BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D09
(220 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q152R4 Cluster: SCP-related protein; n=1; Bombyx mori|R... 63 1e-09
UniRef50_UPI00015B4F63 Cluster: PREDICTED: similar to GA21107-PA... 36 0.13
UniRef50_UPI0000D55575 Cluster: PREDICTED: similar to Maltase-gl... 31 5.1
UniRef50_A2TXR0 Cluster: Putative outer membrane protein probabl... 31 5.1
UniRef50_Q6MDA5 Cluster: Putative serine/threonine phosphoprotei... 30 8.8
>UniRef50_Q152R4 Cluster: SCP-related protein; n=1; Bombyx mori|Rep:
SCP-related protein - Bombyx mori (Silk moth)
Length = 216
Score = 62.9 bits (146), Expect = 1e-09
Identities = 26/58 (44%), Positives = 37/58 (63%)
Frame = +2
Query: 47 LLILAMVVCIGHVHSKSLLNLSCKQIKDFVNGHKYRRQLLAKGQVSGHPAATGRKYMV 220
L+ + + C + + L LSC I+ FVNGH RR+ +AKG++SG PAAT KYM+
Sbjct: 5 LIFVVALACFQSIDCRKLQPLSCDDIRQFVNGHNLRREQIAKGEISGQPAATQMKYMI 62
>UniRef50_UPI00015B4F63 Cluster: PREDICTED: similar to GA21107-PA;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
GA21107-PA - Nasonia vitripennis
Length = 232
Score = 36.3 bits (80), Expect = 0.13
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Frame = +2
Query: 32 MAVRALLILAMVVCIGHVHSKSLLN--LSCKQIKDFVNGHKYRRQLLAKGQVSGHPAATG 205
+ + +++L C+ + KS++ LSC+ ++ ++ H RQL+A GQV+G P+A
Sbjct: 8 LVLMMMMMLCATRCLA-CNGKSMMRTGLSCQDKRNILDEHNRLRQLVALGQVNGQPSAKM 66
Query: 206 RKYMV 220
MV
Sbjct: 67 MMEMV 71
>UniRef50_UPI0000D55575 Cluster: PREDICTED: similar to
Maltase-glucoamylase, intestinal; n=1; Tribolium
castaneum|Rep: PREDICTED: similar to
Maltase-glucoamylase, intestinal - Tribolium castaneum
Length = 845
Score = 31.1 bits (67), Expect = 5.1
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 85 DVSNTYDHCQNKKRAYGHCSVVCYH 11
D++ TYD+C N K + + + +CYH
Sbjct: 81 DINATYDYCTNIKCCFDNATRLCYH 105
>UniRef50_A2TXR0 Cluster: Putative outer membrane protein probably
involved in nutrient binding; n=1; Polaribacter
dokdonensis MED152|Rep: Putative outer membrane protein
probably involved in nutrient binding - Polaribacter
dokdonensis MED152
Length = 531
Score = 31.1 bits (67), Expect = 5.1
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 138 TDTSIGDNYWLRVRYQDILL 197
TD IGDN W+ +RY D+LL
Sbjct: 404 TDGEIGDNDWIVLRYADVLL 423
>UniRef50_Q6MDA5 Cluster: Putative serine/threonine phosphoprotein
phosphatase; n=1; Candidatus Protochlamydia amoebophila
UWE25|Rep: Putative serine/threonine phosphoprotein
phosphatase - Protochlamydia amoebophila (strain UWE25)
Length = 259
Score = 30.3 bits (65), Expect = 8.8
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 68 VCIGHVHSKSLLNLSCKQIKDFVNGHKYRRQLLAKGQVSGHPA 196
V GHV + L +K H R+L+ GQ+S H A
Sbjct: 121 VIFGHVGDSRIYRLRDNNLKQITQDHSLLRELIELGQLSEHQA 163
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 233,318,298
Number of Sequences: 1657284
Number of extensions: 3781487
Number of successful extensions: 9565
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9322
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9564
length of database: 575,637,011
effective HSP length: 51
effective length of database: 491,115,527
effective search space used: 10313426067
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -