Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C24
(254 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr... 25 1.6
SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1 |Schizo... 25 2.1
SPAC1F5.08c |yam8|ehs1|calcium transport protein|Schizosaccharom... 24 2.8
SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4 |Schizosa... 24 3.7
SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4 |Schi... 23 4.9
SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit S... 23 6.4
SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4 |Schi... 23 6.4
SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|ch... 23 8.5
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 23 8.5
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 23 8.5
SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces... 23 8.5
>SPAPYUK71.03c |||C2 domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1225
Score = 25.0 bits (52), Expect = 1.6
Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Frame = -3
Query: 222 LTLRILLNQT-QHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHF 82
+ L+IL Q Q +++LYTAV L Y LFII+ I ++
Sbjct: 143 IELKILFMQHFQDSRLVLYTAVMSFLFGYLRFGFLSLFIIMAVCIQYY 190
>SPBC25B2.02c |mam1|SPBC2G5.09c|M-factor transporter Mam1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1336
Score = 24.6 bits (51), Expect = 2.1
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +1
Query: 91 NVIFNNNEKSRSTCEEICRKRFKD 162
N+I N S S EE+CR D
Sbjct: 529 NIIMRNENASESDFEEVCRLALVD 552
>SPAC1F5.08c |yam8|ehs1|calcium transport
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 486
Score = 24.2 bits (50), Expect = 2.8
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 168 TAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFV 64
TA L+T F+T + L+I + F N FV
Sbjct: 97 TASENGLATIFVTGYSPLYIAVSSAFSQFAPNFFV 131
>SPAC167.01 |ppk4||serine/threonine protein kinase Ppk4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 23.8 bits (49), Expect = 3.7
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = -1
Query: 191 NIIKYYCTQPSLNLFLHI 138
NI++YYC Q S + FL+I
Sbjct: 707 NIVRYYCKQKS-DQFLYI 723
>SPCP1E11.06 |apl4||AP-1 adaptor complex gamma subunit Apl4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 865
Score = 23.4 bits (48), Expect = 4.9
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = +2
Query: 44 API*SNITNKLSKKCIM*SLIIMKSRVQLVRKYVER 151
A + SN N +SKK ++ +L +++ L Y+E+
Sbjct: 171 AELCSNHHNYISKKAVLCALRVIQKEPDLESLYIEK 206
>SPBC8D2.07c |sfc9||transcription factor TFIIIC complex subunit Sfc9
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 673
Score = 23.0 bits (47), Expect = 6.4
Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = -3
Query: 207 LLNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYI-MHFLDNLFV 64
L+N T K ++T + SLS++ +T F+ +K I + L NL++
Sbjct: 448 LMNDTLKEKTDIFTMLTNSLSSFLVTD-YDFFLELKHLIDISSLSNLYL 495
>SPCC1393.10 |ctr4||copper transporter complex subunit Ctr4
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 23.0 bits (47), Expect = 6.4
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = -3
Query: 90 MHFLDNLFVILLYIGAYI 37
+HFL + F ++ YI AYI
Sbjct: 204 LHFLRSCFYLVQYIVAYI 221
>SPAC11D3.05 |||membrane transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 546
Score = 22.6 bits (46), Expect = 8.5
Identities = 8/22 (36%), Positives = 15/22 (68%)
Frame = -2
Query: 100 RLHYAFLG*FIRNITLYWCLYT 35
RL+ F+G F+ I+++W +T
Sbjct: 415 RLYPLFIGCFLLPISMFWFAWT 436
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 22.6 bits (46), Expect = 8.5
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -3
Query: 240 FKIVFKLTLRILLNQTQHYKVLLYTAVFESLSTYFL 133
+KI +L +R+L + T+ +L V++ L + L
Sbjct: 2195 YKITCELVMRVLRSNTESLMAVLEAFVYDPLINWRL 2230
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 22.6 bits (46), Expect = 8.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 249 IDNFKIVFKLTLRILLNQTQHYKVLLY 169
+ +FK+ K TL L N KVL Y
Sbjct: 634 LKDFKVYLKTTLNRLYNSKLTRKVLYY 660
>SPAC1834.09 |mug51||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 306
Score = 22.6 bits (46), Expect = 8.5
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = -1
Query: 206 YLIRHNIIKYYCTQPSLNLFLHISSQVERDFSLLLK 99
+LI Y + P+L +F HI D S LK
Sbjct: 205 FLILAGTDSYGISLPNLGIFTHILRNSRNDLSNYLK 240
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 918,626
Number of Sequences: 5004
Number of extensions: 15438
Number of successful extensions: 41
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 40
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 41
length of database: 2,362,478
effective HSP length: 60
effective length of database: 2,062,238
effective search space used: 49493712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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