Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C19
(392 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 34 0.047
03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,324... 33 0.082
07_03_1533 + 27523811-27524710 32 0.19
04_04_0585 - 26386248-26386271,26386510-26386699,26387363-263874... 31 0.25
02_04_0515 + 23582105-23583519,23583613-23583741,23583835-235839... 31 0.33
12_02_1015 + 25331667-25332169,25333305-25333406,25333775-253339... 29 1.0
05_01_0333 - 2614123-2614202,2614466-2614553,2614644-2614721,261... 29 1.0
02_01_0773 - 5760034-5760386,5760889-5760925,5761069-5761225,576... 29 1.3
01_06_1692 - 39232475-39232867,39233176-39233310,39233770-392339... 29 1.3
12_02_1067 - 25792295-25793167 29 1.8
04_04_0596 - 26497863-26497913,26498010-26498081,26499015-264990... 29 1.8
03_05_0432 - 24231984-24233048,24233391-24235160,24235261-242365... 29 1.8
01_01_0505 - 3695937-3695972,3696251-3696316,3696658-3696747,369... 29 1.8
03_05_0437 - 24293236-24294120 28 2.3
03_02_0407 - 8187956-8188099,8188203-8188371,8188456-8188625,818... 28 2.3
06_03_0672 + 23359510-23361253,23389969-23390203,23392078-233922... 28 3.1
02_05_1022 + 33570664-33570976,33572206-33573440,33573873-335740... 28 3.1
05_05_0352 + 24328117-24328303,24328451-24328559,24330634-243306... 27 4.1
09_01_0126 + 1896155-1896253,1897425-1897969,1898303-1898384,189... 27 5.4
08_02_1097 + 24284494-24284496,24284946-24285407,24285476-242864... 27 5.4
05_01_0054 + 379974-380215,380343-380556,381603-381892,382384-38... 27 5.4
01_01_0863 - 6724200-6724414,6726300-6726576,6726976-6727145,672... 27 5.4
12_01_0779 + 7129879-7130398,7130585-7130664 27 7.1
11_06_0374 + 22877325-22878500,22879898-22880014,22880131-228803... 27 7.1
10_07_0081 - 12716130-12716271,12716367-12716449,12716729-127167... 27 7.1
01_06_0787 - 31999632-32000045,32000128-32000214,32000295-320005... 27 7.1
12_01_0288 - 2160981-2161076,2161150-2161236,2161333-2161419,216... 26 9.4
11_06_0264 - 21785450-21786928 26 9.4
11_01_0285 - 2115051-2115146,2115220-2115306,2115417-2115503,211... 26 9.4
08_02_0921 - 22640125-22640268,22640349-22640423,22640496-226407... 26 9.4
08_02_0167 - 13564466-13566227,13566361-13566644,13566684-135675... 26 9.4
08_01_0090 - 649631-651162,653189-655019,655313-655365,655731-65... 26 9.4
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 26 9.4
06_03_0147 + 17236158-17236808 26 9.4
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 26 9.4
05_05_0170 + 22913791-22914315,22914418-22914581,22914675-229153... 26 9.4
05_05_0091 + 22319411-22320901 26 9.4
04_03_1031 + 21850857-21851009,21852229-21852350,21852447-218528... 26 9.4
04_03_0147 - 11853940-11854128,11854933-11855013,11855501-118555... 26 9.4
03_05_0738 + 27267514-27268279,27268373-27268395 26 9.4
01_06_0479 + 29631435-29631608,29632769-29632864,29633065-296331... 26 9.4
01_01_0717 - 5559414-5559435,5559589-5559764,5559876-5559917,556... 26 9.4
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 33.9 bits (74), Expect = 0.047
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 6/106 (5%)
Frame = +1
Query: 34 NLERTVEDLRKAHPDVEKQATALHEKLQ---TAIQNTLKES-QNLAKEVGVNMDHTSQKL 201
NLE V+DLR +VE L KL+ T I + L+ S LA N D T QKL
Sbjct: 1439 NLEEQVDDLRSTKDEVEILNMVLKSKLEEQRTEILSLLQNSGHELANFKEQNKDLT-QKL 1497
Query: 202 APK-LKA-AYDDFVKHAEEVQKKVHEAATKQ*RALIARRVALSLRY 333
A + LKA + + H E+++K ++ +L A + +L + +
Sbjct: 1498 AEQTLKAEEFKNLSIHLRELKEKAEAGRKEKEGSLFAMQESLRIAF 1543
>03_01_0423 + 3240224-3240394,3241464-3241628,3242322-3242339,
3242494-3242836,3244138-3248540,3248928-3249107,
3249108-3250892,3251055-3252173
Length = 2727
Score = 33.1 bits (72), Expect = 0.082
Identities = 25/102 (24%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = +1
Query: 31 QNLERTVEDLRKAHPDVEKQATALHEK--LQTAIQNTLKESQN-LAKEVGVNMDHTSQKL 201
++LE VED D+EK+ T L E+ +Q L+E+ N L EVG++ + + L
Sbjct: 2169 RDLEVAVEDAEGVKVDLEKKITTLTERGAVQDNETRLLREANNTLQVEVGIH-EQKEESL 2227
Query: 202 APKLKAAYDDFVKHAEEVQKKVHEAATKQ*RALIARRVALSL 327
+ + +H E+ V + T+ ++ L +
Sbjct: 2228 MSTFETMRKEAEQHEREITLLVCDTITRSVNTMVLEEQVLEM 2269
>07_03_1533 + 27523811-27524710
Length = 299
Score = 31.9 bits (69), Expect = 0.19
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Frame = +3
Query: 39 GAHSRGSPQGAPRRRETSHRITREAANRHPEH---TKGEPEPGEGSRRQHG 182
G H+RGS RRR R +R RH H +GE + G HG
Sbjct: 158 GNHTRGSGGVVVRRRHRRRRRSRRRRRRHRHHPGVREGEDDDSGGDDEDHG 208
>04_04_0585 -
26386248-26386271,26386510-26386699,26387363-26387463,
26387554-26387685,26387759-26387857,26387956-26388127,
26388217-26388512,26388601-26388726,26388848-26389062,
26389154-26389225,26389299-26389368,26389441-26389517,
26389605-26389923,26390034-26390225,26390321-26390551,
26390585-26390950,26392251-26392313,26392394-26392456,
26392544-26392642,26393497-26393523,26394299-26394358,
26395230-26396147,26396243-26397268
Length = 1645
Score = 31.5 bits (68), Expect = 0.25
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEG 164
++K P+ P G SR P G +R ++HR A N + + P P +G
Sbjct: 602 KQKLPSQEPSGGGRSRVGPTGNAQRGRSAHRGGGGAVNARSD-VRAAPVPAQG 653
>02_04_0515 +
23582105-23583519,23583613-23583741,23583835-23583970,
23584051-23584139,23584236-23584347,23584427-23584533,
23584630-23584723
Length = 693
Score = 31.1 bits (67), Expect = 0.33
Identities = 22/61 (36%), Positives = 29/61 (47%)
Frame = +3
Query: 42 AHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKTESG 221
+H R SP+ PRRR + R +R P GE G GS R G +TG E+G
Sbjct: 62 SHRRDSPRPPPRRRPSEGR----TEDREP----GEVSGGSGSERS-GERPMKTGEPRENG 112
Query: 222 I 224
+
Sbjct: 113 V 113
>12_02_1015 +
25331667-25332169,25333305-25333406,25333775-25333919,
25334002-25334186,25334297-25334401,25334507-25334604,
25334686-25334924,25335030-25335123,25335190-25335275,
25335579-25335677,25335804-25335869
Length = 573
Score = 29.5 bits (63), Expect = 1.0
Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = -2
Query: 172 RRLPSPG-SGSPLVCSGWRFAASRVMR 95
RRLP G + S VC GWR A RV R
Sbjct: 108 RRLPPRGVAASAAVCRGWRGCARRVWR 134
>05_01_0333 -
2614123-2614202,2614466-2614553,2614644-2614721,
2614795-2614887,2614982-2615101,2615685-2615726,
2615822-2616091,2617188-2617339,2617771-2618233
Length = 461
Score = 29.5 bits (63), Expect = 1.0
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 1/76 (1%)
Frame = +3
Query: 3 TRRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANR-HPEHTKGEPEPGEGSRRQH 179
T RK P S + A + + +G ++ R+TR A R P + P P E SR +
Sbjct: 21 TSRK-PDSGVPVAADADAAKEGDAPGSGSTTRVTRSRAARCRPGSQEPLPPPSERSRSRR 79
Query: 180 GSHLTETGAKTESGIR 227
+ T+T + IR
Sbjct: 80 TTLATDTAVRERKRIR 95
>02_01_0773 -
5760034-5760386,5760889-5760925,5761069-5761225,
5762584-5762773,5762873-5763154,5763582-5763645
Length = 360
Score = 29.1 bits (62), Expect = 1.3
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +1
Query: 13 SXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 177
S QQAR+ + + DL D+EK+ + L E+ T +QN + + + K V+
Sbjct: 186 SAQQARERKKAYLNDLEVKVKDLEKKNSELEERFST-LQNENQMLRQILKNTTVS 239
>01_06_1692 -
39232475-39232867,39233176-39233310,39233770-39233916,
39234131-39234303,39235201-39235288,39235508-39235725,
39235968-39236025,39236259-39236315,39237022-39237099
Length = 448
Score = 29.1 bits (62), Expect = 1.3
Identities = 15/61 (24%), Positives = 32/61 (52%)
Frame = +1
Query: 121 AIQNTLKESQNLAKEVGVNMDHTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAATKQ*RAL 300
A+++ L E++++AKE+ N+ + APK + DF+ E ++ ++ A+
Sbjct: 386 ALKSYLNENESIAKELETNLRKLMETQAPKKQEDEGDFLSDLPEESLATETSSEEELAAV 445
Query: 301 I 303
I
Sbjct: 446 I 446
>12_02_1067 - 25792295-25793167
Length = 290
Score = 28.7 bits (61), Expect = 1.8
Identities = 15/36 (41%), Positives = 17/36 (47%), Gaps = 2/36 (5%)
Frame = -2
Query: 172 RRLP--SPGSGSPLVCSGWRFAASRVMRWLVSRRRG 71
RRLP + +PLVC WR AA W RG
Sbjct: 28 RRLPLDDVAAAAPLVCRSWRAAARDASLWRALDLRG 63
>04_04_0596 -
26497863-26497913,26498010-26498081,26499015-26499093,
26499440-26499553,26499822-26499871,26500353-26500398,
26501100-26501719
Length = 343
Score = 28.7 bits (61), Expect = 1.8
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +1
Query: 40 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEV 168
+R +E LR+ E++ AL +QT + +KE L +E+
Sbjct: 275 QRRLELLRERERQKEEEVAALKRSMQTGMAQAMKEQARLREEM 317
>03_05_0432 -
24231984-24233048,24233391-24235160,24235261-24236582,
24236668-24237013
Length = 1500
Score = 28.7 bits (61), Expect = 1.8
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Frame = +1
Query: 31 QNLERTVEDLRKAHPDV-EKQATALHE--KLQTAIQNTLKESQNLAKEVGVNMDHTSQKL 201
QNLE +L K H D+ E++ + L E KLQ I+ KE +L +D +K+
Sbjct: 565 QNLEAHYAELEKRHSDLQEEKGSVLDEVIKLQEQIRFERKEHNDLEHSRKSQLDALHEKI 624
Query: 202 APKLKAAYDDFVKHAEEVQKKVHEAATK 285
+ ++ + EE ++ + +A T+
Sbjct: 625 NVLSQEGWNR-EEQLEEEEQNIVKAQTE 651
>01_01_0505 -
3695937-3695972,3696251-3696316,3696658-3696747,
3696934-3697143,3697371-3697404,3697566-3697912
Length = 260
Score = 28.7 bits (61), Expect = 1.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -1
Query: 179 MLTPTSFARFWLSFSVFWMAVCSFSCNAVACF 84
M T+ + +WL++ AV +SC +ACF
Sbjct: 1 MAVDTTASEYWLNWRFMLCAVWVYSCMVLACF 32
>03_05_0437 - 24293236-24294120
Length = 294
Score = 28.3 bits (60), Expect = 2.3
Identities = 11/20 (55%), Positives = 13/20 (65%)
Frame = -2
Query: 151 SGSPLVCSGWRFAASRVMRW 92
S +PLVC GWR AA+ W
Sbjct: 36 SAAPLVCRGWRRAAADPSLW 55
>03_02_0407 -
8187956-8188099,8188203-8188371,8188456-8188625,
8188737-8188915,8189014-8189079,8189171-8189344,
8189593-8189891,8190136-8190236,8190328-8190412,
8190527-8190680,8190781-8190986,8192403-8192647
Length = 663
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +3
Query: 81 RETSHRITR-EAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKTESGIR 227
RET ++ R + A + KG P P H H+T T A ++S ++
Sbjct: 90 RETGPKVVRGDPARKGEAAAKGAPSPHPQPVHHHHPHVTPTIAVSDSSLK 139
>06_03_0672 +
23359510-23361253,23389969-23390203,23392078-23392234,
23392535-23392597
Length = 732
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/55 (29%), Positives = 28/55 (50%)
Frame = +1
Query: 13 SXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 177
S QQAR+ + + +L D+E+ + L E+L T +QN + + + K N
Sbjct: 667 SAQQARERKKAYMSELEARVKDLERSNSELEERLST-LQNENQMLRQVLKNTTAN 720
>02_05_1022 +
33570664-33570976,33572206-33573440,33573873-33574013,
33574242-33574796,33574914-33575015
Length = 781
Score = 27.9 bits (59), Expect = 3.1
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = -2
Query: 151 SGSPLVCSGWRFAASRVMRWLVSRRRGAPCGDPRLCAPSSGELV 20
+ SP WR A R + S R P DP+LC S G +V
Sbjct: 474 TASPPPVPPWRAAIPRNKAEMTSGSRPLPWLDPQLCQGSGGVVV 517
>05_05_0352 +
24328117-24328303,24328451-24328559,24330634-24330692,
24331139-24331220,24331361-24331481,24331751-24332278,
24332724-24332831,24332934-24333131,24334043-24334234,
24336116-24336199,24336385-24336525,24336683-24336748,
24336880-24337047,24337134-24337463,24337568-24337666
Length = 823
Score = 27.5 bits (58), Expect = 4.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +1
Query: 217 AAYDDFVKHAEEVQKKVHEAATKQ*RALIARR 312
A Y D K+ EE+Q + E +Q AL+ +R
Sbjct: 175 ALYPDIDKYEEEIQASIAETFRRQSEALVKKR 206
>09_01_0126 +
1896155-1896253,1897425-1897969,1898303-1898384,
1898710-1898832
Length = 282
Score = 27.1 bits (57), Expect = 5.4
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +3
Query: 42 AHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKT 212
+HSR P P R+ETS + + P+ G P P S R G+ + KT
Sbjct: 174 SHSRSRPLPIPCRQETS---AVQGLDEDPDGNGGRPHPRYRS-RSRGTREARSSKKT 226
>08_02_1097 +
24284494-24284496,24284946-24285407,24285476-24286450,
24286566-24286655,24286760-24287021,24287447-24287472
Length = 605
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +3
Query: 75 RRRETSHRITREAANRHPEHTKGEPEPGEGSRR 173
R R+TSH + ++ A R + E + G+G R
Sbjct: 230 RHRDTSHELLQDDARRRRADAEAEQQGGDGEVR 262
>05_01_0054 + 379974-380215,380343-380556,381603-381892,382384-382560,
382705-383481,383572-383645,383757-383819,383919-384007,
384106-384201,384319-384978,385613-385687,386422-386492,
386578-386635,386900-387104,387379-387869
Length = 1193
Score = 27.1 bits (57), Expect = 5.4
Identities = 14/48 (29%), Positives = 24/48 (50%)
Frame = +1
Query: 34 NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 177
N+ + + +LRK D KQ KL+ AIQ+T + ++ +N
