Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C13
(405 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical p... 79 9e-16
AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical ... 32 0.18
Z69662-3|CAA93502.1| 449|Caenorhabditis elegans Hypothetical pr... 31 0.31
Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical p... 28 2.9
DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagella... 28 2.9
U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated p... 27 5.1
U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin pr... 27 5.1
U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein. 27 5.1
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 9.0
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 26 9.0
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 26 9.0
>Z99281-11|CAB16517.1| 154|Caenorhabditis elegans Hypothetical
protein Y57G11C.16 protein.
Length = 154
Score = 79.4 bits (187), Expect = 9e-16
Identities = 36/60 (60%), Positives = 43/60 (71%)
Frame = -3
Query: 316 QTPANTQYQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGLRV 137
Q P+ + F RQKDI DGK L S+ + +KLREDLER+KKIR HRG+RHYWGLRV
Sbjct: 72 QNPSQYKIPNWFLNRQKDIKDGKTGQLLSTAVDNKLREDLERMKKIRLHRGLRHYWGLRV 131
Score = 68.5 bits (160), Expect = 2e-12
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -2
Query: 392 KADIDLDKRAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTK 267
KAD+D++KRAGE TEE+ KIVTIM NPSQY IP+WFLN K
Sbjct: 47 KADVDVNKRAGELTEEDFDKIVTIMQNPSQYKIPNWFLNRQK 88
>AC006603-7|ABB51201.1| 576|Caenorhabditis elegans Hypothetical
protein B0524.7 protein.
Length = 576
Score = 31.9 bits (69), Expect = 0.18
Identities = 12/35 (34%), Positives = 22/35 (62%)
Frame = -3
Query: 295 YQTGFSTRQKDIVDGKYSHLTSSNLHSKLREDLER 191
Y+ +S RQ+D++D + H N+ S ++D+ER
Sbjct: 153 YEEAYSLRQQDVIDEFWRHQCLKNIESFEKDDVER 187
>Z69662-3|CAA93502.1| 449|Caenorhabditis elegans Hypothetical
protein F56D5.3 protein.
Length = 449
Score = 31.1 bits (67), Expect = 0.31
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +1
Query: 82 WTHQQFYLFCLWS*CVDHGHADPSSDAYPYEHGSSSAFPNLHEAWSVNWKK 234
W H QF + + CVD + + + +A ++ G SS NL W+ K+
Sbjct: 65 WGHGQFGMIITGNVCVDPINLEAAGNAIIFKEGESSKRRNLFSQWAQKIKQ 115
>Z82266-11|CAB05177.4| 1192|Caenorhabditis elegans Hypothetical
protein F23B2.4 protein.
Length = 1192
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 262 IVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGL 143
I+D + L H R DLE +KK+ A+ +H +GL
Sbjct: 746 IIDNDWLELAIEISHKIDRSDLETMKKLSAYFIRKHEFGL 785
>DQ360810-1|ABC88647.1| 1192|Caenorhabditis elegans intraflagellar
transport protein protein.
Length = 1192
Score = 27.9 bits (59), Expect = 2.9
Identities = 14/40 (35%), Positives = 21/40 (52%)
Frame = -3
Query: 262 IVDGKYSHLTSSNLHSKLREDLERLKKIRAHRGMRHYWGL 143
I+D + L H R DLE +KK+ A+ +H +GL
Sbjct: 746 IIDNDWLELAIEISHKIDRSDLETMKKLSAYFIRKHEFGL 785
>U50071-2|AAA93447.2| 6994|Caenorhabditis elegans Uncoordinated
protein 44, isoform f protein.
Length = 6994
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 253 GKYSHLTSSNLHSKLREDLERLKKIRAHRG 164
GKY H +S NL ++ ERL+K RG
Sbjct: 6664 GKYRHQSSDNLSLTSLQEFERLEKEVGARG 6693
>U39847-1|AAB41827.1| 6994|Caenorhabditis elegans AO13 ankyrin
protein.
Length = 6994
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 253 GKYSHLTSSNLHSKLREDLERLKKIRAHRG 164
GKY H +S NL ++ ERL+K RG
Sbjct: 6664 GKYRHQSSDNLSLTSLQEFERLEKEVGARG 6693
>U21733-1|AAB38384.1| 869|Caenorhabditis elegans UNC-44 protein.
Length = 869
Score = 27.1 bits (57), Expect = 5.1
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = -3
Query: 253 GKYSHLTSSNLHSKLREDLERLKKIRAHRG 164
GKY H +S NL ++ ERL+K RG
Sbjct: 539 GKYRHQSSDNLSLTSLQEFERLEKEVGARG 568
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 368 RAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTKGYC 258
R G CTE++A++ ++ P +++ W TT C
Sbjct: 931 RRGSCTEDDASQTRRCVNGPCEHSYLTWSEWTTCETC 967
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 368 RAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTKGYC 258
R G CTE++A++ ++ P +++ W TT C
Sbjct: 931 RRGSCTEDDASQTRRCVNGPCEHSYLTWSEWTTCETC 967
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 26.2 bits (55), Expect = 9.0
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = -2
Query: 368 RAGECTEEEAAKIVTIMSNPSQYTIPDWFLNTTKGYC 258
R G CTE++A++ ++ P +++ W TT C
Sbjct: 931 RRGSCTEDDASQTRRCVNGPCEHSYLTWSEWTTCETC 967
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,537,702
Number of Sequences: 27780
Number of extensions: 141124
Number of successful extensions: 460
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 455
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 460
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 641068680
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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