Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D09
(220 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical pr... 29 0.45
AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical ... 27 1.4
U32305-20|AAK18863.1| 796|Caenorhabditis elegans Worm armadillo... 26 3.2
AF013951-1|AAC47748.1| 796|Caenorhabditis elegans wrm-1 protein. 26 3.2
AF045640-1|AAC02572.2| 121|Caenorhabditis elegans Hypothetical ... 25 5.5
Z49908-5|CAA90096.1| 353|Caenorhabditis elegans Hypothetical pr... 25 7.3
AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical... 25 7.3
AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical... 25 7.3
AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical... 25 7.3
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 25 7.3
>Z77659-1|CAB01164.1| 401|Caenorhabditis elegans Hypothetical
protein F23B12.1 protein.
Length = 401
Score = 29.1 bits (62), Expect = 0.45
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -2
Query: 183 DT*PLASNCLLYLCPLTKSLICLHDKFSRDLL 88
D LA NC+ ++K +IC+H S DL+
Sbjct: 217 DAFQLAFNCMPLCAVVSKKIICMHGGISEDLI 248
>AF036692-9|AAB88330.1| 389|Caenorhabditis elegans Hypothetical
protein C44B12.7 protein.
Length = 389
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/17 (58%), Positives = 13/17 (76%)
Frame = -2
Query: 168 ASNCLLYLCPLTKSLIC 118
+SNC+L L PL SL+C
Sbjct: 134 SSNCVLLLAPLINSLVC 150
>U32305-20|AAK18863.1| 796|Caenorhabditis elegans Worm armadillo
protein 1 protein.
Length = 796
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 101 LNLSCKQIKDFVNGHKYRRQLLAKGQVSGHPAATGRKY 214
+N + +FVN Y+R L QVS + T R+Y
Sbjct: 129 VNTEMGEFNNFVNQAPYQRALTRVSQVSENQDPTNRQY 166
>AF013951-1|AAC47748.1| 796|Caenorhabditis elegans wrm-1 protein.
Length = 796
Score = 26.2 bits (55), Expect = 3.2
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 101 LNLSCKQIKDFVNGHKYRRQLLAKGQVSGHPAATGRKY 214
+N + +FVN Y+R L QVS + T R+Y
Sbjct: 129 VNTEMGEFNNFVNQAPYQRALTRVSQVSENQDPTNRQY 166
>AF045640-1|AAC02572.2| 121|Caenorhabditis elegans Hypothetical
protein C11D2.3 protein.
Length = 121
Score = 25.4 bits (53), Expect = 5.5
Identities = 12/48 (25%), Positives = 25/48 (52%)
Frame = +3
Query: 75 LDTSIVSLY*TCHANKSKISSTDTSIGDNYWLRVRYQDILLQLEGNIW 218
L T + +L T HAN+ + ++ + + W R + + +L+G +W
Sbjct: 56 LTTQLHALRQTHHANQQVRKNEESQLEEIAWRIEREEKRIKKLDGKLW 103
>Z49908-5|CAA90096.1| 353|Caenorhabditis elegans Hypothetical
protein C07E3.5 protein.
Length = 353
Score = 25.0 bits (52), Expect = 7.3
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 4 IVRGNIQLNNGRTRASYFGNGRMY 75
I R NI+L + + R YF RMY
Sbjct: 219 IHRKNIRLTDDQVREEYFNRQRMY 242
>AC084158-40|AAM15618.2| 354|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1d protein.
Length = 354
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANKSKISSTDTSIGD-----NYWL 170
W + LD ++++ TC K + T S+ D NYW+
Sbjct: 87 WEFKLDGEVLTMTFTCDGEKYPMYFTPRSVIDFQMRNNYWI 127
>AC084158-39|AAM15616.2| 483|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1b protein.
Length = 483
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANKSKISSTDTSIGD-----NYWL 170
W + LD ++++ TC K + T S+ D NYW+
Sbjct: 87 WEFKLDGEVLTMTFTCDGEKYPMYFTPRSVIDFQMRNNYWI 127
>AC084158-37|AAM15615.2| 486|Caenorhabditis elegans Hypothetical
protein Y69A2AR.1a protein.
Length = 486
Score = 25.0 bits (52), Expect = 7.3
Identities = 12/41 (29%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 63 WSYVLDTSIVSLY*TCHANKSKISSTDTSIGD-----NYWL 170
W + LD ++++ TC K + T S+ D NYW+
Sbjct: 90 WEFKLDGEVLTMTFTCDGEKYPMYFTPRSVIDFQMRNNYWI 130
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 25.0 bits (52), Expect = 7.3
Identities = 8/25 (32%), Positives = 12/25 (48%)
Frame = -2
Query: 114 HDKFSRDLLWTCPIHTTIAKIRSAR 40
H+ +DLLW P ++R R
Sbjct: 40 HESVKKDLLWAAPYDARFPQVRKQR 64
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,407,967
Number of Sequences: 27780
Number of extensions: 92329
Number of successful extensions: 244
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 244
length of database: 12,740,198
effective HSP length: 52
effective length of database: 11,295,638
effective search space used: 225912760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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