Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C13
(405 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18 pro... 84 2e-16
BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18 p... 84 2e-16
BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18 p... 84 2e-16
BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18 p... 84 2e-16
AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18 ... 84 2e-16
AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18 p... 84 2e-16
AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18 ... 84 2e-16
AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18 ... 84 2e-16
AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18 ... 84 2e-16
AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18 p... 84 2e-16
AL031228-2|CAI95617.1| 82|Homo sapiens ribosomal protein S18 p... 84 2e-16
BC071678-1|AAH71678.1| 74|Homo sapiens LOC645958 protein protein. 75 7e-14
BC013046-1|AAH13046.1| 424|Homo sapiens solute carrier family 3... 29 4.5
BC010307-1|AAH10307.1| 424|Homo sapiens solute carrier family 3... 29 4.5
BC005207-1|AAH05207.1| 424|Homo sapiens solute carrier family 3... 29 4.5
AY358994-1|AAQ89353.1| 424|Homo sapiens SLC35A5 protein. 29 4.5
AK000737-1|BAA91350.1| 424|Homo sapiens protein ( Homo sapiens ... 29 4.5
>X69150-1|CAB56794.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>BC106063-1|AAI06064.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>BC101788-1|AAI01789.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>BC101786-1|AAI01787.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL844527-17|CAI41848.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL713971-5|CAI17656.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL662827-19|CAI17530.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL662820-19|CAI18127.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL645940-16|CAI18076.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL031228-3|CAA20231.1| 152|Homo sapiens ribosomal protein S18
protein.
Length = 152
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 72 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 131
Score = 72.5 bits (170), Expect = 5e-13
Identities = 31/46 (67%), Positives = 36/46 (78%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
+VL KADIDL KRAGE TE+E +++TIM NP QY IPDWFLN K
Sbjct: 43 VVLRKADIDLTKRAGELTEDEVERVITIMQNPRQYKIPDWFLNRQK 88
>AL031228-2|CAI95617.1| 82|Homo sapiens ribosomal protein S18
protein.
Length = 82
Score = 83.8 bits (198), Expect = 2e-16
Identities = 37/60 (61%), Positives = 45/60 (75%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P + F RQKD+ DGKYS + ++ L +KLREDLERLKKIRAHRG+RH+WGLRV
Sbjct: 2 QNPRQYKIPDWFLNRQKDVKDGKYSQVLANGLDNKLREDLERLKKIRAHRGLRHFWGLRV 61
Score = 34.3 bits (75), Expect = 0.16
Identities = 13/18 (72%), Positives = 13/18 (72%)
Frame = -2
Query: 320 MSNPSQYTIPDWFLNTTK 267
M NP QY IPDWFLN K
Sbjct: 1 MQNPRQYKIPDWFLNRQK 18
>BC071678-1|AAH71678.1| 74|Homo sapiens LOC645958 protein protein.
Length = 74
Score = 75.4 bits (177), Expect = 7e-14
Identities = 33/49 (67%), Positives = 40/49 (81%)
Frame = -3
Query: 283 FSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
F RQKD+ DGKYS + ++ L +KL EDLERLKKIRA RG+RH+WGLRV
Sbjct: 5 FLNRQKDVKDGKYSQVLANGLDNKLCEDLERLKKIRARRGLRHFWGLRV 53
>BC013046-1|AAH13046.1| 424|Homo sapiens solute carrier family 35,
member A5 protein.
Length = 424
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 180 IFFSLSKSSRSLECKL---EEVKWLYLPSTISFCRVEKPVWYCVL 305
IF +LS SSR L K EE K+ YLP+T++ C + +CVL
Sbjct: 25 IFIALS-SSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVL 68
>BC010307-1|AAH10307.1| 424|Homo sapiens solute carrier family 35,
member A5 protein.
Length = 424
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 180 IFFSLSKSSRSLECKL---EEVKWLYLPSTISFCRVEKPVWYCVL 305
IF +LS SSR L K EE K+ YLP+T++ C + +CVL
Sbjct: 25 IFIALS-SSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVL 68
>BC005207-1|AAH05207.1| 424|Homo sapiens solute carrier family 35,
member A5 protein.
Length = 424
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 180 IFFSLSKSSRSLECKL---EEVKWLYLPSTISFCRVEKPVWYCVL 305
IF +LS SSR L K EE K+ YLP+T++ C + +CVL
Sbjct: 25 IFIALS-SSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVL 68
>AY358994-1|AAQ89353.1| 424|Homo sapiens SLC35A5 protein.
Length = 424
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 180 IFFSLSKSSRSLECKL---EEVKWLYLPSTISFCRVEKPVWYCVL 305
IF +LS SSR L K EE K+ YLP+T++ C + +CVL
Sbjct: 25 IFIALS-SSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVL 68
>AK000737-1|BAA91350.1| 424|Homo sapiens protein ( Homo sapiens
cDNA FLJ20730 fis, clone HEP10359. ).
Length = 424
Score = 29.5 bits (63), Expect = 4.5
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Frame = +3
Query: 180 IFFSLSKSSRSLECKL---EEVKWLYLPSTISFCRVEKPVWYCVL 305
IF +LS SSR L K EE K+ YLP+T++ C + +CVL
Sbjct: 25 IFIALS-SSRILLVKYSANEENKYDYLPTTVNVCSELVKLVFCVL 68
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 48,454,633
Number of Sequences: 237096
Number of extensions: 948611
Number of successful extensions: 2139
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 2074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2139
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2985693880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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