Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C24
(254 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical pr... 31 0.15
U27312-4|AAA68248.1| 405|Caenorhabditis elegans Hypothetical pr... 27 1.4
Z79694-4|CAB01963.1| 398|Caenorhabditis elegans Hypothetical pr... 26 4.3
Z79694-7|CAB01964.1| 396|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical pr... 25 5.6
AF016444-13|AAB65926.1| 330|Caenorhabditis elegans Serpentine r... 25 5.6
AC199166-1|ABO33245.1| 343|Caenorhabditis elegans F-box a prote... 25 5.6
Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical pr... 25 7.4
U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical p... 25 9.8
U27312-3|AAA68247.1| 149|Caenorhabditis elegans Hypothetical pr... 25 9.8
AL110479-1|CAB60310.2| 311|Caenorhabditis elegans Hypothetical ... 25 9.8
>Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical
protein F14F8.12 protein.
Length = 329
Score = 30.7 bits (66), Expect = 0.15
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = -3
Query: 192 QHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVILLYIGAYIPS 31
Q+Y +L V ++ YF+ + LFII+ YI+H L F ++L++ A S
Sbjct: 53 QNYFILFCFEVGLTVVDYFIATFILLFIIL-FYILHILQQTFHVILFLLAVFNS 105
>U27312-4|AAA68248.1| 405|Caenorhabditis elegans Hypothetical
protein F26A1.8 protein.
Length = 405
Score = 27.5 bits (58), Expect = 1.4
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = -1
Query: 164 PSLNLFLHISSQVERDFSLLLK 99
P + L LHI ++ RDFSL+++
Sbjct: 125 PVMTLALHIKPEIARDFSLMIQ 146
>Z79694-4|CAB01963.1| 398|Caenorhabditis elegans Hypothetical
protein C15A11.4 protein.
Length = 398
Score = 25.8 bits (54), Expect = 4.3
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 164 PSLNLFLHISSQVERDFSLL 105
P + L LH++ + RDFSL+
Sbjct: 121 PVMTLILHLAPSIARDFSLM 140
>Z79694-7|CAB01964.1| 396|Caenorhabditis elegans Hypothetical
protein C15A11.7 protein.
Length = 396
Score = 25.4 bits (53), Expect = 5.6
Identities = 8/22 (36%), Positives = 16/22 (72%)
Frame = -1
Query: 164 PSLNLFLHISSQVERDFSLLLK 99
P + L LH++ + RDF+L+++
Sbjct: 111 PVMTLVLHLAPSIARDFALMIQ 132
>Z78415-3|CAB01674.1| 530|Caenorhabditis elegans Hypothetical
protein C17G1.3a protein.
Length = 530
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/27 (37%), Positives = 19/27 (70%)
Frame = -3
Query: 237 KIVFKLTLRILLNQTQHYKVLLYTAVF 157
+++ L L+IL N + YK+L+Y+ +F
Sbjct: 2 QLLSALLLQILFNVSSPYKILVYSNLF 28
>Z75553-6|CAA99951.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 207 LLNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVI 61
LLN Q+Y V + A+F LS ++++IK + FL LF I
Sbjct: 485 LLNTFQYYSVDIVLAIFVILSVILFV----VYLVIK-LLFRFLGRLFSI 528
>Z75529-9|CAA99789.1| 534|Caenorhabditis elegans Hypothetical
protein ZC443.6 protein.
Length = 534
Score = 25.4 bits (53), Expect = 5.6
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = -3
Query: 207 LLNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVI 61
LLN Q+Y V + A+F LS ++++IK + FL LF I
Sbjct: 485 LLNTFQYYSVDIVLAIFVILSVILFV----VYLVIK-LLFRFLGRLFSI 528
>AF016444-13|AAB65926.1| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 8 protein.
Length = 330
Score = 25.4 bits (53), Expect = 5.6
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
Frame = -3
Query: 243 NFKIVFKLTLRILLNQ---TQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDN 73
N K+ KL + L N+ Q+ K + VF +L + FLT +FIII +
Sbjct: 213 NEKLRAKLLMSTLSNRYSLEQNLKSMRTLKVFANLQSIFLTLQMTIFIIIFYLGLAIEKT 272
Query: 72 LFVILLYIGAYIP 34
++ L+ + A P
Sbjct: 273 TYIALIELNAGYP 285
>AC199166-1|ABO33245.1| 343|Caenorhabditis elegans F-box a protein
protein 6 protein.
Length = 343
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = -3
Query: 246 DNFKIVFKLTLRILLNQTQHYKVLLYTAVFESLSTYFL 133
DNF + LRILL + + ++ ++ T +++TYFL
Sbjct: 125 DNFMQLAFNDLRILLGRVRKFEFVVQTQQDLNVTTYFL 162
>Z50859-2|CAA90727.2| 524|Caenorhabditis elegans Hypothetical
protein T26C5.2 protein.
Length = 524
Score = 25.0 bits (52), Expect = 7.4
Identities = 8/25 (32%), Positives = 17/25 (68%)
Frame = +1
Query: 79 QEMHNVIFNNNEKSRSTCEEICRKR 153
+E NV ++N ++ CE+IC+++
Sbjct: 322 EESENVDIDSNVPNKRECEKICKEK 346
>U29096-4|AAA68408.1| 1599|Caenorhabditis elegans Hypothetical
protein F30H5.3 protein.
Length = 1599
Score = 25.0 bits (52), Expect = 7.4
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = +1
Query: 106 NNEKSRSTCEEICRKRFKDGCVQ 174
NN K+R CE CR K G Q
Sbjct: 379 NNFKTREHCESYCRDTCKRGSPQ 401
>Z72502-12|CAI46558.2| 303|Caenorhabditis elegans Hypothetical
protein C08B6.13 protein.
Length = 303
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/66 (19%), Positives = 31/66 (46%)
Frame = -3
Query: 234 IVFKLTLRILLNQTQHYKVLLYTAVFESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVILL 55
I + + ++LN QH+ V + S +FL S LF+ ++ + ++ + + L+
Sbjct: 39 ITHMIWVELVLNFCQHFSVEYVLEAEDESSLHFLESVCVLFMTLQMWTVNTIRYIMTFLM 98
Query: 54 YIGAYI 37
++
Sbjct: 99 AANRFV 104
>U27312-3|AAA68247.1| 149|Caenorhabditis elegans Hypothetical
protein F26A1.7 protein.
Length = 149
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 164 PSLNLFLHISSQVERDFSLLL 102
P + L LHI + RDF+L++
Sbjct: 112 PVMTLGLHIDPDIARDFALMM 132
>AL110479-1|CAB60310.2| 311|Caenorhabditis elegans Hypothetical
protein Y105C5B.1 protein.
Length = 311
Score = 24.6 bits (51), Expect = 9.8
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = -3
Query: 156 ESLSTYFLTS*TRLFIIIKDYIMHFLDNLFVILLYI 49
++L+T+FL + + +II H +N+F ILL+I
Sbjct: 20 DTLNTFFLNALELILLII-----HVSNNIFFILLFI 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,981,004
Number of Sequences: 27780
Number of extensions: 83587
Number of successful extensions: 254
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 252
length of database: 12,740,198
effective HSP length: 63
effective length of database: 10,990,058
effective search space used: 230791218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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