Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D01
         (278 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT007020-1|AAP35666.1|  132|Homo sapiens cyclin-dependent kinase...    28   6.1  
BC111965-1|AAI11966.1|  863|Homo sapiens AP2 associated kinase 1...    27   8.0  
BC104842-1|AAI04843.1|  863|Homo sapiens AP2 associated kinase 1...    27   8.0  
BC002695-1|AAH02695.1|  474|Homo sapiens AAK1 protein protein.         27   8.0  
AK128534-1|BAC87486.1|  143|Homo sapiens protein ( Homo sapiens ...    27   8.0  
AC079121-1|AAY14931.1|  769|Homo sapiens unknown protein.              27   8.0  
AB028971-1|BAA83000.2|  897|Homo sapiens KIAA1048 protein protein.     27   8.0  

>BT007020-1|AAP35666.1|  132|Homo sapiens cyclin-dependent kinase
           inhibitor 2A (melanoma, p16, inhibits CDK4) protein.
          Length = 132

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 94  RRCCVRPALSRILPRILSWTSGTWAVPG 177
           RR C  P + R+    +SW +G WA PG
Sbjct: 12  RRACGPPRV-RVFVVHISWFTGEWAAPG 38


>BC111965-1|AAI11966.1|  863|Homo sapiens AP2 associated kinase 1
           protein.
          Length = 863

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 170 TAQVPEVQDSILGKIRDSAGRTQHRLSNIPIFP*I--RNRGTLQM*PR 33
           T  +P  + SI  + R  AG+TQ     +PI P +  R R T+Q  P+
Sbjct: 354 TDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQ 401


>BC104842-1|AAI04843.1|  863|Homo sapiens AP2 associated kinase 1
           protein.
          Length = 863

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 170 TAQVPEVQDSILGKIRDSAGRTQHRLSNIPIFP*I--RNRGTLQM*PR 33
           T  +P  + SI  + R  AG+TQ     +PI P +  R R T+Q  P+
Sbjct: 354 TDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQ 401


>BC002695-1|AAH02695.1|  474|Homo sapiens AAK1 protein protein.
          Length = 474

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 170 TAQVPEVQDSILGKIRDSAGRTQHRLSNIPIFP*I--RNRGTLQM*PR 33
           T  +P  + SI  + R  AG+TQ     +PI P +  R R T+Q  P+
Sbjct: 354 TDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQ 401


>AK128534-1|BAC87486.1|  143|Homo sapiens protein ( Homo sapiens
           cDNA FLJ46692 fis, clone TRACH3012718. ).
          Length = 143

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 148 WTSGTWAVPGRARLRKLRTPW 210
           W    W +   A+ R+LRTPW
Sbjct: 55  WRPPCWPLGAAAKARRLRTPW 75


>AC079121-1|AAY14931.1|  769|Homo sapiens unknown protein.
          Length = 769

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 170 TAQVPEVQDSILGKIRDSAGRTQHRLSNIPIFP*I--RNRGTLQM*PR 33
           T  +P  + SI  + R  AG+TQ     +PI P +  R R T+Q  P+
Sbjct: 260 TDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQ 307


>AB028971-1|BAA83000.2|  897|Homo sapiens KIAA1048 protein protein.
          Length = 897

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
 Frame = -1

Query: 170 TAQVPEVQDSILGKIRDSAGRTQHRLSNIPIFP*I--RNRGTLQM*PR 33
           T  +P  + SI  + R  AG+TQ     +PI P +  R R T+Q  P+
Sbjct: 388 TDPIPTTETSIAPRQRPKAGQTQPNPGILPIQPALTPRKRATVQPPPQ 435


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 39,510,047
Number of Sequences: 237096
Number of extensions: 696002
Number of successful extensions: 1867
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1867
length of database: 76,859,062
effective HSP length: 70
effective length of database: 60,262,342
effective search space used: 1325771524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)