Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C14
(290 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q0QHL0 Cluster: Isocitrate dehydrogenase (NAD+) 2; n=1;... 35 0.30
UniRef50_Q567A6 Cluster: Isocitrate dehydrogenase 3 (NAD+) gamma... 32 2.1
UniRef50_Q1EPG8 Cluster: Putative uncharacterized protein; n=1; ... 32 2.1
UniRef50_Q149M9 Cluster: NWD1 protein; n=16; Eutheria|Rep: NWD1 ... 31 4.9
UniRef50_UPI0000E21AAB Cluster: PREDICTED: hypothetical protein;... 31 6.5
UniRef50_A1SM34 Cluster: 3-isopropylmalate dehydrogenase; n=1; N... 31 6.5
UniRef50_A7SJV9 Cluster: Predicted protein; n=1; Nematostella ve... 31 6.5
UniRef50_A2FZ01 Cluster: TKL family protein kinase; n=1; Trichom... 31 6.5
UniRef50_Q8N9N5 Cluster: Protein BANP; n=40; Euteleostomi|Rep: P... 31 6.5
UniRef50_UPI000155CCB4 Cluster: PREDICTED: similar to interferon... 30 8.5
UniRef50_A6T3U2 Cluster: Isocitrate dehydrogenase; n=68; Bacteri... 30 8.5
UniRef50_Q2VF40 Cluster: Isocitrate dehydrogenase 3 gamma subuni... 30 8.5
UniRef50_Q2Q9C5 Cluster: Isocitrate dehydrogenase 3 gamma; n=8; ... 30 8.5
UniRef50_Q9FMT1 Cluster: 3-isopropylmalate dehydrogenase 3, chlo... 30 8.5
UniRef50_P51553 Cluster: Isocitrate dehydrogenase [NAD] subunit ... 30 8.5
>UniRef50_Q0QHL0 Cluster: Isocitrate dehydrogenase (NAD+) 2; n=1;
Glossina morsitans morsitans|Rep: Isocitrate
dehydrogenase (NAD+) 2 - Glossina morsitans morsitans
(Savannah tsetse fly)
Length = 372
Score = 35.1 bits (77), Expect = 0.30
Identities = 20/47 (42%), Positives = 28/47 (59%)
Frame = +1
Query: 148 KGVHTSSVNTERNVRFAAPIGSLCNPMRQKEGRIKCTLIPGDGVGPE 288
+G+ TS+V R++ A + + +P R CTLIPGDGVGPE
Sbjct: 12 QGLQTSTV---RSIHATATLNT--DPGALGGNRTTCTLIPGDGVGPE 53
>UniRef50_Q567A6 Cluster: Isocitrate dehydrogenase 3 (NAD+) gamma;
n=1; Danio rerio|Rep: Isocitrate dehydrogenase 3 (NAD+)
gamma - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 289
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = +1
Query: 208 GSLCNPMRQKEGRIKCTLIPGDGVGPE 288
G + P + GR TLIPGDG+GPE
Sbjct: 38 GRIIPPPAKYGGRHTVTLIPGDGIGPE 64
>UniRef50_Q1EPG8 Cluster: Putative uncharacterized protein; n=1;
Musa acuminata|Rep: Putative uncharacterized protein -
Musa acuminata (Banana)
Length = 209
Score = 32.3 bits (70), Expect = 2.1
Identities = 15/45 (33%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 106 NVFRALVQGSQHIGKGVHTSSVNTERNV-RFAAPIGSLCNPMRQK 237
N+ RAL +G+Q +G H+S + +R V R+ +G + P ++K
Sbjct: 67 NLARALTRGAQRLGLSKHSSGTSLKRLVLRYCETLGKINRPRQKK 111
>UniRef50_Q149M9 Cluster: NWD1 protein; n=16; Eutheria|Rep: NWD1
protein - Homo sapiens (Human)
Length = 1358
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -1
Query: 206 MGAAKRTFLSVFTELVWTPLPMCCDP 129
+ AA+RT V T+L+W LP C +P
Sbjct: 302 LAAARRTLSPVHTDLLWASLPECGNP 327
>UniRef50_UPI0000E21AAB Cluster: PREDICTED: hypothetical protein;
n=1; Pan troglodytes|Rep: PREDICTED: hypothetical
protein - Pan troglodytes
Length = 338
Score = 30.7 bits (66), Expect = 6.5
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = -1
Query: 290 NSGPTPSPGIRVHLIRPSFCRIGLQSEPMGAAKRTFLSVFTELVWTPLPMCCDPCTRARK 111
+SG P + HL R S+CR + + K L++F ++ LP+C +P ++ K
Sbjct: 190 SSGCINRPPPKSHLTRVSWCRADHKECQLSLFK--ILTLFGAML---LPVCRNPLPKSPK 244
Query: 110 TFRLISD 90
FR+I +
Sbjct: 245 VFRIIQN 251
>UniRef50_A1SM34 Cluster: 3-isopropylmalate dehydrogenase; n=1;
Nocardioides sp. JS614|Rep: 3-isopropylmalate
dehydrogenase - Nocardioides sp. (strain BAA-499 /
JS614)
Length = 478
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +1
Query: 175 TERNVRFAAPIGSLCNPMRQKEGRIKCTLIPGDGVGPE 288
T + R +G + G ++ +IPGDG+GPE
Sbjct: 108 TAASARTTTSLGRMTTTHTGTSGSLRLAVIPGDGIGPE 145
>UniRef50_A7SJV9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 394
