Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C14
(290 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical pr... 33 0.026
Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical pr... 31 0.10
Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical pr... 29 0.73
Z32683-9|CAA83628.1| 253|Caenorhabditis elegans Hypothetical pr... 28 1.3
AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical ... 27 2.2
Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical pr... 26 5.2
Z96047-3|CAB09412.1| 207|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical pr... 25 6.8
Z29117-10|CAA82375.2| 182|Caenorhabditis elegans Hypothetical p... 25 6.8
AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical ... 25 6.8
AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical ... 25 6.8
AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical ... 25 6.8
AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B prote... 25 6.8
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 25 6.8
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 25 6.8
AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B prote... 25 6.8
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 25 6.8
AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed ... 25 6.8
Z68299-4|CAD60422.2| 367|Caenorhabditis elegans Hypothetical pr... 25 9.1
AF003739-7|AAB58068.1| 339|Caenorhabditis elegans Hypothetical ... 25 9.1
>Z46242-1|CAA86325.2| 396|Caenorhabditis elegans Hypothetical
protein F35G12.2 protein.
Length = 396
Score = 33.5 bits (73), Expect = 0.026
Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = +1
Query: 97 ISRNVFRALVQGSQHIGKGVHTSSVNTERNVRFAAPI-GSLCNPMRQKEGRIKCTLIPGD 273
+S NV ++ S+++ + ++ +RF +P+ + + + GR T++PGD
Sbjct: 1 MSSNVLGHTLRSSKNVVQKAFVATSPNSDMLRFRSPVLQTNTTKLARYGGRHNVTVLPGD 60
Query: 274 GVGPE 288
G+GPE
Sbjct: 61 GIGPE 65
>Z81046-1|CAB02822.1| 379|Caenorhabditis elegans Hypothetical
protein C37E2.1 protein.
Length = 379
Score = 31.5 bits (68), Expect = 0.10
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P + ++K T+IPGDGVGPE
Sbjct: 35 PPTELNQKLKVTIIPGDGVGPE 56
>Z79755-1|CAB02111.2| 358|Caenorhabditis elegans Hypothetical
protein F43G9.1 protein.
Length = 358
Score = 28.7 bits (61), Expect = 0.73
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Frame = +1
Query: 226 MRQKEGRIK-CTLIPGDGVGPE 288
+R G ++ TLIPGDG+GPE
Sbjct: 17 IRYSSGDVRRVTLIPGDGIGPE 38
>Z32683-9|CAA83628.1| 253|Caenorhabditis elegans Hypothetical
protein R07E5.15 protein.
Length = 253
Score = 27.9 bits (59), Expect = 1.3
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 160 TSSVNTERNVRFAAPIGSL 216
T++VN ER+V AAPIGS+
Sbjct: 153 TTAVNIERDVSTAAPIGSM 171
>AC006610-5|AAK85453.1| 373|Caenorhabditis elegans Hypothetical
protein C30F12.7 protein.
Length = 373
Score = 27.1 bits (57), Expect = 2.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 223 PMRQKEGRIKCTLIPGDGVGPE 288
P+ + GR +PGDG+GPE
Sbjct: 28 PLAKYGGRHTVCALPGDGIGPE 49
>Z79639-1|CAB01916.1| 2948|Caenorhabditis elegans Hypothetical protein
F54E4.1 protein.
Length = 2948
Score = 25.8 bits (54), Expect = 5.2
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 37 ISCKN*PFSKGIWQILRMSLISRNVFR 117
+SC+N + WQ+LR++LI + + R
Sbjct: 2457 LSCENAAPASFAWQLLRLALIQQQLHR 2483
>Z96047-3|CAB09412.1| 207|Caenorhabditis elegans Hypothetical
protein DY3.3 protein.
Length = 207
Score = 25.4 bits (53), Expect = 6.8
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = -3
Query: 267 RNKGTLNTTFFLSHWVAK*TNGGSKTYISLSVYRTCMDSLAYVL*SLYKGTKNIS 103
R NT S+W+ + N K + L++ +DSL L + K + S
Sbjct: 76 RRMSKANTLLLASNWIKQLANANHKLQMELNMANAKIDSLMVQLKKVEKPSSKCS 130
>Z93398-7|CAD90188.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z93398-6|CAD90187.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z93398-4|CAH04743.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z93398-3|CAH04742.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1016 LLEINMVLKVSKLGAQNEHFSQ 1037
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1098 LLEINMVLKVSKLGAQNEHFSQ 1119
>Z92788-7|CAD90177.2| 4955|Caenorhabditis elegans Hypothetical protein
ZK1151.1c protein.
