Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D08
(281 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine dehydro... 27 8.4
U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine dehydro... 27 8.4
CR457269-1|CAG33550.1| 826|Homo sapiens STATIP1 protein. 27 8.4
BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine dehyd... 27 8.4
BT006740-1|AAP35386.1| 173|Homo sapiens dihydropyrimidine dehyd... 27 8.4
BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine dehyd... 27 8.4
BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine dehyd... 27 8.4
BC108742-1|AAI08743.1| 173|Homo sapiens DPYD protein protein. 27 8.4
BC064027-1|AAH64027.1| 173|Homo sapiens DPYD protein protein. 27 8.4
BC008379-1|AAH08379.1| 173|Homo sapiens DPYD protein protein. 27 8.4
AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine dehyd... 27 8.4
AK222791-1|BAD96511.1| 826|Homo sapiens elongator protein 2 var... 27 8.4
AK001741-1|BAA91874.1| 826|Homo sapiens protein ( Homo sapiens ... 27 8.4
AF403223-1|AAQ03093.1| 705|Homo sapiens SHINC-2 protein. 27 8.4
AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine dehyd... 27 8.4
>U20938-1|AAB51366.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>U09178-1|AAA57474.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>CR457269-1|CAG33550.1| 826|Homo sapiens STATIP1 protein.
Length = 826
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 83 NQDIQILKCSDSPCKKHIFYFFTEKFDENL 172
N D+ IL C + C+ HIF ++F + L
Sbjct: 172 NTDVPILACGNDDCRIHIFAQQNDQFQKVL 201
>BX908805-1|CAI15125.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>BT006740-1|AAP35386.1| 173|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 173
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>BC131778-1|AAI31779.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>BC131777-1|AAI31778.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>BC108742-1|AAI08743.1| 173|Homo sapiens DPYD protein protein.
Length = 173
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>BC064027-1|AAH64027.1| 173|Homo sapiens DPYD protein protein.
Length = 173
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>BC008379-1|AAH08379.1| 173|Homo sapiens DPYD protein protein.
Length = 173
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>AL356457-3|CAH70570.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
>AK222791-1|BAD96511.1| 826|Homo sapiens elongator protein 2
variant protein.
Length = 826
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 83 NQDIQILKCSDSPCKKHIFYFFTEKFDENL 172
N D+ IL C + C+ HIF ++F + L
Sbjct: 172 NTDVPILACGNDDCRIHIFAQQNDQFQKVL 201
>AK001741-1|BAA91874.1| 826|Homo sapiens protein ( Homo sapiens
cDNA FLJ10879 fis, clone NT2RP4001896, weakly similar to
VEGETATIBLE INCOMPATIBILITY PROTEIN HET-E-1. ).
Length = 826
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 83 NQDIQILKCSDSPCKKHIFYFFTEKFDENL 172
N D+ IL C + C+ HIF ++F + L
Sbjct: 172 NTDVPILACGNDDCRIHIFAQQNDQFQKVL 201
>AF403223-1|AAQ03093.1| 705|Homo sapiens SHINC-2 protein.
Length = 705
Score = 27.5 bits (58), Expect = 8.4
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +2
Query: 83 NQDIQILKCSDSPCKKHIFYFFTEKFDENL 172
N D+ IL C + C+ HIF ++F + L
Sbjct: 172 NTDVPILACGNDDCRIHIFAQQNDQFQKVL 201
>AB003063-1|BAA89789.1| 1025|Homo sapiens dihydropyrimidine
dehydrogenase protein.
Length = 1025
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 44 IKKITSGLR*NAQNQDIQILKCSDSPCKK 130
IK T G R A + ++ LKC+D+PC+K
Sbjct: 62 IKHTTLGER-GALREAMRCLKCADAPCQK 89
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,664,684
Number of Sequences: 237096
Number of extensions: 663129
Number of successful extensions: 774
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1386033866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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