Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C19
(392 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 31 0.064
SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr... 30 0.11
SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyce... 29 0.26
SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces pomb... 29 0.34
SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces... 28 0.45
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 1.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 27 1.0
SPBC530.15c ||SPBC661.01|spermidine family transporter |Schizosa... 27 1.4
SPAC2E12.02 |hsf1|hstf, hsf|transcription factor Hsf1|Schizosacc... 26 1.8
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 26 2.4
SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces pom... 25 4.2
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 25 5.5
SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 25 5.5
SPAC16A10.08c |mug74|SPAC589.01c|sequence orphan|Schizosaccharom... 25 5.5
SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr 1|... 25 5.5
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 24 7.3
SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit L37|... 24 7.3
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 24 7.3
SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomy... 24 7.3
SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces ... 24 7.3
SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase ... 24 9.7
SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual 24 9.7
SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyce... 24 9.7
SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity prote... 24 9.7
SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase |Schizosacc... 24 9.7
SPCC794.08 |||HEAT repeat protein, unknown biological role|Schiz... 24 9.7
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 31.1 bits (67), Expect = 0.064
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 13 SXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLA 159
S Q + Q+L+R + + +K H E Q L +LQT I N+ S L+
Sbjct: 508 STQSSLQSLQRDILNEKKKHEVYESQLNELKGELQTEISNSEHLSSQLS 556
>SPCC364.04c |||CASP family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 30.3 bits (65), Expect = 0.11
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Frame = +1
Query: 22 QARQNLERTVEDLRK---AHPD-VEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHT 189
Q ++ LER VE+LRK + D VE +A + + + E Q L K++ T
Sbjct: 138 QGKEKLEREVENLRKELDKYKDLVETEAEKRAAITKEECEKSWLEQQKLYKDMEQENAST 197
Query: 190 SQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 279
QKL K++ + H ++Q +E+A
Sbjct: 198 IQKLTSKIRELQASQLDH--DLQASQNESA 225
>SPAC3H5.08c |||WD repeat protein Wdr44 family|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 855
Score = 29.1 bits (62), Expect = 0.26
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 72 PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKTESGIR 227
P R ++ ++RE NR T+ G + HGS LT+TG + ++
Sbjct: 15 PSRASSNTHLSREGTNRSSNVTRTV----SGRKSNHGSSLTDTGESDQLSLK 62
>SPBC29A10.13 |atp7||F0-ATPase subunit D|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 175
Score = 28.7 bits (61), Expect = 0.34
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEK 87
+QAR E T+ED+++A P++EK
Sbjct: 127 EQARPTEEITIEDMKQAVPEIEK 149
>SPAPB21F2.03 |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 172
Score = 28.3 bits (60), Expect = 0.45
Identities = 12/50 (24%), Positives = 28/50 (56%)
Frame = +1
Query: 1 ARGGSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQ 150
AR ++AR+NL+ V + + P+++ + + +L+ I+++L Q
Sbjct: 79 ARKRRNRKARENLKVNVSSIGEVLPEIDLDISVANSRLKPVIKDSLSSKQ 128
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.1 bits (57), Expect = 1.0
Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 6/55 (10%)
Frame = +1
Query: 28 RQNLERTVEDLRKAHPDVEKQ------ATALHEKLQTAIQNTLKESQNLAKEVGV 174
+Q L EDLRK D EK+ A + +KL+ L++ ++L KE+ +
Sbjct: 1045 KQQLLLVTEDLRKTREDYEKELLRHADARSTLQKLREDYTKALEQVEDLNKEIAL 1099
