Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= S06A01NCLL0022_C12
(441 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha 2|Schizosacchar... 221 4e-59
SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|ch... 212 2e-56
SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces... 116 1e-27
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 101 6e-23
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 32 0.034
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 31 0.10
SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces po... 27 0.97
SPAC17C9.03 |tif471||translation initiation factor eIF4G |Schizo... 27 0.97
SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces ... 27 1.3
SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces pom... 26 2.2
SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual 26 2.2
SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual 25 3.9
SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein Pop1... 25 5.2
SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr... 25 5.2
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 5.2
SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|c... 25 6.8
SPBC19G7.06 |mbx1||MADS-box transcription factor Mbx1|Schizosacc... 24 9.0
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 24 9.0
SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1 |Schizosa... 24 9.0
>SPBC800.05c |tub1|atb2, alp2, ban5|tubulin alpha
2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 449
Score = 221 bits (540), Expect = 4e-59
Identities = 94/130 (72%), Positives = 111/130 (85%)
Frame = +3
Query: 9 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVD 188
GQAG QIGNACWELYCLEHGIQP+G M + D F+TFFSETG GK+VPR+++VD
Sbjct: 10 GQAGTQIGNACWELYCLEHGIQPNGYMNPETASQNSDGGFSTFFSETGQGKYVPRSIYVD 69
Query: 189 LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQC 368
LEP V+D+VRTG YR LFHPEQLITGKEDA+NNYARGHYT+GKE+VD V D+IR++AD C
Sbjct: 70 LEPNVIDQVRTGPYRDLFHPEQLITGKEDASNNYARGHYTVGKELVDEVTDKIRRIADNC 129
Query: 369 TGLQGFLIFH 398
+GLQGFL+FH
Sbjct: 130 SGLQGFLVFH 139
>SPBC16A3.15c |nda2||tubulin alpha 1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 455
Score = 212 bits (518), Expect = 2e-56
Identities = 94/135 (69%), Positives = 113/135 (83%), Gaps = 5/135 (3%)
Frame = +3
Query: 9 GQAGVQIGNACWELYCLEHGIQPDGQMPTD-----KTIGGGDDSFNTFFSETGAGKHVPR 173
GQAGVQIGNACWELYCLEHGI PDG PT+ K +D F TFFSETG GK VPR
Sbjct: 10 GQAGVQIGNACWELYCLEHGIGPDG-FPTENSEVHKNNSYLNDGFGTFFSETGQGKFVPR 68
Query: 174 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 353
+++VDLEP V+D+VRTG Y+ LFHPEQ++TGKEDA+NNYARGHYT+GKE++D VL+RIR+
Sbjct: 69 SIYVDLEPNVIDQVRTGPYKDLFHPEQMVTGKEDASNNYARGHYTVGKEMIDSVLERIRR 128
Query: 354 LADQCTGLQGFLIFH 398
+AD C+GLQGFL+FH
Sbjct: 129 MADNCSGLQGFLVFH 143
>SPBC26H8.07c |nda3|ben1, alp12|tubulin beta |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 448
Score = 116 bits (280), Expect = 1e-27
Identities = 56/132 (42%), Positives = 77/132 (58%)
Frame = +3
Query: 3 RGGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 182
+ GQ G Q+G A W EHG+ G T + N +F+E GK+VPRAV
Sbjct: 8 QAGQCGNQVGAAFWSTIADEHGLDSAGIY--HGTSEAQHERLNVYFNEAAGGKYVPRAVL 65
Query: 183 VDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLAD 362
VDLEP +D V++G + LF P+ +I G+ A N +A+GHYT G E+ D VLD +R+ A+
Sbjct: 66 VDLEPGTMDAVKSGKFGNLFRPDNIIYGQSGAGNIWAKGHYTEGAELADAVLDVVRREAE 125
Query: 363 QCTGLQGFLIFH 398
C LQGF + H
Sbjct: 126 ACDALQGFQLTH 137
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 101 bits (241), Expect = 6e-23
Identities = 51/134 (38%), Positives = 80/134 (59%), Gaps = 2/134 (1%)
Frame = +3
Query: 3 RGGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVF 182
+ GQ G QIG+ W+ CLEHGI PDG + + T G D + FF ++ +++PRA+
Sbjct: 9 QAGQCGNQIGSQFWQQLCLEHGIGPDGTLESFAT--EGVDRKDVFFYQSDDTRYIPRAIL 66
Query: 183 VDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRIRKL 356
+DLEP VV+ + + TY L++PE ++ K A NN+A G Y+ + I + ++D I +
Sbjct: 67 IDLEPRVVNNILSDTYGSLYNPENILITKNGGGAGNNWANG-YSHAERIFEDIMDMIDRE 125
Query: 357 ADQCTGLQGFLIFH 398
AD L+GF + H
Sbjct: 126 ADGSDSLEGFSLLH 139
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 32.3 bits (70), Expect = 0.034