Sbjct: 904 NINKMISELRKRLHDQVKQKKCKLSKLEKAIQDTKSIEERSLEQHAMN 951
>01_01_0863 -
6724200-6724414,6726300-6726576,6726976-6727145,
6727250-6727526
Length = 312
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +1
Query: 49 VEDLRKAHPDVEKQATALHEKLQTAIQN 132
VE+LR+ HPDV T L + +QN
Sbjct: 210 VEELREKHPDVAIMHTDLFRHVSEMVQN 237
>12_01_0779 + 7129879-7130398,7130585-7130664
Length = 199
Score = 26.6 bits (56), Expect = 7.1
Identities = 16/42 (38%), Positives = 18/42 (42%)
Frame = +3
Query: 21 TSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGE 146
TSS + S S PRRR HR R A HP + E
Sbjct: 7 TSSSSSSSSSPSSSPPPPRRRHRHHR--RAARRTHPVEAEAE 46
>11_06_0374 +
22877325-22878500,22879898-22880014,22880131-22880322,
22880742-22880783
Length = 508
Score = 26.6 bits (56), Expect = 7.1
Identities = 11/28 (39%), Positives = 13/28 (46%)
Frame = +3
Query: 108 EAANRHPEHTKGEPEPGEGSRRQHGSHL 191
E H E EP PG RR+HG +
Sbjct: 318 EVRREHGEEVHVEPAPGGEVRREHGEEV 345
>10_07_0081 -
12716130-12716271,12716367-12716449,12716729-12716785,
12716886-12716942,12717014-12717113,12717204-12717274,
12718284-12718460,12719142-12719312,12722151-12722234,
12722310-12722354,12722447-12722537,12722745-12722863,
12723213-12723434,12723630-12723854,12725366-12725571,
12726081-12726258,12726702-12726762,12727930-12728039,
12728126-12728257,12729136-12729208,12729608-12729645,
12730373-12730474,12730565-12730622,12731071-12731172,
12731240-12731386,12732023-12732159,12732256-12732405,
12733103-12733259,12733615-12733673,12733982-12734138,
12734209-12734354,12739177-12739320,12739478-12739606
Length = 1309
Score = 26.6 bits (56), Expect = 7.1
Identities = 15/53 (28%), Positives = 26/53 (49%)
Frame = +1
Query: 10 GSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEV 168
G+ ++A+ LER++EDL +Q A E + LK ++L E+
Sbjct: 810 GALREAKGKLERSLEDLTLRFTLERRQRVAAEESKALEVSKLLKIVESLKCEL 862
>01_06_0787 -
31999632-32000045,32000128-32000214,32000295-32000584,
32000670-32000844,32000930-32001142,32001227-32001328,
32001418-32001822,32001922-32002134,32002312-32002357,
32002602-32002867,32003936-32004012,32004095-32004170,
32004339-32004418,32004945-32005036,32005132-32005171,
32005301-32005400,32005815-32005962,32006071-32006153,
32006207-32006383
Length = 1027
Score = 26.6 bits (56), Expect = 7.1
Identities = 18/52 (34%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = +3
Query: 27 SPELGAHSRGSPQGA--PRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQ 176
S E G H +G+ RRR+ HR T E K P P E R+Q
Sbjct: 344 SGEDGGHDDDDGEGSNKKRRRKNYHRHTAEQIRIMEALFKESPHPDERQRQQ 395
>12_01_0288 -
2160981-2161076,2161150-2161236,2161333-2161419,
2161641-2161726,2161805-2161908,2162618-2162704,
2162790-2162913,2163058-2163176,2163268-2163397,
2163583-2163671,2163804-2163892,2164579-2164672,
2164778-2164857,2164952-2165041,2166307-2166393,
2166495-2166539,2166966-2167042,2167120-2167225,
2167383-2167464,2167553-2167624,2168106-2168183,
2168259-2168349,2168826-2168979
Length = 717
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 43 RTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEV 168
