Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C23
(282 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY051520-1|AAK92944.1| 536|Drosophila melanogaster GH17801p pro... 63 6e-11
AE014134-281|AAF51348.3| 536|Drosophila melanogaster CG17660-PA... 63 6e-11
AF160906-1|AAD46846.1| 505|Drosophila melanogaster BcDNA.LD0279... 29 0.88
AE013599-2704|AAF57684.1| 505|Drosophila melanogaster CG5519-PA... 29 0.88
U10506-1|AAA19240.1| 415|Drosophila melanogaster sex combs redu... 28 1.5
BT001276-1|AAN71032.1| 477|Drosophila melanogaster AT06856p pro... 27 3.6
AY122063-1|AAM52575.1| 672|Drosophila melanogaster AT04695p pro... 27 3.6
AE014134-2383|AAN10841.2| 477|Drosophila melanogaster CG7311-PB... 27 3.6
AE014134-2382|AAF53322.2| 672|Drosophila melanogaster CG7311-PA... 27 3.6
AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p pro... 27 4.7
X77075-1|CAA54348.1| 417|Drosophila melanogaster protein ( D.me... 26 6.2
BT022124-1|AAY51519.1| 882|Drosophila melanogaster IP09048p pro... 26 6.2
AE014297-522|AAS65104.1| 417|Drosophila melanogaster CG1030-PC,... 26 6.2
AE014297-521|AAS65103.1| 417|Drosophila melanogaster CG1030-PB,... 26 6.2
AE014297-520|AAF54082.1| 417|Drosophila melanogaster CG1030-PA,... 26 6.2
AE001572-5|AAD19795.1| 417|Drosophila melanogaster homeodomain ... 26 6.2
L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike n... 26 8.2
AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p pro... 26 8.2
AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA... 26 8.2
>AY051520-1|AAK92944.1| 536|Drosophila melanogaster GH17801p
protein.
Length = 536
Score = 62.9 bits (146), Expect = 6e-11
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 33 MFAEWISVCKRALSRMLVIIVSLGFGIVKPRLGPALQRXXXXXXXXXXXXAIDAWLRLRH 212
+ AE++S KR L+RMLVII+SLGFGIVKPRLGP L R ++++LR+ +
Sbjct: 270 LVAEFVSCAKRTLARMLVIIMSLGFGIVKPRLGPMLHRVVGVGTLYFVLACVESYLRITN 329
Query: 213 -KADES 227
K D S
Sbjct: 330 VKTDRS 335
>AE014134-281|AAF51348.3| 536|Drosophila melanogaster CG17660-PA
protein.
Length = 536
Score = 62.9 bits (146), Expect = 6e-11
Identities = 32/66 (48%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Frame = +3
Query: 33 MFAEWISVCKRALSRMLVIIVSLGFGIVKPRLGPALQRXXXXXXXXXXXXAIDAWLRLRH 212
+ AE++S KR L+RMLVII+SLGFGIVKPRLGP L R ++++LR+ +
Sbjct: 270 LVAEFVSCAKRTLARMLVIIMSLGFGIVKPRLGPMLHRVVGVGTLYFVLACVESYLRITN 329
Query: 213 -KADES 227
K D S
Sbjct: 330 VKTDRS 335
>AF160906-1|AAD46846.1| 505|Drosophila melanogaster BcDNA.LD02793
protein.
Length = 505
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 145 RCSAGPRRGLTIPKPSDTMMTSIRDKALLHTDIHSANIYTSAL 17
RC GP GL++ D ++++ DK +DI + + T +
Sbjct: 304 RCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVI 346
>AE013599-2704|AAF57684.1| 505|Drosophila melanogaster CG5519-PA
protein.
Length = 505
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/43 (27%), Positives = 22/43 (51%)
Frame = -3
Query: 145 RCSAGPRRGLTIPKPSDTMMTSIRDKALLHTDIHSANIYTSAL 17
RC GP GL++ D ++++ DK +DI + + T +
Sbjct: 304 RCHEGPVTGLSLHPTGDYLLSTSSDKHWAFSDIRTGRLLTKVI 346
>U10506-1|AAA19240.1| 415|Drosophila melanogaster sex combs reduced
homeodomainprotein protein.
Length = 415
Score = 28.3 bits (60), Expect = 1.5
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = -2
Query: 266 QRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHA 144
Q+++ +QQQ+A+ + AQ Q ++ +HP Q + A
Sbjct: 121 QQQQQQQQQQLALAAAAVRAQQQQQLAQQQHPQQQQQQQQA 161
>BT001276-1|AAN71032.1| 477|Drosophila melanogaster AT06856p
protein.
