Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D13
         (247 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   1.2  
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    22   3.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    21   8.5  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         21   8.5  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 9/31 (29%), Positives = 18/31 (58%)
 Frame = -3

Query: 212 VPLPELILEKYHKSLLYCESTLEPALYLLPA 120
           +P+PE+I  +YH   L+ +  +   L+ + A
Sbjct: 392 IPIPEIIPNRYHAGWLHDQLDMGSMLHPINA 422


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 206  LPELILEKYHKSLLYCESTL 147
            + ELI +KYHK L +  + L
Sbjct: 1349 IAELIADKYHKILRHAGAQL 1368


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
            transcriptase protein.
          Length = 1049

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = +1

Query: 1    ARGSDWVGWVITAEGE*RSPVVTDQI*SYSSRSLYDN*LVAGSK*RAGS 147
            ARG+  +G VI    E R+P+    + +   RS+ +   V  S   A S
Sbjct: 866  ARGNQLLGVVIRTTNEFRNPMCIKAVYNCIVRSVLEYSCVVWSPTTASS 914


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -1

Query: 145  NRLSTCYRRL 116
            NRL+ CY+RL
Sbjct: 2011 NRLTDCYQRL 2020


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 237,324
Number of Sequences: 2352
Number of extensions: 3475
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 563,979
effective HSP length: 53
effective length of database: 439,323
effective search space used: 12301044
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)