Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C23
         (282 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   1.2  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    21   3.8  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    20   5.0  
AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor typ...    20   6.7  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              19   8.8  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 1.2
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -2

Query: 269 QQRERDLRQQQVAVRLVGLVAQTQ 198
           QQ+++ L QQQ   ++VG   Q Q
Sbjct: 237 QQQQQPLTQQQYQQQIVGKYLQQQ 260


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
            protein.
          Length = 1143

 Score = 20.6 bits (41), Expect = 3.8
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -3

Query: 106  KPSDTMMTSIRDKALLHTDIHSANIYTS 23
            K  +  M S+RD+   H DI    + T+
Sbjct: 1098 KQVEAYMLSLRDENRYHEDIFGITLRTA 1125


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 20.2 bits (40), Expect = 5.0
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +3

Query: 60  KRALSRMLVIIVSL 101
           +R L+RML ++VSL
Sbjct: 17  QRPLARMLALLVSL 30


>AF498306-5|AAM19330.1|  456|Apis mellifera dopamine receptor type
           D2 protein.
          Length = 456

 Score = 19.8 bits (39), Expect = 6.7
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = -2

Query: 188 YSAEHPPQHARADHALQRGAQTR 120
           YSA +PPQ+   +  L   A  R
Sbjct: 23  YSASYPPQNRSQEEDLWNLATDR 45


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 19.4 bits (38), Expect = 8.8
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +1

Query: 1    ARGVISMLKCICLPNG 48
            A GVI+  K I +P+G
Sbjct: 1110 ANGVITGYKVIVIPSG 1125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 64,420
Number of Sequences: 438
Number of extensions: 994
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5494764
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)