Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C19
(392 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 34 0.032
U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical pr... 34 0.032
Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical pr... 31 0.29
Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical p... 30 0.51
Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical p... 30 0.51
AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical ... 30 0.51
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 29 1.2
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 29 1.2
U49947-5|AAU05585.1| 111|Caenorhabditis elegans Hypothetical pr... 29 1.2
U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical pr... 29 1.2
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 29 1.6
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 29 1.6
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 29 1.6
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 29 1.6
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 29 1.6
AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical ... 29 1.6
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 29 1.6
Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical p... 28 2.1
Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical pr... 28 2.1
Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical pr... 27 3.6
Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical pr... 27 3.6
U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical pr... 27 3.6
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 27 3.6
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 27 3.6
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 27 3.6
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 27 3.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 27 3.6
AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threon... 27 3.6
AC006742-5|AAF60496.1| 239|Caenorhabditis elegans Hypothetical ... 27 3.6
AC006742-4|AAF60495.1| 239|Caenorhabditis elegans Hypothetical ... 27 3.6
Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical pr... 27 4.8
Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical pr... 27 4.8
AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein. 27 4.8
Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical pr... 27 6.3
Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical p... 27 6.3
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 6.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 27 6.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 27 6.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 27 6.3
Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical pr... 26 8.4
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 26 8.4
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 26 8.4
U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical p... 26 8.4
U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical pr... 26 8.4
AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidas... 26 8.4
AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical ... 26 8.4
AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical... 26 8.4
AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical ... 26 8.4
AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical ... 26 8.4
AF016665-6|AAL02468.1| 655|Caenorhabditis elegans Hypothetical ... 26 8.4
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 34.3 bits (75), Expect = 0.032
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRR 173
RR+ P+ S R SP APRRR++ R R P + P RR
Sbjct: 466 RRRSPSGSKSRSPRRRRSPAAAPRRRQSPQRRRSPRRRRSPSSSSRSRSPPPPPRR 521
>U41038-5|AAK29710.4| 519|Caenorhabditis elegans Hypothetical
protein F59C12.3 protein.
Length = 519
Score = 34.3 bits (75), Expect = 0.032
Identities = 27/91 (29%), Positives = 47/91 (51%), Gaps = 6/91 (6%)
Frame = +1
Query: 31 QNLERTVEDLRKAHPDVEKQ----ATALHEKLQTAIQNTLKESQNLAKEVGVN-MDHTSQ 195
Q LER V DLRK H D +Q + + +T + + LKE ++ K++ +N +
Sbjct: 367 QQLERMVNDLRKTHGDKTEQRKSTLATITDNFETQV-DKLKE-ESYEKDLIINELRSERD 424
Query: 196 KLAPKL-KAAYDDFVKHAEEVQKKVHEAATK 285
K A + K + D+ + EE+++K+ E K
Sbjct: 425 KYAAMVDKNSGDEALSRMEEIRQKIQERKKK 455
>Z29095-4|CAA82348.3| 444|Caenorhabditis elegans Hypothetical
protein R10E11.5 protein.
Length = 444
Score = 31.1 bits (67), Expect = 0.29
Identities = 16/67 (23%), Positives = 34/67 (50%)
Frame = +1
Query: 22 QARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQKL 201
Q +N++ V +++K DVEK + + ++ + K + ++G +D+TSQ +
Sbjct: 319 QTVKNIKSNVNEVKK---DVEKNIAEKVDDITKELEKSAKSLEETTDKIGSKIDNTSQAI 375
Query: 202 APKLKAA 222
L+ A
Sbjct: 376 KSNLEEA 382
>Z48055-11|CAI58650.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAH----PDVEKQATALHEKLQTAI---QNTLKESQNLAKEVGVN 177
++ + LE+ +EDLRK H ++EK+ + EK + AI + KE++ + KE V
Sbjct: 369 KELKLQLEKDMEDLRKEHEGQMAELEKRLEKVSEKEKEAIEQLEKIQKENKTIVKE-NVY 427
Query: 178 MDHTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 279
+ + Q L ++ + A +++ H+ A
Sbjct: 428 LSESKQVLLESEINLKNELDEMAVKLRNSQHQVA 461
>Z29443-14|CAI59118.1| 1013|Caenorhabditis elegans Hypothetical
protein T07C4.10 protein.
