Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C13
(405 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal prot... 91 7e-19
BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p pro... 91 7e-19
AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p pro... 91 7e-19
AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB... 91 7e-19
AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA... 91 7e-19
BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p pro... 64 9e-11
K02320-1|AAA28735.1| 353|Drosophila melanogaster protein ( D. m... 29 3.1
K02315-1|AAA28733.1| 373|Drosophila melanogaster protein ( D. m... 29 3.1
BT029277-1|ABK30914.1| 373|Drosophila melanogaster IP09935p pro... 29 3.1
BT023714-1|AAY85114.1| 373|Drosophila melanogaster GH24720p pro... 29 3.1
BT010221-1|AAQ23539.1| 373|Drosophila melanogaster RH01460p pro... 29 3.1
AE014297-2724|AAF55712.1| 373|Drosophila melanogaster CG4550-PA... 29 3.1
>L22959-1|AAA28870.1| 152|Drosophila melanogaster ribosomal protein
S18 protein.
Length = 152
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -3
Query: 310 PANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
P + F RQKDI+DGKY LTSSNL SKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74 PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
IVL KAD+DL KRAGECTEEE K+VTI+SNP QY +P+WFLN K
Sbjct: 43 IVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQK 88
>BT024929-1|ABE01159.1| 152|Drosophila melanogaster IP16603p
protein.
Length = 152
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -3
Query: 310 PANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
P + F RQKDI+DGKY LTSSNL SKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74 PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
IVL KAD+DL KRAGECTEEE K+VTI+SNP QY +P+WFLN K
Sbjct: 43 IVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQK 88
>AY118434-1|AAM48463.1| 152|Drosophila melanogaster RH43343p
protein.
Length = 152
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -3
Query: 310 PANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
P + F RQKDI+DGKY LTSSNL SKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74 PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
IVL KAD+DL KRAGECTEEE K+VTI+SNP QY +P+WFLN K
Sbjct: 43 IVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQK 88
>AE013599-2985|AAM68401.1| 152|Drosophila melanogaster CG8900-PB,
isoform B protein.
Length = 152
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -3
Query: 310 PANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
P + F RQKDI+DGKY LTSSNL SKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74 PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
IVL KAD+DL KRAGECTEEE K+VTI+SNP QY +P+WFLN K
Sbjct: 43 IVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQK 88
>AE013599-2984|AAF57491.1| 152|Drosophila melanogaster CG8900-PA,
isoform A protein.
Length = 152
Score = 90.6 bits (215), Expect = 7e-19
Identities = 41/58 (70%), Positives = 46/58 (79%)
Frame = -3
Query: 310 PANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
P + F RQKDI+DGKY LTSSNL SKLR+DLERLKKIR+HRG+RHYWGLRV
Sbjct: 74 PLQYKVPNWFLNRQKDIIDGKYWQLTSSNLDSKLRDDLERLKKIRSHRGLRHYWGLRV 131
Score = 76.2 bits (179), Expect = 2e-14
Identities = 33/46 (71%), Positives = 38/46 (82%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
IVL KAD+DL KRAGECTEEE K+VTI+SNP QY +P+WFLN K
Sbjct: 43 IVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVPNWFLNRQK 88
>BT022499-1|AAY54915.1| 246|Drosophila melanogaster IP07925p
protein.
Length = 246
Score = 63.7 bits (148), Expect = 9e-11
Identities = 28/38 (73%), Positives = 32/38 (84%)
Frame = -2
Query: 404 IVLTKADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIP 291
IVL KAD+DL KRAGECTEEE K+VTI+SNP QY +P
Sbjct: 11 IVLKKADVDLTKRAGECTEEEVDKVVTIISNPLQYKVP 48
>K02320-1|AAA28735.1| 353|Drosophila melanogaster protein ( D.
melanogaster opsingene, exon 5. ).
Length = 353
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 292 GIVYWLGFDMIVTIFAASSSVHSPARL 372
G++ W G +++ IFA + S+ +PA L
Sbjct: 61 GMISWCGNGVVIYIFATTKSLRTPANL 87
>K02315-1|AAA28733.1| 373|Drosophila melanogaster protein ( D.
melanogaster opsin(ninaE) gene, complete cds. ).
Length = 373
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 292 GIVYWLGFDMIVTIFAASSSVHSPARL 372
G++ W G +++ IFA + S+ +PA L
Sbjct: 61 GMISWCGNGVVIYIFATTKSLRTPANL 87
>BT029277-1|ABK30914.1| 373|Drosophila melanogaster IP09935p
protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 292 GIVYWLGFDMIVTIFAASSSVHSPARL 372
G++ W G +++ IFA + S+ +PA L
Sbjct: 61 GMISWCGNGVVIYIFATTKSLRTPANL 87
>BT023714-1|AAY85114.1| 373|Drosophila melanogaster GH24720p
protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 292 GIVYWLGFDMIVTIFAASSSVHSPARL 372
G++ W G +++ IFA + S+ +PA L
Sbjct: 61 GMISWCGNGVVIYIFATTKSLRTPANL 87
>BT010221-1|AAQ23539.1| 373|Drosophila melanogaster RH01460p
protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 292 GIVYWLGFDMIVTIFAASSSVHSPARL 372
G++ W G +++ IFA + S+ +PA L
Sbjct: 61 GMISWCGNGVVIYIFATTKSLRTPANL 87
>AE014297-2724|AAF55712.1| 373|Drosophila melanogaster CG4550-PA
protein.
Length = 373
Score = 28.7 bits (61), Expect = 3.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +1
Query: 292 GIVYWLGFDMIVTIFAASSSVHSPARL 372
G++ W G +++ IFA + S+ +PA L
Sbjct: 61 GMISWCGNGVVIYIFATTKSLRTPANL 87
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,731,911
Number of Sequences: 53049
Number of extensions: 280242
Number of successful extensions: 875
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 865
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 875
length of database: 24,988,368
effective HSP length: 77
effective length of database: 20,903,595
effective search space used: 1191504915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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