Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C24
         (254 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q239L9 Cluster: Putative uncharacterized protein; n=2; ...    34   0.55 
UniRef50_A0DE46 Cluster: Chromosome undetermined scaffold_47, wh...    33   1.3  
UniRef50_Q4YQ04 Cluster: Putative uncharacterized protein; n=1; ...    32   2.9  
UniRef50_A0CMC8 Cluster: Chromosome undetermined scaffold_21, wh...    32   2.9  
UniRef50_Q7YTN2 Cluster: Putative uncharacterized protein srz-10...    31   6.7  
UniRef50_Q8XJ04 Cluster: GTP binding protein; n=6; Bacteria|Rep:...    30   8.9  
UniRef50_Q8XCM8 Cluster: Putative prophage DNA injection protein...    30   8.9  

>UniRef50_Q239L9 Cluster: Putative uncharacterized protein; n=2;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 587

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 18/56 (32%), Positives = 33/56 (58%)
 Frame = -3

Query: 204 LNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVILLYIGAYI 37
           +  T+ YK  +++AVF  LS YF++  TR ++I    ++ ++ + F+    IG YI
Sbjct: 489 IETTKMYKYFVFSAVF-LLSQYFISKKTRRWLISSTMLVAYVVSFFLTFGSIGIYI 543


>UniRef50_A0DE46 Cluster: Chromosome undetermined scaffold_47, whole
            genome shotgun sequence; n=2; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_47, whole genome shotgun
            sequence - Paramecium tetraurelia
          Length = 2982

 Score = 33.1 bits (72), Expect = 1.3
 Identities = 21/57 (36%), Positives = 29/57 (50%)
 Frame = -3

Query: 240  FKIVFKLTLRILLNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNL 70
            FK   KL L + L+  Q Y  L +  +FE L T + T   RL III+      +DN+
Sbjct: 2254 FKATIKLLLLVQLDLHQSYTELNFQILFEKLLTIYDTFAPRLQIIIQGQKCTHVDNI 2310


>UniRef50_Q4YQ04 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 75

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 17/48 (35%), Positives = 26/48 (54%)
 Frame = -3

Query: 183 KVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVILLYIGAY 40
           +++L+ A ++ L  YF      LFI+IK  I +F   LF I+   G Y
Sbjct: 12  RLILFLAFYDLLIYYFTKYFGDLFILIKLKIKNFFRRLFFIISLFGEY 59


>UniRef50_A0CMC8 Cluster: Chromosome undetermined scaffold_21, whole
            genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
            undetermined scaffold_21, whole genome shotgun sequence -
            Paramecium tetraurelia
          Length = 4620

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 18/73 (24%), Positives = 36/73 (49%), Gaps = 2/73 (2%)
 Frame = -3

Query: 231  VFKLTLRILLNQTQHYKVLLYTAVFESLSTYF-LTS*TRLFIIIKDYIMH-FLDNLFVIL 58
            + + TL +   Q Q  +    + + ++L  +  L     +FI+    + H +L+N+ ++L
Sbjct: 1872 LLQFTLNLAQQQVQQNQTC--SQIIDALLPHLGLNEINHIFIVFSQDVQHIYLNNVNILL 1929

Query: 57   LYIGAYIPSHNSK 19
             YIG Y+P    K
Sbjct: 1930 KYIGMYLPYQGGK 1942


>UniRef50_Q7YTN2 Cluster: Putative uncharacterized protein srz-101;
           n=2; cellular organisms|Rep: Putative uncharacterized
           protein srz-101 - Caenorhabditis elegans
          Length = 329

 Score = 30.7 bits (66), Expect = 6.7
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = -3

Query: 192 QHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVILLYIGAYIPS 31
           Q+Y +L    V  ++  YF+ +   LFII+  YI+H L   F ++L++ A   S
Sbjct: 53  QNYFILFCFEVGLTVVDYFIATFILLFIIL-FYILHILQQTFHVILFLLAVFNS 105


>UniRef50_Q8XJ04 Cluster: GTP binding protein; n=6; Bacteria|Rep:
           GTP binding protein - Clostridium perfringens
          Length = 597

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -1

Query: 203 LIRHNIIKY-YCTQPSLNLFLHISSQVERDFSL 108
           L + N+ KY  CT+  +N+   +SSQ+ER+ S+
Sbjct: 20  LYKINVPKYSVCTEDMINIISRLSSQIEREISV 52


>UniRef50_Q8XCM8 Cluster: Putative prophage DNA injection protein;
           n=1; Escherichia coli O157:H7|Rep: Putative prophage DNA
           injection protein - Escherichia coli O157:H7
          Length = 378

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = -3

Query: 210 ILLNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFV-ILLYIGAYIP 34
           ILL        L++T V  +LS +F  S      +IK  +M    +LF+ I++Y+    P
Sbjct: 290 ILLGDASFSFYLVHTIVISTLSKFFNVSGLGAISVIKFIVMALFASLFISIMMYLFFEKP 349

Query: 33  SHNSKR 16
            +N  R
Sbjct: 350 INNKLR 355


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 203,765,880
Number of Sequences: 1657284
Number of extensions: 3149226
Number of successful extensions: 7611
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7608
length of database: 575,637,011
effective HSP length: 62
effective length of database: 472,885,403
effective search space used: 10403478866
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)