Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D13
         (247 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p pro...    26   6.1  
AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA...    26   6.1  
AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB...    26   6.1  

>AY119591-1|AAM50245.1|   55|Drosophila melanogaster LD16427p
           protein.
          Length = 55

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 197 LILEKYHKSLLYCESTLEPALYL 129
           L+L+ Y   L YC  TL+ ALYL
Sbjct: 13  LLLQTYRLRLEYCLCTLQIALYL 35


>AE014297-795|AAF54274.1|   55|Drosophila melanogaster CG11760-PA,
           isoform A protein.
          Length = 55

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 197 LILEKYHKSLLYCESTLEPALYL 129
           L+L+ Y   L YC  TL+ ALYL
Sbjct: 13  LLLQTYRLRLEYCLCTLQIALYL 35


>AE014297-794|AAN13397.1|  149|Drosophila melanogaster CG11760-PB,
           isoform B protein.
          Length = 149

 Score = 26.2 bits (55), Expect = 6.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -3

Query: 197 LILEKYHKSLLYCESTLEPALYL 129
           L+L+ Y   L YC  TL+ ALYL
Sbjct: 107 LLLQTYRLRLEYCLCTLQIALYL 129


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,346,984
Number of Sequences: 53049
Number of extensions: 163394
Number of successful extensions: 305
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 305
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 305
length of database: 24,988,368
effective HSP length: 61
effective length of database: 21,752,379
effective search space used: 435047580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)