Identities = 31/102 (30%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Frame = +1
Query: 22 SRSEMPAGSCIALSTASNLM--VRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSIL 192
SRS P + ++S A+ Q+T P+ V + TP T SS L S+ P+ SSSIL
Sbjct: 346 SRSSKPTDTTNSISFANTTPENTSTQITSPTAVNSSTPITSSSV---LNSSTPITSSSIL 402
Query: 193 N-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 312
N +T S++ ++ + ++ L+ + +T+L +TP+
Sbjct: 403 NTSTPITSSSVLNSSTPITSSSILNSSTPITSSTVLNSSTPI 444
Score = 28.3 bits (60), Expect = 0.55
Identities = 29/93 (31%), Positives = 42/93 (45%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++ + L +TP T SS L ++ P+ SSS+LN
Sbjct: 968 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSSV---LNTSTPITSSSVLNSSTA 1019
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
S+ A S I ++ L P T+ VV T
Sbjct: 1020 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1052
Score = 28.3 bits (60), Expect = 0.55
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 1269 STPITSSTA---LNTSIPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 1325
Query: 298 VTT 306
V T
Sbjct: 1326 VNT 1328
Score = 27.9 bits (59), Expect = 0.73
Identities = 29/93 (31%), Positives = 43/93 (46%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1748 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1799
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
S+ A S I ++ L P T+ VV T
Sbjct: 1800 ITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 1832
Score = 27.5 bits (58), Expect = 0.97
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 501 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 557
Query: 298 VTT 306
V T
Sbjct: 558 VNT 560
Score = 27.5 bits (58), Expect = 0.97
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 192
S P S AL+T++ + L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 2096 SSTPITSSTALNTSTPITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 2154
Query: 193 NPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
N S+ A S I ++ L P T+ VV +TP+
Sbjct: 2155 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPI 2196
Score = 27.5 bits (58), Expect = 0.97
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2613 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2669
Query: 298 VTT 306
V T
Sbjct: 2670 VNT 2672
Score = 27.5 bits (58), Expect = 0.97
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2841 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2897
Query: 298 VTT 306
V T
Sbjct: 2898 VNT 2900
Score = 27.5 bits (58), Expect = 0.97
Identities = 22/63 (34%), Positives = 32/63 (50%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T+ V
Sbjct: 2937 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTSITSSSVLNSSTPITSSTV 2993
Query: 298 VTT 306
V T
Sbjct: 2994 VNT 2996
Score = 27.1 bits (57), Expect = 1.3
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL* 204
S S ++++S L +T S + T TP T SS L S+ P+ SSSILN
Sbjct: 374 SPTAVNSSTPITSSSVLNSSTPITSSSILNTSTPITSSSV---LNSSTPITSSSILNSST 430
Query: 205 LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 431 PITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 468
Score = 27.1 bits (57), Expect = 1.3
Identities = 29/92 (31%), Positives = 44/92 (47%), Gaps = 3/92 (3%)
Frame = +1
Query: 46 SCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL*LTRSAL 222
S ++++S L +T + + T TP T SS L S+ P+ SSS+LN S+
Sbjct: 608 SSTPITSSSVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSVLNSSTPITSST 664
Query: 223 AHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 312
A S I ++ L P T T L +TP+
Sbjct: 665 ALNTSTPITSSSVLNSSTPITSSTALNTSTPI 696
Score = 27.1 bits (57), Expect = 1.3
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 1/96 (1%)
Frame = +1
Query: 22 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNP 198
S S + + + I STA N +T S + + TP T S+A L ++ P+ SSS+LN
Sbjct: 698 SSSVLNSSTAITSSTALNTST--PITSSSVLNSSTPITSSTA---LNTSTPITSSSVLNS 752
Query: 199 L*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
S+ S I ++ L P T+ VV T
Sbjct: 753 STPITSSSILNSSTPITSSSVLNSSTPITSSTVVNT 788
Score = 27.1 bits (57), Expect = 1.3
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 192
S P S AL+T++ + L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 1904 SSTPITSSTALNTSTPITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 1962
