Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= S06A01NCLL0022_C21
         (331 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding prote...    23   1.3  
AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.          22   1.7  
AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.          22   1.7  
AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex det...    22   1.7  
AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding prote...    22   2.2  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   2.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   5.1  
AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    20   6.7  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    20   8.9  
DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex det...    20   8.9  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                20   8.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             20   8.9  

>AF393492-1|AAL60417.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 22.6 bits (46), Expect = 1.3
 Identities = 9/19 (47%), Positives = 14/19 (73%)
 Frame = +2

Query: 227 YDAEKEFEEMRKKGLFQSC 283
           Y+A  E E+M+K G F++C
Sbjct: 41  YEANSE-EQMKKFGCFEAC 58


>AY569719-1|AAS86672.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569718-1|AAS86671.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569715-1|AAS86668.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569714-1|AAS86667.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569711-1|AAS86664.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY569702-1|AAS86655.1|  400|Apis mellifera feminizer protein.
          Length = 400

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AY350616-1|AAQ57658.1|  401|Apis mellifera complementary sex
           determiner protein.
          Length = 401

 Score = 22.2 bits (45), Expect = 1.7
 Identities = 9/29 (31%), Positives = 17/29 (58%)
 Frame = +2

Query: 191 ERKRKYAEFYRNYDAEKEFEEMRKKGLFQ 277
           ER R+  E+    + E+E E ++KK + +
Sbjct: 34  ERLRRRREWMIQQEREREHERLKKKMILE 62


>AF393495-1|AAL60420.1|  136|Apis mellifera odorant binding protein
           ASP4 protein.
          Length = 136

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = +2

Query: 227 YDAEKEFEEMRKKGLFQSC 283
           Y++  E E+M+K G F++C
Sbjct: 41  YESNSE-EQMKKLGCFEAC 58


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 21.8 bits (44), Expect = 2.2
 Identities = 8/22 (36%), Positives = 15/22 (68%)
 Frame = +1

Query: 262 EGTVPVMLNIDICSVV*LLLLF 327
           +GT  ++L   +C V+ ++LLF
Sbjct: 216 QGTGTIILKKTVCFVIPIMLLF 237


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.6 bits (41), Expect = 5.1
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 106 DCCDQEEPYCITCPCWNHR 162
           D CD E      C C+N R
Sbjct: 753 DACDCEMTCPAGCKCYNDR 771


>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 20.2 bits (40), Expect = 6.7
 Identities = 9/30 (30%), Positives = 18/30 (60%)
 Frame = +2

Query: 59  DKAVSTIAKPQMRGLLTAVIKKNLIVSLVL 148
           DK+  ++A  Q  G +  + K+NL V+ ++
Sbjct: 104 DKSEISLATKQACGFIDNIDKRNLSVTSMI 133


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -1

Query: 331 SKIIIIVILHYKCQCLA*LEQSL 263
           S ++I++I+  KC+ ++   QSL
Sbjct: 18  SFVVILLIIPSKCEAVSNDRQSL 40


>DQ325107-1|ABD14121.1|  176|Apis mellifera complementary sex
           determiner protein.
          Length = 176

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = -3

Query: 326 NNNNSHTTLQMSMFSMTGTVPSYASLRIP 240
           NNNN++  LQ    +    +P    + +P
Sbjct: 92  NNNNNYKKLQYYNINYIEQIPVPVPIPVP 120


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -1

Query: 259 THLFEFLLGVIVPVELC 209
           T+L+EFLL ++   E C
Sbjct: 458 TYLWEFLLKLLQDREYC 474


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 19.8 bits (39), Expect = 8.9
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -2

Query: 54  AIFNKIFHEKPQMAQP 7
           +IFN  +  KP+M+ P
Sbjct: 547 SIFNSGYRPKPRMSGP 562



 Score = 19.8 bits (39), Expect = 8.9
 Identities = 6/12 (50%), Positives = 12/12 (100%)
 Frame = -1

Query: 133  NKVLLDHSSQQS 98
            +K+++DHSSQ++
Sbjct: 1489 SKLIVDHSSQKT 1500


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,168
Number of Sequences: 438
Number of extensions: 2223
Number of successful extensions: 18
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7342137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)