Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D15
         (233 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.       20   3.5  
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    20   3.5  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   3.5  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    20   4.6  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    19   6.0  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    19   8.0  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    19   8.0  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    19   8.0  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    19   8.0  

>DQ288391-1|ABC41341.1|  630|Apis mellifera vasa protein protein.
          Length = 630

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 6/16 (37%), Positives = 13/16 (81%)
 Frame = -3

Query: 210 EIKFVRQQFLNKHIFL 163
           E++ + ++FLN ++FL
Sbjct: 395 EVQHLARRFLNNYLFL 410


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 136 CGL*TLDINQENVFVQKLLSN 198
           CG  T  +NQ   FV+  LSN
Sbjct: 25  CGRDTYALNQSLHFVRASLSN 45


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 3.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +1

Query: 136 CGL*TLDINQENVFVQKLLSN 198
           CG  T  +NQ   FV+  LSN
Sbjct: 115 CGRDTYALNQSLHFVRASLSN 135


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 19.8 bits (39), Expect = 4.6
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +1

Query: 67  INDHISILYFDN 102
           IND +++LYF N
Sbjct: 75  INDVLNVLYFIN 86


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 19.4 bits (38), Expect = 6.0
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = +2

Query: 152 LILIRKMCLFKNCCLTNLISIVLLM 226
           +I    +  F+N  L   + IVLL+
Sbjct: 1   MIFTNNIAAFQNVVLVKKVKIVLLI 25



 Score = 19.4 bits (38), Expect = 6.0
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -1

Query: 68  IYPKYDKIENN 36
           I+PKYD IE +
Sbjct: 241 IHPKYDIIEKD 251


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +1

Query: 178 VQKLLSNELDFN 213
           +QK+++N+ +FN
Sbjct: 388 MQKIINNDFNFN 399


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 5/13 (38%), Positives = 9/13 (69%)
 Frame = +3

Query: 108 SHSTSDVYALWTL 146
           SH+T D+  +W +
Sbjct: 154 SHTTQDLVFIWNM 166


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 1   LNSARGHSLI 30
           L  ARGHSL+
Sbjct: 639 LTKARGHSLL 648


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 19.0 bits (37), Expect = 8.0
 Identities = 6/9 (66%), Positives = 7/9 (77%)
 Frame = +1

Query: 115 RLATCMLCG 141
           +L TC LCG
Sbjct: 4   KLFTCQLCG 12


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,985
Number of Sequences: 438
Number of extensions: 956
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used:  3772710
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)