Query: 193 NPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
N S+ A S I ++ L P T+ V+ T
Sbjct: 1963 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSSVLNT 2000
Score = 27.1 bits (57), Expect = 1.3
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 5/98 (5%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTF-----PVPSSSIL 192
S P S ++T++++ L + + T+ S +S+ P +ST P+ SSS+L
Sbjct: 2408 SSTPITSSTVVNTSTSITSSSVLNSSTPI-TSSSVLNSSTPITSSTVVNSSTPITSSSVL 2466
Query: 193 NPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
N S+ A S I ++ L P T+ VV T
Sbjct: 2467 NSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNT 2504
Score = 26.6 bits (56), Expect = 1.7
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 2/97 (2%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 656 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTA 707
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 312
S+ A S I ++ L P T T L +TP+
Sbjct: 708 ITSSTALNTSTPITSSSVLNSSTPITSSTALNTSTPI 744
Score = 26.6 bits (56), Expect = 1.7
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Frame = +1
Query: 46 SCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNPL*LTRSAL 222
S ++++S L +T + V T TP T S+ + S+ P+ SSS+LN S+
Sbjct: 812 SSTPITSSSVLNSSTPITSSTVVNTSTPITSSTV---VNSSTPITSSSVLNSSTPITSST 868
Query: 223 AHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
A S I ++ L P T+ VV T
Sbjct: 869 ALNTSTPITSSSVLNSSTPITSSTVVNT 896
Score = 26.6 bits (56), Expect = 1.7
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1580 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1631
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
S+ S I ++ +L P T+ VV +TP+
Sbjct: 1632 ITSSTVLNSSTPITSSTALNTSPPITSSTVVNSSTPI 1668
Score = 26.2 bits (55), Expect = 2.2
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 2/99 (2%)
Frame = +1
Query: 22 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL 201
S S + + + I STA N +T S + ++ + SS+ L S+ PV SSS+LN
Sbjct: 3314 SSSVLNSSTAITSSTALNTST--PITSSSVLNSSTAITSSSI--LNSSTPVTSSSVLNSS 3369
Query: 202 *LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 3370 TPITSSTVVNSSTPITSSTALNTSTPITSSSVLNSSTPI 3408
Score = 25.8 bits (54), Expect = 3.0
Identities = 25/88 (28%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Frame = +1
Query: 46 SCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSAL 222
S +++++ L +T S + ++ + SS+ L S+ P+ SSS+LN +T S +
Sbjct: 3200 SSTPITSSTTLNTSTPITSSSVLNSSTAITSSS--VLNSSTPITSSSVLNSSTPITSSTV 3257
Query: 223 AHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
+T S I ++ L P T+ VV T
Sbjct: 3258 VNT-STPITSSSVLNSSTPITSSTVVNT 3284
Score = 25.8 bits (54), Expect = 3.0
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ S I ++ +L P T+ V
Sbjct: 3381 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
Query: 298 V--TTPL 312
V +TP+
Sbjct: 3438 VNSSTPI 3444
Score = 25.4 bits (53), Expect = 3.9
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ S I ++ L P T+ V
Sbjct: 1065 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTV 1121
Query: 298 VTT 306
V T
Sbjct: 1122 VNT 1124
Score = 25.4 bits (53), Expect = 3.9
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T SS L S+ P+ SSS+LN S+ S I ++ +L +P T+ V
Sbjct: 1233 STPITSSSI---LNSSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSIPITSSSV 1289
Query: 298 V--TTPL 312
+ +TP+
Sbjct: 1290 LNSSTPI 1296
Score = 25.4 bits (53), Expect = 3.9
Identities = 32/100 (32%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +1
Query: 22 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNP 198
S S + + + I ST N +T S V + TP T S+A L ++ P+ SSS+LN
Sbjct: 1550 SSSVLNSSTPITSSTVVNTST--PITSSSVVNSSTPITSSTA---LNTSTPITSSSVLNS 1604
Query: 199 L*LTRSALAHTDSCFIQNNLSLVRRMPQT--TMLVVTTPL 312
S+ A S I ++ L P T T+L +TP+
Sbjct: 1605 STPITSSTALNTSTPITSSSVLNSSTPITSSTVLNSSTPI 1644
Score = 25.4 bits (53), Expect = 3.9
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 1844 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 1895
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 1896 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 1932
Score = 25.4 bits (53), Expect = 3.9
