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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D01
         (278 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450 ...    23   0.61 
AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    23   0.61 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   0.81 
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   0.81 
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   1.9  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   2.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    21   3.3  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    19   7.5  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    19   7.5  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    19   9.9  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    19   9.9  
AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase l...    19   9.9  

>EU008544-1|ABS31131.1|  493|Tribolium castaneum cytochrome P450
           protein.
          Length = 493

 Score = 23.0 bits (47), Expect = 0.61
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = -2

Query: 79  YFPKSETVAPYKCSRENKKQNLP 11
           Y+P  E   P + S ENKK   P
Sbjct: 402 YYPDPEKYDPERFSDENKKNLTP 424


>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.0 bits (47), Expect = 0.61
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = -2

Query: 79  YFPKSETVAPYKCSRENKKQNLP 11
           YFP  E   P + S ENK + +P
Sbjct: 389 YFPDPEKFDPERFSDENKAKIVP 411


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
          transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.6 bits (46), Expect = 0.81
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 25 FYFRGYICRVPRFRI*GNMGIFDRR 99
          F+F  Y+CR  R  I  ++ + +R+
Sbjct: 23 FHFNKYLCRPRRIEIAASLDLTERQ 47


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.6 bits (46), Expect = 0.81
 Identities = 8/25 (32%), Positives = 15/25 (60%)
 Frame = +1

Query: 25  FYFRGYICRVPRFRI*GNMGIFDRR 99
           F+F  Y+CR  R  I  ++ + +R+
Sbjct: 154 FHFNKYLCRPRRIEIAASLDLTERQ 178


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 1.9
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = -2

Query: 130 RSGIVLAVRSTAYQIFPYFPKSETVAP 50
           R G++    +++ Q+   F  SET AP
Sbjct: 21  RGGVISEGVASSLQVVALFQLSETTAP 47


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.0 bits (42), Expect = 2.5
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +1

Query: 73  GNMGIFDRRCCVRPALSRILPRILSWTSGTWAVPGRARLRKLRTPWTAGR 222
           GN+GI  R C   P       +    +     +PG+ R+ +L   +  GR
Sbjct: 5   GNLGIMHRHCFGYP-FQGTTYKYTGCSDNDGFLPGQGRVNQLGGVFINGR 53


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 20.6 bits (41), Expect = 3.3
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +3

Query: 222 HIPVVHSAILQSTSYC 269
           HI + H  I+Q   YC
Sbjct: 204 HITMAHFKIIQVVPYC 219


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 19.4 bits (38), Expect = 7.5
 Identities = 6/14 (42%), Positives = 11/14 (78%)
 Frame = +3

Query: 117 TIPDLTQDTILDLR 158
           ++ DL++DT  D+R
Sbjct: 119 SLDDLSEDTFYDIR 132


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 19.4 bits (38), Expect = 7.5
 Identities = 8/25 (32%), Positives = 14/25 (56%)
 Frame = +3

Query: 105 RTASTIPDLTQDTILDLRDLGCTRA 179
           R  S + +  ++  +D  +LGC RA
Sbjct: 294 RVLSELVNKMKEMKMDKTELGCLRA 318


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -1

Query: 275 VGAIACRLKNRRVDNRDV 222
           + ++AC LKN   D  D+
Sbjct: 182 IESLACELKNTVDDFNDI 199


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 8/25 (32%), Positives = 9/25 (36%)
 Frame = -3

Query: 117 CWPYAAPPIKYSHISLNPKPWHPTN 43
           CW   + P     IS  P P    N
Sbjct: 323 CWSLTSSPPPPYQISAQPTPSQSPN 347


>AF260822-1|AAG02020.1|  138|Tribolium castaneum alpha-esterase like
           protein E3 protein.
          Length = 138

 Score = 19.0 bits (37), Expect = 9.9
 Identities = 7/20 (35%), Positives = 9/20 (45%)
 Frame = -3

Query: 111 PYAAPPIKYSHISLNPKPWH 52
           PYA PP+ +        P H
Sbjct: 5   PYAKPPLGHLRFKAPELPEH 24


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,140
Number of Sequences: 336
Number of extensions: 1150
Number of successful extensions: 12
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 48
effective length of database: 106,457
effective search space used:  4684108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)

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