Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D11
         (359 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.         23   4.6  
CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative calcium/c...    22   8.0  
AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcript...    22   8.0  
AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein p...    22   8.0  

>AY578799-1|AAT07304.1|  679|Anopheles gambiae brinker protein.
          Length = 679

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 12/60 (20%), Positives = 26/60 (43%)
 Frame = +3

Query: 132 CQKIGIDTGDRLNVNSKKRKFLVKGPLAPDSEFPPFQDFDVVHNYLQSDLRKAQVRLRKR 311
           C++    T   +  ++K+    + GP+A      P +   +   YL  +  K Q + ++R
Sbjct: 418 CRRSSDATSSTVTSSNKRSSSAMSGPIATPDTSRPAKSVKLFKPYLLDEEPKQQSQQQQR 477


>CR954256-9|CAJ14150.1|  872|Anopheles gambiae putative
           calcium/calmodulin-dependentprotein kinase, CAKI
           protein.
          Length = 872

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/30 (36%), Positives = 14/30 (46%)
 Frame = +3

Query: 93  DFDKKMNRLIACVCQKIGIDTGDRLNVNSK 182
           D+D   + LI C    I    GD L + SK
Sbjct: 573 DYDPLDDELIPCAQAGIAFRVGDILQIISK 602


>AB090818-2|BAC57912.1|  988|Anopheles gambiae reverse transcriptase
           protein.
          Length = 988

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +3

Query: 240 QDFDVVHNYLQSDLRKAQVRLRKRGQKGHWS 332
           QD  V    +QSD+RK Q     R  +  W+
Sbjct: 847 QDEKVASGGVQSDIRKRQREETMRRWQDQWT 877


>AB090813-1|BAC57901.1|  724|Anopheles gambiae gag-like protein
           protein.
          Length = 724

 Score = 21.8 bits (44), Expect = 8.0
 Identities = 9/41 (21%), Positives = 22/41 (53%)
 Frame = +2

Query: 101 QEDEQADRLRLPEDRHRHRRPSQRELEETQVPRQGPARARL 223
           Q+ +Q    +  + R + +RP Q+  ++ +  ++ PA+  L
Sbjct: 458 QQRQQQQPQQQQQQRPQQQRPQQQRPQQQRSQQRKPAKPEL 498


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 318,178
Number of Sequences: 2352
Number of extensions: 5207
Number of successful extensions: 15
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 26654730
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)