Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_D01
(278 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q1H1M9 Cluster: Putative uncharacterized protein; n=1; ... 33 1.2
UniRef50_Q7WHY4 Cluster: Putative exported protein; n=4; Bordete... 32 2.8
UniRef50_A0CRP2 Cluster: Chromosome undetermined scaffold_25, wh... 32 2.8
UniRef50_A4RWG4 Cluster: Predicted protein; n=2; Ostreococcus|Re... 31 3.8
UniRef50_Q0U3I1 Cluster: Putative uncharacterized protein; n=1; ... 31 3.8
UniRef50_Q5LSD5 Cluster: Branched-chain amino acid ABC transport... 31 5.0
UniRef50_A3P1F4 Cluster: Putative uncharacterized protein; n=3; ... 31 5.0
UniRef50_Q8X1Y2 Cluster: Mating type 1-2 protein; n=1; Mycosphae... 31 6.6
UniRef50_Q5KMF7 Cluster: Cellular response to glucose starvation... 31 6.6
UniRef50_Q8F862 Cluster: Putative uncharacterized protein; n=2; ... 30 8.7
UniRef50_Q5BA64 Cluster: Putative uncharacterized protein; n=1; ... 30 8.7
>UniRef50_Q1H1M9 Cluster: Putative uncharacterized protein; n=1;
Methylobacillus flagellatus KT|Rep: Putative
uncharacterized protein - Methylobacillus flagellatus
(strain KT / ATCC 51484 / DSM 6875)
Length = 285
Score = 33.1 bits (72), Expect = 1.2
Identities = 15/29 (51%), Positives = 17/29 (58%)
Frame = +1
Query: 127 ILPRILSWTSGTWAVPGRARLRKLRTPWT 213
+LPR SW S +WA P R LR L P T
Sbjct: 1 MLPRSFSWPSASWAFPWRDELRVLIQPRT 29
>UniRef50_Q7WHY4 Cluster: Putative exported protein; n=4;
Bordetella|Rep: Putative exported protein - Bordetella
bronchiseptica (Alcaligenes bronchisepticus)
Length = 131
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -1
Query: 275 VGAIACRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPE 153
V AIA + RR DN D RP + G +R+RA A E
Sbjct: 24 VPAIAAKAGGRRYDNNDPRPWLAGQAGWRARANSAQANTFE 64
>UniRef50_A0CRP2 Cluster: Chromosome undetermined scaffold_25, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_25,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 172
Score = 31.9 bits (69), Expect = 2.8
Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 257 RLKNRRVDNRDVRPAVQGVRNFRSRARPGT---AQVPEVQDSILGKIRDS 117
R KN+R+D +P V+ + FR R G+ AQ +++D I K+R++
Sbjct: 2 RKKNQRIDLEFEKPQVKFIEQFRMRVNGGSNIDAQDYKIEDKIQKKVRNN 51
>UniRef50_A4RWG4 Cluster: Predicted protein; n=2; Ostreococcus|Rep:
Predicted protein - Ostreococcus lucimarinus CCE9901
Length = 1206
Score = 31.5 bits (68), Expect = 3.8
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = -1
Query: 257 RLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQVPEVQDSILGKIRDSAGR 108
R KN + RD + V + ++A+PG+A +P ++L +RDS G+
Sbjct: 827 RKKNLKRATRDFKFRVISLFQLYAKAQPGSAYLPNAVVTLLEAMRDSLGK 876
>UniRef50_Q0U3I1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 353
Score = 31.5 bits (68), Expect = 3.8
Identities = 20/41 (48%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Frame = +1
Query: 148 WTS--GTWAVPGRARLRKLRTPWTAGRTSRLSTLRFFSLQA 264
W S TW ARLRKLR PW+ T S LR S QA
Sbjct: 278 WNSVMATWQT---ARLRKLRWPWSLYLTDASSVLRLASHQA 315
>UniRef50_Q5LSD5 Cluster: Branched-chain amino acid ABC transporter,
permease protein; n=3; Rhodobacteraceae|Rep:
