Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D08
         (281 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    24   0.27 
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   2.5  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   2.5  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   2.5  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    20   5.8  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    19   7.7  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    19   7.7  

>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 24.2 bits (50), Expect = 0.27
 Identities = 9/48 (18%), Positives = 23/48 (47%)
 Frame = -2

Query: 211 VCXXXXXXXXXXXKVFVKFFCKEIKDMLFAWTITAFQDLNVLILCILA 68
           +C            ++V+ +CKEI+    ++ I    D  +L++ +++
Sbjct: 47  ICFLLSTILGTCWIIYVRIYCKEIRFFEISFEILGSLDSLILLMVLVS 94


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.
          Length = 322

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 55  NFFNFVRAHSDSLAS 11
           NF+ +++AH DS A+
Sbjct: 167 NFYPWMKAHGDSSAT 181


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
           transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 55  NFFNFVRAHSDSLAS 11
           NF+ +++AH DS A+
Sbjct: 167 NFYPWMKAHGDSSAT 181


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 55  NFFNFVRAHSDSLAS 11
           NF+ +++AH DS A+
Sbjct: 167 NFYPWMKAHGDSSAT 181


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 19.8 bits (39), Expect = 5.8
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -1

Query: 107 ISRSECLDFVHFSVNRL 57
           ++R +CL ++  S NRL
Sbjct: 390 LARFKCLSWLDLSYNRL 406


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 19.4 bits (38), Expect = 7.7
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -1

Query: 122 MDYHCISRSECLDFVH 75
           + YH  S S+ LDF++
Sbjct: 192 LSYHVPSLSKYLDFIN 207


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 19.4 bits (38), Expect = 7.7
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +2

Query: 89  DIQILKCSDSPCKK 130
           D + ++CS+SP +K
Sbjct: 56  DFRKIQCSNSPLRK 69


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,506
Number of Sequences: 336
Number of extensions: 1282
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4790565
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)