQYLLKWKG---YKEDESTWEPVEN 218
KVL ++T ++Q L W+ +K+D T P +N
Sbjct: 311 KVLTEQTTSNRVQISLDWRTAHMFKDDRRTVLPPDN 346
>U37532-1|AAC05308.1| 438|Caenorhabditis elegans HMG-box protein
protein.
Length = 438
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YLEMGKKDKKTETS---DGSSEEEFVVEKVLDKR 137
Y EM KKDK+T + S+ E + V K K+
Sbjct: 243 YFEMAKKDKETHKERYPEWSARENYAVNKKKTKK 276
>CU457740-7|CAM36337.1| 363|Caenorhabditis elegans Hypothetical
protein C50E10.7 protein.
Length = 363
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = -1
Query: 242 FNELFTIKILYWLPSALIFFITFPF 168
FN L I IL WL + + +TFP+
Sbjct: 61 FNSLIAIVILSWLFAMVGKILTFPY 85
>AF045642-4|AAK67210.1| 226|Caenorhabditis elegans Vacuolar h
atpase protein 8 protein.
Length = 226
Score = 25.0 bits (52), Expect = 7.1
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 33 HINYYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDE 194
H+ ++E + ++K E D +EEEF +EK R V+ + Q ++++ KE +
Sbjct: 14 HMMAFIEQ-EANEKAEEIDAKAEEEFNIEK---GRLVQQQRQKIMEFFEKKEKQ 63
>AF043703-1|AAK21504.1| 437|Caenorhabditis elegans Posterior
pharynx defect protein 1 protein.
Length = 437
Score = 25.0 bits (52), Expect = 7.1
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +3
Query: 45 YLEMGKKDKKTETS---DGSSEEEFVVEKVLDKR 137
Y EM KKDK+T + S+ E + V K K+
Sbjct: 242 YFEMAKKDKETHKERYPEWSARENYAVNKKKTKK 275
>AC024821-4|AAF60787.1| 300|Caenorhabditis elegans Hypothetical
protein Y55B1AR.3 protein.
Length = 300
Score = 25.0 bits (52), Expect = 7.1
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 21 FTVYHINYYLEMGKKDKKT 77
F VY NY ++M KK KKT
Sbjct: 277 FHVYITNYEIQMKKKAKKT 295
>Z92785-3|CAB07202.1| 326|Caenorhabditis elegans Hypothetical
protein F31E9.5 protein.
Length = 326
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/41 (24%), Positives = 24/41 (58%)
Frame = -3
Query: 189 LLYNLSISINIVSFPSQYVYRELFQQQTLLHLIHRWFQFFY 67
LL ++++I + +QY+ ++F TL+ + R+ +F+
Sbjct: 101 LLLLITMAITPICIYTQYIITQVFHLITLILSLERFIVYFF 141
>U13644-2|AAB52684.2| 133|Caenorhabditis elegans Hypothetical
protein F56D2.8 protein.
Length = 133
Score = 24.6 bits (51), Expect = 9.4
Identities = 10/20 (50%), Positives = 14/20 (70%)
Frame = +3
Query: 123 VLDKRTVKGKIQYLLKWKGY 182
+L K+T KI+Y KWKG+
Sbjct: 105 LLSKKTTIFKIKYENKWKGW 124
>AF022973-2|AAC25800.2| 527|Caenorhabditis elegans Hypothetical
protein F25G6.7a protein.
Length = 527
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/69 (20%), Positives = 28/69 (40%)
Frame = +3
Query: 27 VYHINYYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWE 206
V I Y+ +G ++ +E +F+ + K + + + WK + + W
Sbjct: 241 VLFIFSYIFLGADKPSKQSCISDNELKFITISNQSEDVGKKRTERKVPWKNILKSGAVWA 300
Query: 207 PVENLDCEE 233
V +L C E
Sbjct: 301 SVISLVCHE 309
>AF022973-1|AAT81194.1| 513|Caenorhabditis elegans Hypothetical
protein F25G6.7b protein.
Length = 513
Score = 24.6 bits (51), Expect = 9.4
Identities = 14/69 (20%), Positives = 28/69 (40%)
Frame = +3
Query: 27 VYHINYYLEMGKKDKKTETSDGSSEEEFVVEKVLDKRTVKGKIQYLLKWKGYKEDESTWE 206
V I Y+ +G ++ +E +F+ + K + + + WK + + W
Sbjct: 227 VLFIFSYIFLGADKPSKQSCISDNELKFITISNQSEDVGKKRTERKVPWKNILKSGAVWA 286
Query: 207 PVENLDCEE 233
V +L C E
Sbjct: 287 SVISLVCHE 295
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,066,137
Number of Sequences: 27780
Number of extensions: 87746
Number of successful extensions: 469
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 441
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 60
effective length of database: 11,073,398
effective search space used: 221467960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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