Length = 477
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 269 QQRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHALQRGAQTR 120
+Q+E+ + Q+ VR +GL + QPR S P + ++ R A R
Sbjct: 387 EQKEQMVAAQEFLVRQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRR 436
>AY122063-1|AAM52575.1| 672|Drosophila melanogaster AT04695p
protein.
Length = 672
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 269 QQRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHALQRGAQTR 120
+Q+E+ + Q+ VR +GL + QPR S P + ++ R A R
Sbjct: 582 EQKEQMVAAQEFLVRQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRR 631
>AE014134-2383|AAN10841.2| 477|Drosophila melanogaster CG7311-PB,
isoform B protein.
Length = 477
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 269 QQRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHALQRGAQTR 120
+Q+E+ + Q+ VR +GL + QPR S P + ++ R A R
Sbjct: 387 EQKEQMVAAQEFLVRQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRR 436
>AE014134-2382|AAF53322.2| 672|Drosophila melanogaster CG7311-PA,
isoform A protein.
Length = 672
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -2
Query: 269 QQRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHALQRGAQTR 120
+Q+E+ + Q+ VR +GL + QPR S P + ++ R A R
Sbjct: 582 EQKEQMVAAQEFLVRQMGLGSIVQPRSTSKSKPKKKGSSEGCCCRAAVRR 631
>AY084183-1|AAL89921.1| 315|Drosophila melanogaster RE62247p
protein.
Length = 315
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 176 HPPQHARADHALQRGAQ 126
HPP H R H LQR Q
Sbjct: 197 HPPHHPRQQHRLQRRQQ 213
>X77075-1|CAA54348.1| 417|Drosophila melanogaster protein (
D.melanogaster SCR gene exon1. ).
Length = 417
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 266 QRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHA 144
Q+++ +QQQ A + AQ Q ++ +HP Q + A
Sbjct: 123 QQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQA 163
>BT022124-1|AAY51519.1| 882|Drosophila melanogaster IP09048p
protein.
Length = 882
Score = 26.2 bits (55), Expect = 6.2
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = -2
Query: 263 RERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHALQR 135
R+R+ QQ+ V++ V Q Q + + + QH +A QR
Sbjct: 140 RQREQEQQENMVKIKQHVRQQQQQQHQQQQQQQHHQAQQQQQR 182
>AE014297-522|AAS65104.1| 417|Drosophila melanogaster CG1030-PC,
isoform C protein.
Length = 417
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 266 QRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHA 144
Q+++ +QQQ A + AQ Q ++ +HP Q + A
Sbjct: 123 QQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQA 163
>AE014297-521|AAS65103.1| 417|Drosophila melanogaster CG1030-PB,
isoform B protein.
Length = 417
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 266 QRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHA 144
Q+++ +QQQ A + AQ Q ++ +HP Q + A
Sbjct: 123 QQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQA 163
>AE014297-520|AAF54082.1| 417|Drosophila melanogaster CG1030-PA,
isoform A protein.
Length = 417
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 266 QRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHA 144
Q+++ +QQQ A + AQ Q ++ +HP Q + A
Sbjct: 123 QQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQA 163
>AE001572-5|AAD19795.1| 417|Drosophila melanogaster homeodomain
protein protein.
Length = 417
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/41 (29%), Positives = 21/41 (51%)
Frame = -2
Query: 266 QRERDLRQQQVAVRLVGLVAQTQPRVYSAEHPPQHARADHA 144
Q+++ +QQQ A + AQ Q ++ +HP Q + A
Sbjct: 123 QQQQQQQQQQHAHAAAAVAAQQQQQLAQQQHPQQQQQQQQA 163
>L35153-1|AAA64457.1| 857|Drosophila melanogaster polycomblike
nuclear protein protein.
Length = 857
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 212 VAQTQPRVYSAEHPPQHARADHA 144
+ T P VYS PPQ A + +A
Sbjct: 119 IISTAPSVYSLNKPPQEAHSTYA 141
>AY075585-1|AAL68389.1| 1043|Drosophila melanogaster SD09488p
protein.
Length = 1043
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 212 VAQTQPRVYSAEHPPQHARADHA 144
+ T P VYS PPQ A + +A
Sbjct: 119 IISTAPSVYSLNKPPQEAHSTYA 141
>AE013599-2620|AAF57748.2| 1043|Drosophila melanogaster CG5109-PA
protein.
Length = 1043
Score = 25.8 bits (54), Expect = 8.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -2
Query: 212 VAQTQPRVYSAEHPPQHARADHA 144
+ T P VYS PPQ A + +A
Sbjct: 119 IISTAPSVYSLNKPPQEAHSTYA 141
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,247,298
Number of Sequences: 53049
Number of extensions: 158684
Number of successful extensions: 733
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 703
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 727
length of database: 24,988,368
effective HSP length: 72
effective length of database: 21,168,840
effective search space used: 444545640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -