Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D02
         (316 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       23   0.57 
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   4.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   4.0  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   5.4  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    20   7.1  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    20   7.1  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           20   7.1  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    19   9.4  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    19   9.4  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    19   9.4  

>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 23.4 bits (48), Expect = 0.57
 Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
 Frame = -2

Query: 132 CNITEPWTLMK*SL--SSCVRSTLSIGSKRRQTTGKYFCCSCSP 7
           CN    W     SL  S C  +T   G    Q  GK F C C P
Sbjct: 130 CNCKNGWKGKTCSLKDSHCDHTTCKNGGTC-QDLGKTFMCRCPP 172


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = +2

Query: 62  IDRVDLTQLDKDYFIN 109
           +DR+  + LDKD FI+
Sbjct: 324 MDRLYFSNLDKDAFIH 339


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.6 bits (41), Expect = 4.0
 Identities = 8/20 (40%), Positives = 10/20 (50%)
 Frame = -3

Query: 68   CLSAVSGDKLQGNTSAALVH 9
            C S +    LQ N S  L+H
Sbjct: 1379 CYSTIEEKNLQVNESGKLIH 1398


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 6/14 (42%), Positives = 9/14 (64%)
 Frame = +2

Query: 215 CDAKGCHVADALCK 256
           CD+  C   DA+C+
Sbjct: 420 CDSNPCKHLDAICQ 433


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/20 (40%), Positives = 11/20 (55%)
 Frame = -2

Query: 81  VRSTLSIGSKRRQTTGKYFC 22
           V  TL I   + + +GKY C
Sbjct: 288 VAGTLIIREAKVEDSGKYLC 307


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 182 PVDLTPLSLDAENLKWF 132
           P DLTP  + A  +K F
Sbjct: 221 PTDLTPEQIQAAEVKDF 237


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 9/37 (24%), Positives = 20/37 (54%)
 Frame = -1

Query: 289 FIPRFDSYELTLAESISHMTTLRIAQDHQRKFRSELQ 179
           F P+  S     ++ +S + TLR+A ++ R  +  ++
Sbjct: 120 FAPQGPSTGRGASKKLSKVETLRLAVEYIRSLKQMIE 156



 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 272 LLRTDPCREHQPHDNPSHRTGS 207
           LL T  C E      PSH + S
Sbjct: 190 LLPTPTCSEASSSPTPSHSSES 211


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +1

Query: 52  LTADRQSGSDTTRQGLFHQCPW 117
           L A+R +G D   +  F  C W
Sbjct: 560 LDANRPTGGDALSEFNFCGCGW 581


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 284 DKLIWRLKGYY 316
           D L+W   GYY
Sbjct: 202 DMLLWHTFGYY 212


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 284 DKLIWRLKGYY 316
           D L+W   GYY
Sbjct: 202 DMLLWHTFGYY 212


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,776
Number of Sequences: 336
Number of extensions: 1329
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5836655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)