Score = 23.8 bits (49), Expect = 9.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = +1
Query: 43 RTVEDLRKAHPDVEKQATALHEKLQ 117
R V+DL K + +Q T L+EK+Q
Sbjct: 224 RQVQDLEKKLAGLAQQNTELNEKIQ 248
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 27.1 bits (57), Expect = 1.0
Identities = 25/101 (24%), Positives = 48/101 (47%), Gaps = 2/101 (1%)
Frame = +1
Query: 1 ARGGSXQQARQNLERTVEDLRKAHP--DVEKQATALHEKLQTAIQNTLKESQNLAKEVGV 174
A+GG A ++LE D +A VEKQ +++E+L+ + + +E
Sbjct: 637 AKGGLEVNA-EDLEHLDADKLRAMQIEQVEKQNKSMNERLRVIGKRIDHLERAYRREAIP 695
Query: 175 NMDHTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RA 297
+ +++ A + + + K +EVQ++ HE A K +A
Sbjct: 696 LWEEDAKQQAEHDREIFYEREKQRKEVQERKHEQAIKDKKA 736
>SPBC530.15c ||SPBC661.01|spermidine family transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 1.4
Identities = 14/37 (37%), Positives = 24/37 (64%), Gaps = 1/37 (2%)
Frame = +1
Query: 40 ERTVEDLRK-AHPDVEKQATALHEKLQTAIQNTLKES 147
ERT E + A D+EKQ + H++ Q+++ + L+ES
Sbjct: 3 ERTSESSSESASFDLEKQQSNHHDRYQSSVSSELEES 39
>SPAC2E12.02 |hsf1|hstf, hsf|transcription factor
Hsf1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 609
Score = 26.2 bits (55), Expect = 1.8
Identities = 14/21 (66%), Positives = 14/21 (66%), Gaps = 2/21 (9%)
Frame = +3
Query: 12 KXPTSSP--ELGAHSRGSPQG 68
K PT SP E AHSR SPQG
Sbjct: 253 KYPTVSPTNEPSAHSRPSPQG 273
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 25.8 bits (54), Expect = 2.4
Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 161
+ P+ P G H+R + + ET H ++ P +HT+ E P +
Sbjct: 677 KESIPSKQPTEGQHARQESLPSQQTTETKHLRKESTPSKQPTEGQHTRQESLPSQ 731
Score = 23.8 bits (49), Expect = 9.7
Identities = 12/55 (21%), Positives = 22/55 (40%), Gaps = 3/55 (5%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHP---EHTKGEPEPGE 161
+ P+ P G H+R + + ET H ++ P +H + E P +
Sbjct: 709 KESTPSKQPTEGQHTRQESLPSQQTTETKHLRKESIPSKQPTEGQHARQESLPSQ 763
>SPAC3G9.05 |||GTPase activating protein |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 659
Score = 25.0 bits (52), Expect = 4.2
Identities = 11/29 (37%), Positives = 14/29 (48%)
Frame = +2
Query: 38 WSAQSRISARRTPTSRNKPPHYTRSCKPP 124
+ QSR S S N PP+ TR+ P
Sbjct: 103 FEVQSRYSGALKEVSSNTPPNMTRAASQP 131
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/30 (33%), Positives = 14/30 (46%)
Frame = +3
Query: 126 PEHTKGEPEPGEGSRRQHGSHLTETGAKTE 215
P H + E E RR+ SH +E+ E
Sbjct: 789 PSHYEEEEEEEPEERREESSHFSESSGNNE 818
>SPBC16E9.16c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 642
Score = 24.6 bits (51), Expect = 5.5
Identities = 23/89 (25%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Frame = +1
Query: 40 ERTVEDLRKAHPDVEKQATALHEKLQTAIQ-NTLKESQNLAKEVGVNMDHTSQKLA-PKL 213
E+T++DL + ++A E+LQ A Q N S+ L E +LA +
Sbjct: 102 EKTLQDLLEQRQVALREAREAEEELQRARQYNDRSTSEALELEARAKKAAQDAELASERA 161
Query: 214 KAAYDDFVKHAEEVQKKVHEAATKQ*RAL 300
+ A + A +K+ E A + AL
Sbjct: 162 REAQSSIERSASLREKQAREEAERAATAL 190
>SPAC16A10.08c |mug74|SPAC589.01c|sequence
orphan|Schizosaccharomyces pombe|chr 1|||Manual
Length = 285
Score = 24.6 bits (51), Expect = 5.5
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Frame = +1
Query: 82 EKQATALHEKLQTAIQNTLKE--SQ-NLAKEVGVNMDHTSQKLAPKLKAAYD 228
EKQ HEK+ ++ LKE SQ N AK++ ++ +Q + K+ ++
Sbjct: 234 EKQRNTEHEKIIRRMKKELKELHSQFNFAKKLFISALSANQDILDKMNDEFN 285
>SPAC2F7.16c |||phospholipase D |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1369
Score = 24.6 bits (51), Expect = 5.5
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = +3
Query: 99 ITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETG 203
I+ E+ ++ + T G+P R++HG+ T G
Sbjct: 315 ISWESHSQDGDRTTGQPRHANNGRKKHGNFWTIQG 349
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 24.2 bits (50), Expect = 7.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +1
Query: 58 LRKAHPDVEKQATALHEKLQTAIQNTLKE 144
L AH D+E + T++ E+L++ I +E
Sbjct: 267 LDSAHSDLELELTSIRERLESLILEKQEE 295
>SPCC645.09 |mrpl37||mitochondrial ribosomal protein subunit
L37|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 24.2 bits (50), Expect = 7.3