+ ++DL P V L+ ++ AI N +KES L + +
Sbjct: 356 KLMDDLAALRPTVFPSVPRLYNRIYAAITNAVKESGGLKERL 397
>11_06_0264 - 21785450-21786928
Length = 492
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = -2
Query: 145 SPLVCSGWRFAASRVMRWLVSRRRGAPC 62
S CS WR AA+ R +S R PC
Sbjct: 55 SGAACSAWRAAAAAFRRLRLSTPRQPPC 82
>11_01_0285 -
2115051-2115146,2115220-2115306,2115417-2115503,
2115724-2115809,2115889-2115992,2117447-2117533,
2117621-2117744,2118420-2118538,2118626-2118755,
2118902-2118990,2119122-2119210,2119985-2120078,
2120187-2120266,2120363-2120452,2121195-2121281,
2121381-2121425,2121847-2121923,2121997-2122102,
2122258-2122339,2122430-2122501,2122502-2122585,
2123007-2123084,2123155-2123224,2123737-2123851
Length = 725
Score = 26.2 bits (55), Expect = 9.4
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 43 RTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNL 156
+ ++DL P V L+ ++ AI N +KES L
Sbjct: 364 KLMDDLAALRPTVFSSVPRLYNRIYAAITNAVKESGGL 401
>08_02_0921 -
22640125-22640268,22640349-22640423,22640496-22640757,
22642286-22642578,22642609-22642812,22643216-22643901,
22643958-22644033
Length = 579
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/29 (34%), Positives = 12/29 (41%)
Frame = -1
Query: 149 WLSFSVFWMAVCSFSCNAVACFSTSGCAL 63
W F + C FSC +AC C L
Sbjct: 107 WFPTYNFQLHSCLFSCRELACLDLDSCRL 135
>08_02_0167 -
13564466-13566227,13566361-13566644,13566684-13567540,
13567684-13567957,13567973-13568218
Length = 1140
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +3
Query: 60 PQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHG 182
P APR + S + + NR P +PG+G R G
Sbjct: 73 PHPAPRPQFVSQQQQNQQGNRAPRPLAPAVQPGQGRRDVQG 113
>08_01_0090 -
649631-651162,653189-655019,655313-655365,655731-655735,
656209-656411,656837-657292,657718-657805,657917-658017,
658404-658631,659128-659445,659528-659812,660148-660711
Length = 1887
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +3
Query: 39 GAHSRGSPQGAPRRRETSHRITR----EAANRHPEHTKGEPEPG 158
G RG +G PRRR +S+ + R ++ RH EH + E E G
Sbjct: 11 GEEQRGG-EGKPRRRPSSNSLRRLVSYNSSKRH-EHFEEEDEEG 52
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/26 (34%), Positives = 17/26 (65%)
Frame = +3
Query: 78 RRETSHRITREAANRHPEHTKGEPEP 155
+R++S ++TREA +H + + P P
Sbjct: 570 KRKSSKKVTREAVEQHTKSSSRAPTP 595
>06_03_0147 + 17236158-17236808
Length = 216
Score = 26.2 bits (55), Expect = 9.4
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +3
Query: 57 SPQGAPRRRETSHRITR-EAANRHPEHTKGEPEPGEGSRRQHGSHLTE 197
SP+ RR + I+ EAA H + G P PG+ + G LTE
Sbjct: 21 SPRAFQRRWAPADEISLLEAAASHRQRHGGMPSPGDLAAALRGRLLTE 68
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/72 (27%), Positives = 28/72 (38%)
Frame = +1
Query: 46 TVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQKLAPKLKAAY 225
T ED + +VE A +K + KE + AKE + APK K
Sbjct: 363 TAEDGKAGEGEVESAAAKKKKKKK----EKEKEKKAAAKEADAKKEEEKAVEAPKGKVDM 418
Query: 226 DDFVKHAEEVQK 261
KH E+Q+
Sbjct: 419 KKLPKHVREMQE 430
>05_05_0170 +
22913791-22914315,22914418-22914581,22914675-22915325,