Length = 4955
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z92788-6|CAD90176.2| 4944|Caenorhabditis elegans Hypothetical protein
ZK1151.1b protein.
Length = 4944
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z92788-4|CAH04711.1| 4410|Caenorhabditis elegans Hypothetical protein
ZK1151.1g protein.
Length = 4410
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z92788-3|CAH04710.1| 3322|Caenorhabditis elegans Hypothetical protein
ZK1151.1f protein.
Length = 3322
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1016 LLEINMVLKVSKLGAQNEHFSQ 1037
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1098 LLEINMVLKVSKLGAQNEHFSQ 1119
>Z78419-3|CAB01701.2| 1632|Caenorhabditis elegans Hypothetical protein
F26A3.3 protein.
Length = 1632
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 200 AAKRTFLSVFTELVWTPLPMCCDPCTRARKTFR 102
AA +T+ +V L + LP+ DP T R R
Sbjct: 1495 AALKTYYNVLFNLRFEELPVSTDPTTTVRSIIR 1527
>Z29117-10|CAA82375.2| 182|Caenorhabditis elegans Hypothetical
protein C48B4.10 protein.
Length = 182
Score = 25.4 bits (53), Expect = 6.8
Identities = 9/25 (36%), Positives = 15/25 (60%)
Frame = -2
Query: 205 WGQQNVHFSQCLPNLYGLPCLCVVI 131
+G +++ F+QC P Y LC+ I
Sbjct: 108 FGDKDITFNQCSPFAYAFIFLCIYI 132
>AL031637-4|CAD90184.2| 4955|Caenorhabditis elegans Hypothetical
protein ZK1151.1c protein.
Length = 4955
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AL031637-3|CAD90183.2| 4944|Caenorhabditis elegans Hypothetical
protein ZK1151.1b protein.
Length = 4944
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AL031637-2|CAH04759.1| 4410|Caenorhabditis elegans Hypothetical
protein ZK1151.1g protein.
Length = 4410
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AJ505905-1|CAD44516.1| 3522|Caenorhabditis elegans VAB-10B protein
protein.
Length = 3522
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AJ505816-1|CAD44324.1| 4944|Caenorhabditis elegans VAB-10B protein
protein.
Length = 4944
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 25.4 bits (53), Expect = 6.8
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -2
Query: 241 LLSVALGCKVNQWGQQNVHFSQ 176
LL + + KV++ G QN HFSQ
Sbjct: 1129 LLEINMVLKVSKLGAQNEHFSQ 1150
>AF159143-1|AAF80367.1| 1632|Caenorhabditis elegans RNA-directed RNA
polymerase relatedEGO-1 protein.
Length = 1632
Score = 25.4 bits (53), Expect = 6.8
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = -1
Query: 200 AAKRTFLSVFTELVWTPLPMCCDPCTRARKTFR 102
AA +T+ +V L + LP+ DP T R R
Sbjct: 1495 AALKTYYNVLFNLRFEELPVSTDPTTTVRSIIR 1527
>Z68299-4|CAD60422.2| 367|Caenorhabditis elegans Hypothetical
protein T04B2.7 protein.
Length = 367
Score = 25.0 bits (52), Expect = 9.1
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Frame = +1
Query: 61 SKGIWQILRM-SLISRNVFRALVQGSQHIGKGVHTSSVNTERNVRFAAPIG-SLCNPMRQ 234
S + Q++++ SLIS+ + V+ Q + +G S ++ F I ++CN + Q
Sbjct: 234 SARVLQLIKLESLISKEI---PVEADQELLRGFCRSGDQEDKAEVFIEKITLAICNAIVQ 290
Query: 235 KEGRIKCTLIPGD 273
K I+ ++PG+
Sbjct: 291 KNEFIRQVVVPGE 303
>AF003739-7|AAB58068.1| 339|Caenorhabditis elegans Hypothetical
protein M01D7.1 protein.
Length = 339
Score = 25.0 bits (52), Expect = 9.1
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = -3
Query: 81 NLPNTFRKRLIFTRNIFGPSLRCKASC 1
NLP K +I+ +I+ ++CK SC
Sbjct: 24 NLPFVALKNVIYQMDIYSVYVQCKNSC 50
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,591,923
Number of Sequences: 27780
Number of extensions: 154244
Number of successful extensions: 376
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 365
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 376
length of database: 12,740,198
effective HSP length: 70
effective length of database: 10,795,598
effective search space used: 280685548
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -