Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D14
         (220 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    22   0.75 
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    20   3.0  
L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.        19   6.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    19   9.2  

>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 0.75
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -1

Query: 220 NNNNHNLFMNTPLY 179
           NNNN+N + N  LY
Sbjct: 314 NNNNYNNYNNKKLY 327


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 20.2 bits (40), Expect = 3.0
 Identities = 5/15 (33%), Positives = 11/15 (73%)
 Frame = +1

Query: 49  WIINILVYFKVSLVH 93
           WI + + Y+K++ +H
Sbjct: 66  WIFSCIGYYKLNKIH 80


>L10710-1|AAA27730.1|  382|Apis mellifera hyaluronidase protein.
          Length = 382

 Score = 19.0 bits (37), Expect = 6.9
 Identities = 7/18 (38%), Positives = 10/18 (55%)
 Frame = +1

Query: 67  VYFKVSLVHCHLHTAQFE 120
           VY+ V    CH +  +FE
Sbjct: 45  VYWNVPTFMCHKYGLRFE 62


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 18.6 bits (36), Expect = 9.2
 Identities = 8/36 (22%), Positives = 15/36 (41%)
 Frame = +2

Query: 47  VGLLIFLCILKYHWFTAIYIRHSLNSTKFNDEHNVL 154
           + L++   I+   W T +Y    +      D H V+
Sbjct: 80  INLILLQNIIDICWITMVYSLLGIIIAYTGDVHGVI 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,359
Number of Sequences: 438
Number of extensions: 1003
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 46
effective length of database: 126,195
effective search space used:  3281070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)