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P + GR TLIPGDG+GPE
Sbjct: 43 PPARYGGRNTVTLIPGDGIGPE 64
>UniRef50_A2FZ01 Cluster: TKL family protein kinase; n=1;
Trichomonas vaginalis G3|Rep: TKL family protein kinase
- Trichomonas vaginalis G3
Length = 769
Score = 30.7 bits (66), Expect = 6.5
Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 3/68 (4%)
Frame = -1
Query: 251 LIRPSFCRIGLQSEPMGAAKRTFLSVFTEL---VWTPLPMCCDPCTRARKTFRLISDILK 81
+IR FC L SE GAAK + +VFT L P P + IS +LK
Sbjct: 485 IIRQIFCTF-LHSEDAGAAKAAYRAVFTLLDPKYQLPFPQIISDVGDTDLSECAISLLLK 543
Query: 80 ICQIPLEK 57
I P+ K
Sbjct: 544 ITNFPVNK 551
>UniRef50_Q8N9N5 Cluster: Protein BANP; n=40; Euteleostomi|Rep:
Protein BANP - Homo sapiens (Human)
Length = 545
Score = 30.7 bits (66), Expect = 6.5
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +1
Query: 130 GSQHIGKGVHTSSVNTERNVRFAAPIGSLCNPMRQKEGRIKCTLIPGD 273
GSQ IG V ++N+E + +G NP E R++C +IP D
Sbjct: 220 GSQSIGSNVTLITLNSEEDYPNGTWLGDENNP----EMRVRCAIIPSD 263
>UniRef50_UPI000155CCB4 Cluster: PREDICTED: similar to interferon
receptor type 1; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to interferon receptor type 1 -
Ornithorhynchus anatinus
Length = 730
Score = 30.3 bits (65), Expect = 8.5
Identities = 16/50 (32%), Positives = 22/50 (44%)
Frame = -1
Query: 287 SGPTPSPGIRVHLIRPSFCRIGLQSEPMGAAKRTFLSVFTELVWTPLPMC 138
S P+ IRVH +R + G + +G + V E W PLP C
Sbjct: 246 SAVNPARDIRVHFVRSLYLSGGREIPQVGGMIPDKVVVVEEDTWKPLPGC 295
>UniRef50_A6T3U2 Cluster: Isocitrate dehydrogenase; n=68;
Bacteria|Rep: Isocitrate dehydrogenase -
Janthinobacterium sp. (strain Marseille) (Minibacterium
massiliensis)
Length = 349
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P + +I TLIPGDG+GPE
Sbjct: 2 PNSSTQQQIPVTLIPGDGIGPE 23
>UniRef50_Q2VF40 Cluster: Isocitrate dehydrogenase 3 gamma subunit;
n=1; Pan troglodytes|Rep: Isocitrate dehydrogenase 3
gamma subunit - Pan troglodytes (Chimpanzee)
Length = 165
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P + GR T+IPGDG+GPE
Sbjct: 105 PSAKYGGRHTVTMIPGDGIGPE 126
>UniRef50_Q2Q9C5 Cluster: Isocitrate dehydrogenase 3 gamma; n=8;
Eutheria|Rep: Isocitrate dehydrogenase 3 gamma - Homo
sapiens (Human)
Length = 88
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P + GR T+IPGDG+GPE
Sbjct: 20 PSAKYGGRHTVTMIPGDGIGPE 41
>UniRef50_Q9FMT1 Cluster: 3-isopropylmalate dehydrogenase 3,
chloroplast precursor; n=186; cellular organisms|Rep:
3-isopropylmalate dehydrogenase 3, chloroplast precursor
- Arabidopsis thaliana (Mouse-ear cress)
Length = 409
Score = 30.3 bits (65), Expect = 8.5
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 190 RFAAPIGSLCNPMRQKEGRIKCTLIPGDGVGPE 288
+F AP C + R L+PGDG+GPE
Sbjct: 28 QFRAPYRIRCAAASPGKKRYNIALLPGDGIGPE 60
>UniRef50_P51553 Cluster: Isocitrate dehydrogenase [NAD] subunit
gamma, mitochondrial precursor (EC 1.1.1.41) (Isocitric
dehydrogenase) (NAD(+)-specific ICDH); n=50;
Deuterostomia|Rep: Isocitrate dehydrogenase [NAD]
subunit gamma, mitochondrial precursor (EC 1.1.1.41)
(Isocitric dehydrogenase) (NAD(+)-specific ICDH) - Homo
sapiens (Human)
Length = 393
Score = 30.3 bits (65), Expect = 8.5
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P + GR T+IPGDG+GPE
Sbjct: 47 PSAKYGGRHTVTMIPGDGIGPE 68
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 322,942,555
Number of Sequences: 1657284
Number of extensions: 6042246
Number of successful extensions: 13258
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 12971
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13256
length of database: 575,637,011
effective HSP length: 74
effective length of database: 452,997,995
effective search space used: 9965955890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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