Identities = 12/48 (25%), Positives = 24/48 (50%)
Frame = +1
Query: 136 LKESQNLAKEVGVNMDHTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 279
L+ S+N + + V + S +++PK D A++V K H ++
Sbjct: 30 LRSSRNSSSSL-VKRSYVSSRVSPKKPQHNSDATSSAQKVANKTHTSS 76
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 24.2 bits (50), Expect = 7.3
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +1
Query: 37 LERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 156
LE+T+EDL+ A D K L + + + + T K + +
Sbjct: 926 LEKTIEDLKLALQDELKNRNLLMDDISSYNKQTTKLQEKI 965
>SPBC16E9.11c |pub3||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 786
Score = 24.2 bits (50), Expect = 7.3
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = +1
Query: 73 PDVEKQATALHEKLQTAIQNTL 138
PD + T LHEKL A++NT+
Sbjct: 761 PDYPSKDT-LHEKLSLAVENTV 781
>SPAC1F5.11c |||phosphatidylinositol kinase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 3655
Score = 24.2 bits (50), Expect = 7.3
Identities = 12/32 (37%), Positives = 16/32 (50%)
Frame = -1
Query: 107 SCNAVACFSTSGCALRRSSTVRSKFWRACWXL 12
+CNAV+CF +L SS + R W L
Sbjct: 2946 ACNAVSCF-LQASSLLSSSNSKPLLTRVLWLL 2976
>SPBC26H8.03 |cho2||phosphatidylethanolamine N-methyltransferase
Cho2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 905
Score = 23.8 bits (49), Expect = 9.7
Identities = 10/34 (29%), Positives = 15/34 (44%)
Frame = -1
Query: 128 WMAVCSFSCNAVACFSTSGCALRRSSTVRSKFWR 27
W+ + S + F T+G R S + FWR
Sbjct: 105 WIVISSILAQVLLFFMTTGAVRRYSMMLCFFFWR 138
>SPAC6B12.09 |trm10||tRNA m|Schizosaccharomyces pombe|chr 1|||Manual
Length = 304
Score = 23.8 bits (49), Expect = 9.7
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Frame = +3
Query: 81 RETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKTESGIR*L--CXXXXXX 254
RE + RE E K + E GE + Q G S IR + C
Sbjct: 50 REKRAEMRREKKRLRKEERKRKIEAGEVVKSQ--KKRIRLGKVVPSSIRIVLDCAFDDLM 107
Query: 255 XXXXXXXCHQAVTRSHRPARCSLSPIQ-FLYNY 350
Q VTR H R +L P++ F N+
Sbjct: 108 NDKEINSLCQQVTRCHSANRTALHPVELFATNF 140
>SPCC23B6.04c |||sec14 cytosolic factor family|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1008
Score = 23.8 bits (49), Expect = 9.7
Identities = 12/47 (25%), Positives = 22/47 (46%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGE 146
R+ P +P + + S A + R T + +AAN+ + +GE
Sbjct: 70 RKSVPVGNPTVHTKTGSSSSPASKMRNTVNLQHIQAANQKTRNAEGE 116
>SPBC106.01 |mph1|SPBC1271.16c, SPBC243.01|dual specificity protein
kinase Mph1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 678
Score = 23.8 bits (49), Expect = 9.7
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 76 DVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQKLAPKLKAAYDDFVKHAEEV 255
DVE++A+ LH + T Q E Q A + + S L+PK+ +D+ A +
Sbjct: 253 DVERRASELHSRPVTVFQ----EPQRSASQ-----PYESHALSPKVAPLFDN--SQATPI 301
Query: 256 QKKVHEAAT 282
K+ + T
Sbjct: 302 PKRQQDVVT 310
>SPAC24C9.03 |mvd1||diphosphomevalonate decarboxylase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 393
Score = 23.8 bits (49), Expect = 9.7
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +1
Query: 25 ARQNLERTVEDLRKAHPDVEKQATALHE----KLQTAIQNTLKESQNLA 159
A + L VE+LRKA D+E++ L + KL +N + LA
Sbjct: 74 ANKRLRVCVEELRKARLDLEEENDDLDKIGALKLHVVSENNFPTAAGLA 122
>SPCC794.08 |||HEAT repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 3|||Manual
Length = 798
Score = 23.8 bits (49), Expect = 9.7
Identities = 18/49 (36%), Positives = 23/49 (46%)
Frame = +1
Query: 94 TALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQKLAPKLKAAYDDFVK 240
TA H KLQ NT KES V + H+ K A +L + FV+
Sbjct: 437 TAFH-KLQNEKLNTKKESSAPLSLVTDFLLHSWPKSAERLHTSQSPFVR 484
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,398,482
Number of Sequences: 5004
Number of extensions: 22420
Number of successful extensions: 111
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 105
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 111
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 130061696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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