Length = 1013
Score = 30.3 bits (65), Expect = 0.51
Identities = 24/94 (25%), Positives = 47/94 (50%), Gaps = 7/94 (7%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAH----PDVEKQATALHEKLQTAI---QNTLKESQNLAKEVGVN 177
++ + LE+ +EDLRK H ++EK+ + EK + AI + KE++ + KE V
Sbjct: 369 KELKLQLEKDMEDLRKEHEGQMAELEKRLEKVSEKEKEAIEQLEKIQKENKTIVKE-NVY 427
Query: 178 MDHTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 279
+ + Q L ++ + A +++ H+ A
Sbjct: 428 LSESKQVLLESEINLKNELDEMAVKLRNSQHQVA 461
>AL032655-2|CAB60457.1| 561|Caenorhabditis elegans Hypothetical
protein Y6B3B.4 protein.
Length = 561
Score = 30.3 bits (65), Expect = 0.51
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Frame = +1
Query: 25 ARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNM----DHTS 192
+R+ + +D K H +K A L ++LQ A + LKE + +EV + +
Sbjct: 201 SRRRGHKDDDDFGKRHEMKQKHAEELRQQLQEAKASKLKELTSRVEEVRMKQEALKERKR 260
Query: 193 QKLAPKLKAAYDDFVKHAEEVQKKVHE 273
Q L +++ A D+ K+ EV ++ +
Sbjct: 261 QLLEARMQRASDNRDKNIMEVIRRAKD 287
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical
protein F40F11.2b protein.
Length = 1607
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 60 PQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKTES 218
PQ AP R+ N+ H +P P G+ +Q G L G+ S
Sbjct: 527 PQDAPHLRQQLITNVNATTNKQMVHRSQDPTPSPGNLQQFGEPLQRHGSYPHS 579
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical
protein F40F11.2a protein.
Length = 1593
Score = 29.1 bits (62), Expect = 1.2
Identities = 15/53 (28%), Positives = 21/53 (39%)
Frame = +3
Query: 60 PQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTETGAKTES 218
PQ AP R+ N+ H +P P G+ +Q G L G+ S
Sbjct: 513 PQDAPHLRQQLITNVNATTNKQMVHRSQDPTPSPGNLQQFGEPLQRHGSYPHS 565
>U49947-5|AAU05585.1| 111|Caenorhabditis elegans Hypothetical
protein C30G4.4a protein.
Length = 111
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 12 KXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEG--SRRQHGS 185
+ P SP G H+ P A ++ E +R +R ++ HP + +P G +++ S
Sbjct: 32 RDPYFSPN-GKHAIAKPTAAIKKEEIVNRSSRSLSDIHPSSSPSVVQPTSGIPVQQRPAS 90
Query: 186 HLTETGAK 209
HL K
Sbjct: 91 HLIAPNPK 98
>U49947-4|AAU05586.1| 192|Caenorhabditis elegans Hypothetical
protein C30G4.4b protein.
Length = 192
Score = 29.1 bits (62), Expect = 1.2
Identities = 18/68 (26%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = +3
Query: 12 KXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEG--SRRQHGS 185
+ P SP G H+ P A ++ E +R +R ++ HP + +P G +++ S
Sbjct: 58 RDPYFSPN-GKHAIAKPTAAIKKEEIVNRSSRSLSDIHPSSSPSVVQPTSGIPVQQRPAS 116
Query: 186 HLTETGAK 209
HL K
Sbjct: 117 HLIAPNPK 124
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 114 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 168
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 169 LA-MVEADLERAEERAEAGENKIVE 192
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 114 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 168
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 169 LA-MVEADLERAEERAEAGENKIVE 192
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 114 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 168
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 169 LA-MVEADLERAEERAEAGENKIVE 192
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 114 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 168
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 169 LA-MVEADLERAEERAEAGENKIVE 192
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 114 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 168
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 169 LA-MVEADLERAEERAEAGENKIVE 192
>AL132877-2|CAC70113.2| 193|Caenorhabditis elegans Hypothetical
protein Y105E8B.1b protein.
Length = 193
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 23 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 77
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 78 LA-MVEADLERAEERAEAGENKIVE 101
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 28.7 bits (61), Expect = 1.6
Identities = 24/85 (28%), Positives = 46/85 (54%)
Frame = +1
Query: 19 QQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQK 198
++A N++ + E +RK +E ++ E+ T ++ LKE+Q LA+E D ++K
Sbjct: 114 EEATHNVDES-ERVRKV---MENRSLQDEERANT-VEAQLKEAQLLAEEADRKYDEVARK 168
Query: 199 LAPKLKAAYDDFVKHAEEVQKKVHE 273
LA ++A + + AE + K+ E
Sbjct: 169 LA-MVEADLERAEERAEAGENKIVE 192
>Z81494-10|CAN86581.1| 1507|Caenorhabditis elegans Hypothetical
protein F02E9.4b protein.
Length = 1507
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 18 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 131
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>Z81494-9|CAB04052.2| 1505|Caenorhabditis elegans Hypothetical
protein F02E9.4a protein.
Length = 1505
Score = 28.3 bits (60), Expect = 2.1
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +3
Query: 18 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPE 131
P+ P + A S G PQ PR+++ R R + PE
Sbjct: 244 PSVPPVVPATSAGCPQREPRQQQGGRRQNRPGRRKKPE 281
>Z70207-8|CAM33501.1| 835|Caenorhabditis elegans Hypothetical
protein F15A2.6b protein.
Length = 835
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQG--APRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQH 179
+R+ P + RG+ Q P++R S R +R + + P G ++
Sbjct: 370 KRRRPAQEDDTEIVLRGAAQNNDPPKKRTDSSRTSRYPMGSIADGSPINPRKTYGRNQKS 429
Query: 180 GSHLTETGAKTES 218
G H + G+ TES
Sbjct: 430 GRHSSLGGSPTES 442
>Z70207-5|CAA94127.2| 914|Caenorhabditis elegans Hypothetical
protein F15A2.6a protein.
Length = 914
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQG--APRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQH 179
+R+ P + RG+ Q P++R S R +R + + P G ++
Sbjct: 370 KRRRPAQEDDTEIVLRGAAQNNDPPKKRTDSSRTSRYPMGSIADGSPINPRKTYGRNQKS 429
Query: 180 GSHLTETGAKTES 218
G H + G+ TES
Sbjct: 430 GRHSSLGGSPTES 442
>Z12017-1|CAA78047.1| 458|Caenorhabditis elegans Hypothetical
protein R08D7.1 protein.
Length = 458
Score = 27.5 bits (58), Expect = 3.6
Identities = 19/73 (26%), Positives = 29/73 (39%)
Frame = +3
Query: 9 RKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSH 188
R +SP R S PRRR +S R+ + P + E + +++
Sbjct: 187 RHDSDNSPPRNRSRRDSDNSPPRRRPSSPARRRKDDDLSPPRKSRKIEEPKKIKKEEPDS 246
Query: 189 LTETGAKTESGIR 227
TET +T G R
Sbjct: 247 DTETSGRTLEGKR 259
>U40954-6|ABQ13043.1| 127|Caenorhabditis elegans Hypothetical
protein ZK813.7 protein.
Length = 127
Score = 27.5 bits (58), Expect = 3.6
Identities = 16/54 (29%), Positives = 22/54 (40%)
Frame = +3
Query: 27 SPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSH 188
S EL G PQ P RR + R +RE + + + G G + SH
Sbjct: 57 SSELKPAGFGRPQPGPIRRSSESRESRERRKNNTPNPLNQQPTGNGFVPRRSSH 110
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 4 RGGSXQQARQNLERTVEDLRKAHPDVE--KQATALHEKLQTAIQNTLKESQNLAKE 165
R Q +L++ ++LRKA + ++ EKL ++QN+L E+ K+
Sbjct: 392 RSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 447
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 4 RGGSXQQARQNLERTVEDLRKAHPDVE--KQATALHEKLQTAIQNTLKESQNLAKE 165
R Q +L++ ++LRKA + ++ EKL ++QN+L E+ K+
Sbjct: 392 RSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 447
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 4 RGGSXQQARQNLERTVEDLRKAHPDVE--KQATALHEKLQTAIQNTLKESQNLAKE 165
R Q +L++ ++LRKA + ++ EKL ++QN+L E+ K+
Sbjct: 152 RSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 207
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 27.5 bits (58), Expect = 3.6
Identities = 15/56 (26%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 4 RGGSXQQARQNLERTVEDLRKAHPDVE--KQATALHEKLQTAIQNTLKESQNLAKE 165
R Q +L++ ++LRKA + ++ EKL ++QN+L E+ K+
Sbjct: 392 RSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSLNEAHRQHKQ 447
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 27.5 bits (58), Expect = 3.6
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 39 GAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEP 155
G H +G PQ P H +R PEH G P P
Sbjct: 126 GHHFQGPPQHFPPGPPRPHFPGPPGPHRPPEHYPGPPRP 164
>AF316542-1|AAG50270.1| 914|Caenorhabditis elegans serine/threonine
kinase SAD-1 protein.
Length = 914
Score = 27.5 bits (58), Expect = 3.6
Identities = 18/73 (24%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Frame = +3
Query: 6 RRKXPTSSPELGAHSRGSPQG--APRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQH 179
+R+ P + RG+ Q P++R S R +R + + P G ++
Sbjct: 370 KRRRPAQEDDTEIVLRGAAQNNDPPKKRTDSSRTSRYPMGSIADGSPINPRKTYGRNQKS 429
Query: 180 GSHLTETGAKTES 218
G H + G+ TES
Sbjct: 430 GRHSSLGGSPTES 442
>AC006742-5|AAF60496.1| 239|Caenorhabditis elegans Hypothetical
protein Y38C1AB.7 protein.
Length = 239
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/88 (19%), Positives = 42/88 (47%)
Frame = +1
Query: 10 GSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHT 189
G ++ +ER ++++ ++ L + + T ++ ++ + L +++ T
Sbjct: 113 GLNRKLTNKMERNRSEMKQFKMEMMSSFNGLKQNMDTKMEEMMQLMRALIQDL------T 166
Query: 190 SQKLAPKLKAAYDDFVKHAEEVQKKVHE 273
SQKLA +++ F + E+QKK +
Sbjct: 167 SQKLAQNPESSKCSFPNYGLEIQKKFED 194
>AC006742-4|AAF60495.1| 239|Caenorhabditis elegans Hypothetical
protein Y38C1AB.3 protein.
Length = 239
Score = 27.5 bits (58), Expect = 3.6
Identities = 17/88 (19%), Positives = 42/88 (47%)
Frame = +1
Query: 10 GSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHT 189
G ++ +ER ++++ ++ L + + T ++ ++ + L +++ T
Sbjct: 113 GLNRKLTNKMERNRSEMKQFKMEMMSSFNGLKQNMDTKMEEMMQLMRALIQDL------T 166
Query: 190 SQKLAPKLKAAYDDFVKHAEEVQKKVHE 273
SQKLA +++ F + E+QKK +
Sbjct: 167 SQKLAQNPESSKCSFPNYGLEIQKKFED 194
>Z81118-6|CAI46578.1| 1203|Caenorhabditis elegans Hypothetical protein
T10G3.5b protein.
Length = 1203
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +1
Query: 1 ARGGSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNM 180
+R + ++ +NLER + + + D+E++ + + + +Q A++ E ++L V
Sbjct: 847 SRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKTTQRVVE 905
Query: 181 DHTSQKLA 204
D K++
Sbjct: 906 DELVSKIS 913
>Z81118-5|CAB03330.2| 1205|Caenorhabditis elegans Hypothetical protein
T10G3.5a protein.
Length = 1205
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +1
Query: 1 ARGGSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNM 180
+R + ++ +NLER + + + D+E++ + + + +Q A++ E ++L V
Sbjct: 849 SRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKTTQRVVE 907
Query: 181 DHTSQKLA 204
D K++
Sbjct: 908 DELVSKIS 915
>AY032860-1|AAK52089.1| 1205|Caenorhabditis elegans EEA1 protein.
Length = 1205
Score = 27.1 bits (57), Expect = 4.8
Identities = 14/68 (20%), Positives = 35/68 (51%)
Frame = +1
Query: 1 ARGGSXQQARQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNM 180
+R + ++ +NLER + + + D+E++ + + + +Q A++ E ++L V
Sbjct: 849 SRRHAEEKGSENLERMITEKSRLEKDIEERESTI-QSIQEALETKDNEIESLKTTQRVVE 907
Query: 181 DHTSQKLA 204
D K++
Sbjct: 908 DELVSKIS 915
>Z93378-1|CAB07582.1| 303|Caenorhabditis elegans Hypothetical
protein F19H8.2 protein.
Length = 303
Score = 26.6 bits (56), Expect = 6.3
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 99 ITREAANRHPEHTKGEPEPGEGSRRQHGSHLTET 200
+T++ N+H +H K G G R++H ++ ET
Sbjct: 251 VTQKPPNQHKKHMK----KGHGMRKEHNHNVNET 280
>Z83246-2|CAB05841.1| 292|Caenorhabditis elegans Hypothetical
protein ZK795.3 protein.
Length = 292
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 28 RQNLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKE 165
R+N R RK+ + +K EK++ A++N K NL K+
Sbjct: 4 RENRLRREFIFRKSLEEKQKSLEEKREKIRNALENNTKIDYNLRKD 49
>Z75547-11|CAA99905.4| 394|Caenorhabditis elegans Hypothetical
protein R11D1.10a protein.
Length = 394
Score = 26.6 bits (56), Expect = 6.3
Identities = 17/83 (20%), Positives = 37/83 (44%)
Frame = +1
Query: 40 ERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKESQNLAKEVGVNMDHTSQKLAPKLKA 219
+R E ++ D + T + Q ++ + ++ + + KE+G D ++KL+
Sbjct: 276 QRVAETKKQEEHDAAELRTLMKSTRQKSL-DAIQWNDKITKEIGGFWDRRNEKLSVDEDE 334
Query: 220 AYDDFVKHAEEVQKKVHEAATKQ 288
D+ E +K +HEA +
Sbjct: 335 DEDEKSLDEETFKKILHEAENSE 357
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 26.6 bits (56), Expect = 6.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +3
Query: 84 ETSHRITREAANRHPEHTKGEPEPGEGSRRQHGS 185
E R T+E + HPEH + GEG R H S
Sbjct: 194 EHQKRSTQEVSG-HPEHHLVKRSGGEGGHRHHRS 226
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/66 (27%), Positives = 23/66 (34%)
Frame = +3
Query: 18 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTE 197
PT SP G RGSP R R+A P + P G + G +E
Sbjct: 417 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSE 476
Query: 198 TGAKTE 215
+ E
Sbjct: 477 SSESRE 482
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/66 (27%), Positives = 23/66 (34%)
Frame = +3
Query: 18 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTE 197
PT SP G RGSP R R+A P + P G + G +E
Sbjct: 438 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSE 497
Query: 198 TGAKTE 215
+ E
Sbjct: 498 SSESRE 503
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 26.6 bits (56), Expect = 6.3
Identities = 18/66 (27%), Positives = 23/66 (34%)
Frame = +3
Query: 18 PTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHGSHLTE 197
PT SP G RGSP R R+A P + P G + G +E
Sbjct: 423 PTGSPPTGRPPRGSPPTGSPPTGLPSRQKRQAPEDRPTGSPPTGSPPTGRPHRGGPGKSE 482
Query: 198 TGAKTE 215
+ E
Sbjct: 483 SSESRE 488
>Z92809-4|CAI06053.1| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 57 SPQGAPRRRETSHRITREAANRHPEHTKGEP 149
SP AP+ +E + T + +R P HT +P
Sbjct: 56 SPLQAPKAQEPAAAETTKKPSRQPHHTTAKP 86
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 26.2 bits (55), Expect = 8.4
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Frame = +1
Query: 34 NLERTVEDLRKAHPDVEKQATALHEKLQ----------TAIQNTLKESQNLAKEVGVNMD 183
N E + LRK H D + T E LQ + +Q L+ESQ+ A + V
Sbjct: 1197 NHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQH-ATDSEVRSR 1255
Query: 184 HTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 279
+K ++ Y + A+E +++ + A
Sbjct: 1256 QDLEKALKTIEVQYSELQTKADEQSRQLQDFA 1287
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 26.2 bits (55), Expect = 8.4
Identities = 23/92 (25%), Positives = 39/92 (42%), Gaps = 10/92 (10%)
Frame = +1
Query: 34 NLERTVEDLRKAHPDVEKQATALHEKLQ----------TAIQNTLKESQNLAKEVGVNMD 183
N E + LRK H D + T E LQ + +Q L+ESQ+ A + V
Sbjct: 1197 NHETAISSLRKRHGDSVAELTEQLETLQKLKAKSEAEKSKLQRDLEESQH-ATDSEVRSR 1255
Query: 184 HTSQKLAPKLKAAYDDFVKHAEEVQKKVHEAA 279
+K ++ Y + A+E +++ + A
Sbjct: 1256 QDLEKALKTIEVQYSELQTKADEQSRQLQDFA 1287
>U64857-15|AAC25858.1| 470|Caenorhabditis elegans Hypothetical
protein C37C3.1 protein.
