Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D15
         (233 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y13758-1|CAA74083.1|  848|Homo sapiens transient receptor potent...    27   8.1  
U47050-1|AAC51653.1|  848|Homo sapiens calcium influx channel pr...    27   8.1  
BC093684-1|AAH93684.1|  848|Homo sapiens transient receptor pote...    27   8.1  
BC093682-1|AAH93682.1|  848|Homo sapiens transient receptor pote...    27   8.1  
AY865574-1|AAW62292.1|  921|Homo sapiens N-terminally extended t...    27   8.1  

>Y13758-1|CAA74083.1|  848|Homo sapiens transient receptor potential
           related channel 3 protein protein.
          Length = 848

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 106 SNYQSIILKYDHLFIQN 56
           S   S++LKYDH FI+N
Sbjct: 629 SEVTSVVLKYDHKFIEN 645


>U47050-1|AAC51653.1|  848|Homo sapiens calcium influx channel
           protein.
          Length = 848

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 106 SNYQSIILKYDHLFIQN 56
           S   S++LKYDH FI+N
Sbjct: 629 SEVTSVVLKYDHKFIEN 645


>BC093684-1|AAH93684.1|  848|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 3 protein.
          Length = 848

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 106 SNYQSIILKYDHLFIQN 56
           S   S++LKYDH FI+N
Sbjct: 629 SEVTSVVLKYDHKFIEN 645


>BC093682-1|AAH93682.1|  848|Homo sapiens transient receptor
           potential cation channel, subfamily C, member 3 protein.
          Length = 848

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 106 SNYQSIILKYDHLFIQN 56
           S   S++LKYDH FI+N
Sbjct: 629 SEVTSVVLKYDHKFIEN 645


>AY865574-1|AAW62292.1|  921|Homo sapiens N-terminally extended type
           3 canonical transient receptor potential channel
           protein.
          Length = 921

 Score = 27.5 bits (58), Expect = 8.1
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = -2

Query: 106 SNYQSIILKYDHLFIQN 56
           S   S++LKYDH FI+N
Sbjct: 702 SEVTSVVLKYDHKFIEN 718


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,187,262
Number of Sequences: 237096
Number of extensions: 402820
Number of successful extensions: 447
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 447
length of database: 76,859,062
effective HSP length: 56
effective length of database: 63,581,686
effective search space used: 1335215406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)