Branched-chain amino acid ABC transporter, permease
protein - Silicibacter pomeroyi
Length = 339
Score = 31.1 bits (67), Expect = 5.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = -2
Query: 208 RGSVISVVGPARVQPRSLRSRIVSWVRSGIVLAVRSTAYQIF 83
R S VG A + R R+++WV SG++LAV AY +
Sbjct: 200 RASADDEVGAAAMGVDIHRLRLMAWVLSGVLLAVAGIAYAYY 241
>UniRef50_A3P1F4 Cluster: Putative uncharacterized protein; n=3;
Burkholderia pseudomallei|Rep: Putative uncharacterized
protein - Burkholderia pseudomallei (strain 1106a)
Length = 746
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +1
Query: 94 RRCCVRPALSRILPRILSWTSGTWAVPGRARLRKLRTPWTAGRTSRLSTLRF 249
RR ++ + S + R + T+ WA P R + + R+ W GR SR +T RF
Sbjct: 650 RRRAIKASRSEPMRRRRATTASRWA-PARRQRARTRSRWARGR-SRTATTRF 699
>UniRef50_Q8X1Y2 Cluster: Mating type 1-2 protein; n=1;
Mycosphaerella graminicola|Rep: Mating type 1-2 protein
- Mycosphaerella graminicola (Septoria tritici)
Length = 394
Score = 30.7 bits (66), Expect = 6.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -3
Query: 102 APPIKYSHISLNPKPWHPTNVAAKIKNKI 16
AP + Y+H LNP P + T A ++N+I
Sbjct: 324 APTMTYAHAFLNPLPAYTTTAPAPVQNRI 352
>UniRef50_Q5KMF7 Cluster: Cellular response to glucose
starvation-related protein, putative; n=1;
Filobasidiella neoformans|Rep: Cellular response to
glucose starvation-related protein, putative -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 715
Score = 30.7 bits (66), Expect = 6.6
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = -1
Query: 275 VGAIACRLKNRRVDNRDVRPAVQGVRNFRSRARPGTAQ----VPEVQDSILGKIRDSAGR 108
V A A R +RR+ R V + + SRA PGTA VP++Q+S+ +S
Sbjct: 339 VKAAAARRASRRIIMRQVGDRLVPIGYTSSRA-PGTADFSMSVPQIQNSVQSGADESGSN 397
Query: 107 TQHR 96
QH+
Sbjct: 398 PQHQ 401
>UniRef50_Q8F862 Cluster: Putative uncharacterized protein; n=2;
Leptospira interrogans|Rep: Putative uncharacterized
protein - Leptospira interrogans
Length = 644
Score = 30.3 bits (65), Expect = 8.7
Identities = 23/84 (27%), Positives = 39/84 (46%), Gaps = 3/84 (3%)
Frame = -2
Query: 247 IAEWTTGMCA-RRSRGSVISVVGPARVQPRSLRSRIVSWVRSGIVLAVRSTAYQIFPYF- 74
+ EW M A + ++G++ S+V + S + S + G + V + + YF
Sbjct: 275 LGEWIIRMDALKENKGAIPSLVISGDTKTYSSELIVRSLIGLGSGIKVLQKGFVVLSYFA 334
Query: 73 -PKSETVAPYKCSRENKKQNLPEH 5
PKS+ + Y+CS E K P H
Sbjct: 335 DPKSDKILLYECSFE-KHTEEPFH 357
>UniRef50_Q5BA64 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 510
Score = 30.3 bits (65), Expect = 8.7
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 76 NMGIFDRRCCVRPALSRILPRI 141
NMG D +CCVR + SR++ R+
Sbjct: 142 NMGKLDVQCCVRASTSRVISRV 163
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 267,440,674
Number of Sequences: 1657284
Number of extensions: 4530607
Number of successful extensions: 17125
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 16726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17121
length of database: 575,637,011
effective HSP length: 70
effective length of database: 459,627,131
effective search space used: 10111796882
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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