22915425-22915542,22915635-22915823,22915948-22916118
Length = 605
Score = 26.2 bits (55), Expect = 9.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +1
Query: 103 HEKLQTAIQNTLKESQNLAKEVGVNM 180
HE++ TAI L+ES+ + VG N+
Sbjct: 185 HEQIDTAIATALRESKPVYISVGCNL 210
>05_05_0091 + 22319411-22320901
Length = 496
Score = 26.2 bits (55), Expect = 9.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -2
Query: 136 VCSGWRFAASRVMRWLVSRRR 74
+ GWR AA R++ WL R
Sbjct: 405 LAEGWRSAAGRILAWLAPMAR 425
>04_03_1031 +
21850857-21851009,21852229-21852350,21852447-21852891,
21852981-21853087,21853192-21854524,21854632-21854859,
21854951-21855181,21855278-21855537,21855651-21856113
Length = 1113
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/61 (24%), Positives = 31/61 (50%)
Frame = +1
Query: 85 KQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQKLAPKLKAAYDDFVKHAEEVQKK 264
K + E + +Q L+ AK ++ Q+++P+ +A+ D++KHAE + K
Sbjct: 217 KTVCSKRESERRQLQEQLESKLQKAKRQ--RAEYLKQRVSPR-SSAHADYIKHAEFLSTK 273
Query: 265 V 267
+
Sbjct: 274 L 274
>04_03_0147 -
11853940-11854128,11854933-11855013,11855501-11855584,
11855663-11855735,11855888-11855949,11856246-11856327,
11857643-11858262
Length = 396
Score = 26.2 bits (55), Expect = 9.4
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 141 GEPEPGEGSRRQHGS 185
G PEP G RRQ GS
Sbjct: 139 GSPEPARGPRRQRGS 153
>03_05_0738 + 27267514-27268279,27268373-27268395
Length = 262
Score = 26.2 bits (55), Expect = 9.4
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +3
Query: 18 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEP 155
P ++ E+GA R A + S T RH + K +P+P
Sbjct: 9 PATTDEVGAPPRDHHHAAKKSPAPSATTTTATRQRHGQEPKPKPKP 54
>01_06_0479 +
29631435-29631608,29632769-29632864,29633065-29633106,
29633220-29633306,29635246-29635272,29635536-29635916
Length = 268
Score = 26.2 bits (55), Expect = 9.4
Identities = 20/68 (29%), Positives = 28/68 (41%)
Frame = +3
Query: 21 TSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTET 200
+SS GA P+G R+R + R R AA+ P P P R H ++
Sbjct: 16 SSSSGDGAAVSDRPRGVTRKRRSGGRCPRPAASLRP----AAPRPSSSDARARTRH--KS 69
Query: 201 GAKTESGI 224
G SG+
Sbjct: 70 GICVLSGV 77
>01_01_0717 -
5559414-5559435,5559589-5559764,5559876-5559917,
5560039-5560080,5560268-5560370,5560466-5560527,
5561638-5561719,5567067-5567353,5568085-5568184,
5568584-5568651,5569819-5569860,5570001-5570032,
5572616-5572652
Length = 364
Score = 26.2 bits (55), Expect = 9.4
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +1
Query: 1 ARGGSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVN 177
+RG + A +++ TVE +KA+ D T Q Q + K Q ++ N
Sbjct: 178 SRGRLYEYANNSVKSTVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNAN 236
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,075,866
Number of Sequences: 37544
Number of extensions: 193894
Number of successful extensions: 1068
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 672845152
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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