Length = 470
Score = 26.2 bits (55), Expect = 8.4
Identities = 18/64 (28%), Positives = 25/64 (39%)
Frame = +3
Query: 3 TRRKXPTSSPELGAHSRGSPQGAPRRRETSHRITREAANRHPEHTKGEPEPGEGSRRQHG 182
+RR TS G HSR + PR+R R + +R P S+ +
Sbjct: 332 SRRSESTSRRRSGRHSRSRSRSPPRKRPV-RRSRSRSRSRTPNRNWTRARSRTRSQAKSS 390
Query: 183 SHLT 194
S LT
Sbjct: 391 STLT 394
>U58753-1|AAC24437.2| 814|Caenorhabditis elegans Hypothetical
protein W03B1.2 protein.
Length = 814
Score = 26.2 bits (55), Expect = 8.4
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = -1
Query: 170 PTSFARFWLSFSVFWMAVCSFSCNAV-ACFSTSGCALRRSSTVRSKFWR 27
P F+ F++ FW + C F + + TSGC S+ + S +WR
Sbjct: 627 PPPFSLFYVVLR-FWYS-CFFKYIVIFTTWLTSGCCKCSSTAISSLYWR 673
>AM748822-1|CAO72176.1| 591|Caenorhabditis elegans hexosaminidase
protein.
Length = 591
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 57 SPQGAPRRRETSHRITREAANRHPEHTKGEP 149
SP AP+ +E + T + +R P HT +P
Sbjct: 56 SPLQAPKAQEPAAAETTKKPSRQPHHTTAKP 86
>AL023839-4|CAA19506.2| 615|Caenorhabditis elegans Hypothetical
protein Y39A1C.4 protein.
Length = 615
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 57 SPQGAPRRRETSHRITREAANRHPEHTKGEP 149
SP AP+ +E + T + +R P HT +P
Sbjct: 56 SPLQAPKAQEPAAAETTKKPSRQPHHTTAKP 86
>AF040655-12|AAB95039.1| 507|Caenorhabditis elegans Hypothetical
protein T24E12.1 protein.
Length = 507
Score = 26.2 bits (55), Expect = 8.4
Identities = 13/27 (48%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
Frame = -1
Query: 182 SMLTPTSFARFWLSFS--VFWMAVCSF 108
S++ P F R L S VFW AVCS+
Sbjct: 296 SLVNPAQFLRQTLCCSACVFWRAVCSY 322
>AF039716-9|AAB96734.2| 548|Caenorhabditis elegans Hypothetical
protein W03G9.7 protein.
Length = 548
Score = 26.2 bits (55), Expect = 8.4
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 1/82 (1%)
Frame = +1
Query: 34 NLERTVEDLRKAHPDVEKQATALHEKLQTAIQNTLKES-QNLAKEVGVNMDHTSQKLAPK 210
NL+ TVE L +++KQ E+ +T ++N + S ++ K+ G D ++
Sbjct: 109 NLKNTVEQLEAVLKELKKQT----EREKTDLKNIEQPSVRDYLKQQGQWDDRYLKE---- 160
Query: 211 LKAAYDDFVKHAEEVQKKVHEA 276
KA Y+D + E VQK+++ A
Sbjct: 161 -KAEYEDAMVRQETVQKELNIA 181
>AF025452-3|AAB70939.2| 198|Caenorhabditis elegans Hypothetical
protein B0454.5 protein.
Length = 198
Score = 26.2 bits (55), Expect = 8.4
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 164 SFARFWLSFSVFWMAVCSFSC 102
+ A F+L FS+FW+ + F C
Sbjct: 171 NIATFFLFFSIFWLFMSVFCC 191
>AF016665-6|AAL02468.1| 655|Caenorhabditis elegans Hypothetical
protein C49D10.10 protein.
Length = 655
Score = 26.2 bits (55), Expect = 8.4
Identities = 11/30 (36%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
Frame = +1
Query: 118 TAIQNTLKESQNLAKEV-GVNMDHTSQKLA 204
TAI+N L+E +NL +E+ + D+ +++L+
Sbjct: 245 TAIENDLREYENLQRELKSITSDYPTEELS 274
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,164,831
Number of Sequences: 27780
Number of extensions: 151432
Number of successful extensions: 772
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 598330768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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