Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D02
(316 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 26 1.2
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 26 1.2
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 26 1.2
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 26 1.2
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 26 1.2
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 26 1.2
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 26 1.2
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 26 1.2
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 26 1.2
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 26 1.2
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 26 1.2
SPAC19B12.09 |srp14||signal recognition particle subunit Srp14|S... 26 1.5
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 25 2.0
SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit |Schi... 25 2.7
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 24 4.7
SPBC31F10.06c |sar1||ADP-ribosylation factor Sar1|Schizosaccharo... 24 6.3
SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces po... 24 6.3
SPAC16E8.05c |mde1||sequence orphan|Schizosaccharomyces pombe|ch... 24 6.3
SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase Mok11|S... 23 8.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 23 8.3
SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual 23 8.3
SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating |S... 23 8.3
SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regula... 23 8.3
SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr... 23 8.3
SPCC777.09c |arg1||acetylornithine aminotransferase|Schizosaccha... 23 8.3
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 23 8.3
SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr ... 23 8.3
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 23 8.3
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 26.2 bits (55), Expect = 1.2
Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = -1
Query: 310 AFESPYEFIPRF--DSYELTLAESISHMTTLRIAQDHQRKFR 191
+F P+ + + ++YEL L +SI HM + H K+R
Sbjct: 1217 SFAGPFYVLQKSGPNNYELDLPDSIKHMFSSTFHVSHLEKYR 1258
>SPAC19B12.09 |srp14||signal recognition particle subunit
Srp14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 106
Score = 25.8 bits (54), Expect = 1.5
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = +2
Query: 248 LCKGQFVGVKARDK 289
+CKGQ VG+K RD+
Sbjct: 77 VCKGQIVGLKKRDR 90
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 25.4 bits (53), Expect = 2.0
Identities = 14/49 (28%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +2
Query: 29 YFPVVCLRLLPIDRV-DLTQLDKDYFINVHGSVILQTILDFQRPAKAVS 172
Y PV C I D+ ++ KDY ++V+G++ ++++ R K S
Sbjct: 237 YEPVFCFEHCKIVHDWDIKKIQKDYSLDVYGAI---RVINYSRKTKKKS 282
>SPAPB17E12.11 |||N-oligosaccharyltransferase gamma subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 309
Score = 25.0 bits (52), Expect = 2.7
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +1
Query: 112 PWFCYIANHFRFSASSESGVRSTGAHFG 195
P F +AN ++ +SG+R T A FG
Sbjct: 73 PEFKALANSYKLKYGLDSGIRFTYADFG 100
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 24.2 bits (50), Expect = 4.7
Identities = 14/44 (31%), Positives = 18/44 (40%)
Frame = -3
Query: 272 LLRTDPCREHQPHDNPSHRTGSPAKVPK*APVDLTPLSLDAENL 141
L TDP Q P +P K+P P LT ++D L
Sbjct: 404 LSTTDPTLVPQSSSTPKSAQKTPQKLPAFLPNRLTAETVDTNKL 447
>SPBC31F10.06c |sar1||ADP-ribosylation factor
Sar1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 190
Score = 23.8 bits (49), Expect = 6.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +2
Query: 83 QLDKDYFINVHGSVILQTILDFQR 154
+L +DYF V+G V L DF+R
Sbjct: 79 RLWRDYFPEVNGIVYLVDCCDFER 102
>SPCC550.12 |arp6||actin-like protein Arp6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 401
Score = 23.8 bits (49), Expect = 6.3
Identities = 10/34 (29%), Positives = 14/34 (41%)
Frame = +2
Query: 29 YFPVVCLRLLPIDRVDLTQLDKDYFINVHGSVIL 130
Y P L+P D T +D + HG +L
Sbjct: 126 YLPCTPAELIPWDHGSFTMNQEDAYTGQHGECVL 159
>SPAC16E8.05c |mde1||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 209
Score = 23.8 bits (49), Expect = 6.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +1
Query: 106 QCPWFCYIANHFRFSASSESG 168
+ P+ + +N RFSA ESG
Sbjct: 131 ESPYLLFFSNSSRFSACEESG 151
>SPAC1527.01 |mok11|SPAC23D3.15|alpha-1,3-glucan synthase
Mok11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2397
Score = 23.4 bits (48), Expect = 8.3
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +2
Query: 65 DRVDLTQLDKDYFINVHGSVI 127
D +++ +D+ YFINV+ VI
Sbjct: 1204 DPIEVVIIDQTYFINVYKYVI 1224
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 23.4 bits (48), Expect = 8.3
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 71 VDLTQLDKDYFINVHGS 121
++L + DYFINVH S
Sbjct: 3856 INLAESVLDYFINVHNS 3872
>SPCC1450.15 |||pig-F |Schizosaccharomyces pombe|chr 3|||Manual
Length = 503
Score = 23.4 bits (48), Expect = 8.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = -3
Query: 269 LRTDPCREHQPHDNP 225
L + CR PHDNP
Sbjct: 262 LMKNHCRNSSPHDNP 276
>SPBC660.16 |||phosphogluconate dehydrogenase, decarboxylating
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 492
Score = 23.4 bits (48), Expect = 8.3
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 2/46 (4%)
Frame = +2
Query: 14 QEQQKYFPVVCLRLLPIDRVDLTQLDKDYFIN--VHGSVILQTILD 145
Q Q+ YF R+LP DKD IN HG I T D
Sbjct: 446 QAQRDYFGAHTFRVLPEAADKSLPADKDIHINWTGHGGNISATTYD 491
>SPAC6F6.17 |rif1|tap1, tap11, SPAPJ736.01|telomere length regulator
protein Rif1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1400
Score = 23.4 bits (48), Expect = 8.3
Identities = 10/25 (40%), Positives = 12/25 (48%)
Frame = -2
Query: 84 CVRSTLSIGSKRRQTTGKYFCCSCS 10
C+ S KR TG+ CC CS
Sbjct: 582 CLASAGQKEIKRSVETGRAICCICS 606
>SPBPB7E8.02 |||PSP1 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 749
Score = 23.4 bits (48), Expect = 8.3
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = -3
Query: 284 PSL*LLRTDPCREHQPHDNP 225
PSL +R P EH P+ NP
Sbjct: 433 PSLGSIRPFPISEHSPNINP 452
>SPCC777.09c |arg1||acetylornithine
aminotransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 441
Score = 23.4 bits (48), Expect = 8.3
Identities = 10/20 (50%), Positives = 11/20 (55%), Gaps = 1/20 (5%)
Frame = +1
Query: 181 GAHFGTFAGDPVRCE-GLSC 237
G H TF G+PV C G C
Sbjct: 318 GEHGSTFGGNPVACRVGTFC 337
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 23.4 bits (48), Expect = 8.3
Identities = 8/29 (27%), Positives = 16/29 (55%)
Frame = -1
Query: 295 YEFIPRFDSYELTLAESISHMTTLRIAQD 209
Y+F+P D+ ++ ES+S ++ D
Sbjct: 675 YKFLPLMDAVPISAIESVSERPEIKYPMD 703
>SPAC6G9.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 681
Score = 23.4 bits (48), Expect = 8.3
Identities = 19/88 (21%), Positives = 33/88 (37%)
Frame = +2
Query: 2 HEGEQEQQKYFPVVCLRLLPIDRVDLTQLDKDYFINVHGSVILQTILDFQRPAKAVSGXX 181
H E ++ + ++ +L+PI N+HG+ LQ I+D +S
Sbjct: 403 HASEAQRSTFIQIIAPKLVPIS------------FNMHGTRALQKIIDLVSSPDQISCIV 450
Query: 182 XXXXXXXXVILCDAKGCHVADALCKGQF 265
++ D G HV C +F
Sbjct: 451 NALRPNVVLLTKDLNGNHVIQK-CLNKF 477
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase
kinase Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 23.4 bits (48), Expect = 8.3
Identities = 8/28 (28%), Positives = 17/28 (60%)
Frame = +2
Query: 44 CLRLLPIDRVDLTQLDKDYFINVHGSVI 127
C+RL+ + + + +DYFI++ G +
Sbjct: 847 CVRLVTLATANQLSVIEDYFISIVGDTV 874
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,278,696
Number of Sequences: 5004
Number of extensions: 22521
Number of successful extensions: 80
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 79
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 80
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 83936266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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