Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D14
         (220 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12 pro...    28   4.7  
Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12 pro...    28   4.7  
U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12 pro...    28   4.7  
BC104165-1|AAI04166.1|  243|Homo sapiens hypothetical gene suppo...    27   8.2  

>Y07759-2|CAA69036.1| 1828|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1828

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 171 QNFYSFKTLCSSLNLVEFKLCRM*MAVNQ*YFK 73
           +N++ F  LC+S  L EFK+ R+  A N  Y K
Sbjct: 257 RNYHIFYQLCASAKLPEFKMLRLGNADNFNYTK 289


>Y07759-1|CAA69035.1| 1855|Homo sapiens mysoin heavy chain 12
           protein.
          Length = 1855

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 171 QNFYSFKTLCSSLNLVEFKLCRM*MAVNQ*YFK 73
           +N++ F  LC+S  L EFK+ R+  A N  Y K
Sbjct: 257 RNYHIFYQLCASAKLPEFKMLRLGNADNFNYTK 289


>U90942-1|AAD00702.1| 1855|Homo sapiens myosin heavy chain 12
           protein.
          Length = 1855

 Score = 28.3 bits (60), Expect = 4.7
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = -2

Query: 171 QNFYSFKTLCSSLNLVEFKLCRM*MAVNQ*YFK 73
           +N++ F  LC+S  L EFK+ R+  A N  Y K
Sbjct: 257 RNYHIFYQLCASAKLPEFKMLRLGNADNFNYTK 289


>BC104165-1|AAI04166.1|  243|Homo sapiens hypothetical gene
           supported by BC067869 protein.
          Length = 243

 Score = 27.5 bits (58), Expect = 8.2
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +1

Query: 34  QFLRSWIINILVYFKVSLVHCHL 102
           Q  R +++ IL+ F VSLV C++
Sbjct: 205 QLKRDYVVPILIIFNVSLVQCNM 227


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,300,710
Number of Sequences: 237096
Number of extensions: 390561
Number of successful extensions: 382
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 382
length of database: 76,859,062
effective HSP length: 51
effective length of database: 64,767,166
effective search space used: 1360110486
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)