Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D09
(220 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve co... 21 1.2
AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory recept... 21 1.5
EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetyla... 21 2.0
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 21 2.0
AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory recept... 19 4.6
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ... 19 6.1
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ... 19 6.1
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ... 19 6.1
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ... 19 6.1
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 19 6.1
AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical pro... 19 6.1
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 19 6.1
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 19 6.1
>AY695256-1|AAW21973.1| 168|Tribolium castaneum ventral nerve cord
defective protein protein.
Length = 168
Score = 21.4 bits (43), Expect = 1.2
Identities = 7/23 (30%), Positives = 14/23 (60%)
Frame = +2
Query: 86 HSKSLLNLSCKQIKDFVNGHKYR 154
H S++ L+ Q+K + H+Y+
Sbjct: 72 HLASIIRLTPTQVKIWFQNHRYK 94
>AM292369-1|CAL23181.1| 408|Tribolium castaneum gustatory receptor
candidate 48 protein.
Length = 408
Score = 21.0 bits (42), Expect = 1.5
Identities = 12/46 (26%), Positives = 18/46 (39%)
Frame = -2
Query: 216 IYFLPVAAGCPDT*PLASNCLLYLCPLTKSLICLHDKFSRDLLWTC 79
+Y L + C T NC +L L S + + +LW C
Sbjct: 251 MYHLAILWSCTST-----NCPRFLIMLALSYTVIQEVMLFTILWNC 291
>EU019713-1|ABU25225.1| 528|Tribolium castaneum chitin deacetylase
2B protein.
Length = 528
Score = 20.6 bits (41), Expect = 2.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 159 NYWLRVRYQDILLQLEG 209
NYW + Y D L ++ G
Sbjct: 257 NYWSQGSYDDWLAEMAG 273
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 20.6 bits (41), Expect = 2.0
Identities = 7/17 (41%), Positives = 10/17 (58%)
Frame = +3
Query: 159 NYWLRVRYQDILLQLEG 209
NYW + Y D L ++ G
Sbjct: 264 NYWSQGSYDDWLAEMAG 280
>AM292349-1|CAL23161.1| 248|Tribolium castaneum gustatory receptor
candidate 28 protein.
Length = 248
Score = 19.4 bits (38), Expect = 4.6
Identities = 5/22 (22%), Positives = 12/22 (54%)
Frame = +3
Query: 153 GDNYWLRVRYQDILLQLEGNIW 218
GD + RV + + ++ ++W
Sbjct: 218 GDEMYFRVAFPSVFTLIDYSLW 239
>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
variant 2 protein.
Length = 1558
Score = 19.0 bits (37), Expect = 6.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 74 IGHVHSKSLLNLSCKQIKD 130
I H+ + + LNL C + K+
Sbjct: 1353 IAHILASTELNLCCTKKKE 1371
>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
variant 1 protein.
Length = 1558
Score = 19.0 bits (37), Expect = 6.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 74 IGHVHSKSLLNLSCKQIKD 130
I H+ + + LNL C + K+
Sbjct: 1353 IAHILASTELNLCCTKKKE 1371
>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
protein.
Length = 1558
Score = 19.0 bits (37), Expect = 6.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 74 IGHVHSKSLLNLSCKQIKD 130
I H+ + + LNL C + K+
Sbjct: 1353 IAHILASTELNLCCTKKKE 1371
>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
protein.
Length = 1558
Score = 19.0 bits (37), Expect = 6.1
Identities = 7/19 (36%), Positives = 12/19 (63%)
Frame = +2
Query: 74 IGHVHSKSLLNLSCKQIKD 130
I H+ + + LNL C + K+
Sbjct: 1353 IAHILASTELNLCCTKKKE 1371
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 19.0 bits (37), Expect = 6.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Frame = +1
Query: 94 VSTKLVMQTNQRFRQRTQV*ETITG*GSGIR 186
V T++ QTN F + +++T +G+R
Sbjct: 193 VGTQIHQQTNHTFYPWMAIADSMTFGANGLR 223
>AM712901-1|CAN84640.1| 205|Tribolium castaneum hypothetical
protein protein.
Length = 205
Score = 19.0 bits (37), Expect = 6.1
Identities = 8/32 (25%), Positives = 13/32 (40%)
Frame = +2
Query: 62 MVVCIGHVHSKSLLNLSCKQIKDFVNGHKYRR 157
+ C+G + L L C + KYR+
Sbjct: 5 LTACVGSAIAGFLFLLICDSYLKIYHKEKYRK 36
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 19.0 bits (37), Expect = 6.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 87 IVSLY*TCHANKSKISSTDTSIGDNYWLRVRYQDILLQ 200
I++L + N+ ISST TSI + ++++ L++
Sbjct: 377 IMNLNGYANVNRKLISSTVTSIATYLVMLMQFRLTLMR 414
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 19.0 bits (37), Expect = 6.1
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +3
Query: 87 IVSLY*TCHANKSKISSTDTSIGDNYWLRVRYQDILLQ 200
I++L + N+ ISST TSI + ++++ L++
Sbjct: 377 IMNLNGYANVNRKLISSTVTSIATYLVMLMQFRLTLMR 414
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,498
Number of Sequences: 336
Number of extensions: 1008
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 45
effective length of database: 107,465
effective search space used: 2901555
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (18.9 bits)
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