Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_D01
         (278 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   2.1  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   2.1  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   2.8  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   2.8  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   2.8  

>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 6/19 (31%), Positives = 14/19 (73%)
 Frame = -3

Query: 57  WHPTNVAAKIKNKIFPNIF 1
           WHP++ +A++  + + N+F
Sbjct: 573 WHPSDRSARLMLQPWANVF 591


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.4 bits (43), Expect = 2.1
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = -2

Query: 160 SLRSRIVSWVRSGIV 116
           SL SR+ SWV + ++
Sbjct: 267 SLASRVESWVNTSVI 281


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 115 ALSRILPRILSWTSGTWAVPG 177
           A  R L R+L+  +G W + G
Sbjct: 145 AQKRTLKRVLATIAGVWILSG 165


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 115 ALSRILPRILSWTSGTWAVPG 177
           A  R L R+L+  +G W + G
Sbjct: 145 AQKRTLKRVLATIAGVWILSG 165


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 2.8
 Identities = 8/21 (38%), Positives = 12/21 (57%)
 Frame = +1

Query: 115 ALSRILPRILSWTSGTWAVPG 177
           A  R L R+L+  +G W + G
Sbjct: 145 AQKRTLKRVLATIAGVWILSG 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,041
Number of Sequences: 438
Number of extensions: 1432
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5369883
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)