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 294
+TP T S+A L ++ P+ SSS+LN +T S++ +T S I ++ L P T+
Sbjct: 1965 STPITSSTA---LNTSTPITSSSVLNSSTPITSSSVLNT-STPITSSSVLNSSTPITSST 2020
Query: 295 VVTT 306
VV T
Sbjct: 2021 VVNT 2024
Score = 25.4 bits (53), Expect = 3.9
Identities = 28/97 (28%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++ + L +TP T S+A L ++ P+ SSS+LN
Sbjct: 2036 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTA---LNTSTPITSSSVLNSSTP 2087
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
S+ S I ++ +L P T+ V+ +TP+
Sbjct: 2088 ITSSTVLNSSTPITSSTALNTSTPITSSSVLNSSTPI 2124
Score = 25.4 bits (53), Expect = 3.9
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 294
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2301 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2356
Query: 295 VVTT 306
VV T
Sbjct: 2357 VVNT 2360
Score = 25.4 bits (53), Expect = 3.9
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNNLSLVRRMPQTTML 294
+TP T S+A L ++ P+ SSS+LN +T S + +T S I ++ L P T+
Sbjct: 2709 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT-STPITSSSVLNSSTPITSST 2764
Query: 295 VVTT 306
VV T
Sbjct: 2765 VVNT 2768
Score = 25.0 bits (52), Expect = 5.2
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 3/98 (3%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL* 204
S P S AL+T++ + L +TP T S+ L S+ P+ SSS+LN
Sbjct: 1064 SSTPITSSTALNTSTPITSSSVLN-----SSTPITSSTV---LNSSTPITSSSVLNSSTP 1115
Query: 205 LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
+T S + +T S I ++ +L P T+ V+ +TP+
Sbjct: 1116 ITSSTVVNT-STPITSSTALNTSTPITSSSVLNSSTPI 1152
Score = 24.6 bits (51), Expect = 6.8
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 3/92 (3%)
Frame = +1
Query: 46 SCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILN-PL*LTRSA 219
S +++++ L +T + + T TP T SS L S+ P+ SSS+LN +T S
Sbjct: 428 SSTPITSSTVLNSSTPITSSTALNTSTPITSSSV---LNSSTPITSSSVLNSSTPITSST 484
Query: 220 LAHTDSCFIQNN-LSLVRRMPQTTMLVVTTPL 312
+ +T + + ++ + +T L +TP+
Sbjct: 485 VVNTSTPITSSTVVNSSTPITSSTALNTSTPI 516
Score = 24.6 bits (51), Expect = 6.8
Identities = 31/100 (31%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Frame = +1
Query: 22 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILNP 198
S S + + + I ST N +TR S + + TP T S+ L S+ P+ SSS+LN
Sbjct: 566 SSSVLNSSTPITSSTVVNTST--PITRYSVLNSSTPITSSTV---LNSSTPITSSSVLNS 620
Query: 199 L*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV--TTPL 312
S+ A S I ++ L P T+ V+ +TP+
Sbjct: 621 STPITSSTALNTSTPITSSSVLNSSTPITSSSVLNSSTPI 660
Score = 24.6 bits (51), Expect = 6.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 70 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFI 246
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 1370 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 1428
Query: 247 QNNLSLVRRMPQTTMLVVTT 306
++ + P T+ VV T
Sbjct: 1429 TSSTVVNSSTPITSSTVVNT 1448
Score = 24.6 bits (51), Expect = 6.8
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFIQNN-LSLVRRMPQTTM 291
+TP T SS L S+ P+ SSS+LN +T S + +T + ++ ++ + +T
Sbjct: 1533 STPITSSSV---LNSSTPITSSSVLNSSTPITSSTVVNTSTPITSSSVVNSSTPITSSTA 1589
Query: 292 LVVTTPL 312
L +TP+
Sbjct: 1590 LNTSTPI 1596
Score = 24.6 bits (51), Expect = 6.8
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQT--TM 291
+TP T S+A L ++ P+ SSS+LN S+ A S I ++ L P T T
Sbjct: 1749 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTA 1805
Query: 292 LVVTTPL 312
L +TP+
Sbjct: 1806 LNTSTPI 1812
Score = 24.6 bits (51), Expect = 6.8
Identities = 20/63 (31%), Positives = 31/63 (49%)
Frame = +1
Query: 118 TTPSTRSSARPELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLV 297
+TP T S+A L ++ P+ SSS+LN S+ S I ++ + P T+ V
Sbjct: 2157 STPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTVVNTSTPITSSTV 2213
Query: 298 VTT 306
V T
Sbjct: 2214 VNT 2216
Score = 24.6 bits (51), Expect = 6.8
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 70 SNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHTDSCFI 246
S+ +V S ST ++ L S+ P+ SSS+LN +T S + +T S I
Sbjct: 2210 SSTVVNTSTPITSSTVVNSSTPITSSTVLNSSTPITSSSVLNSSTPITSSTVVNT-STPI 2268
Query: 247 QNNLSLVRRMPQTTMLVVTT 306
++ + P T+ VV T
Sbjct: 2269 TSSTVVNSSTPITSSTVVNT 2288
Score = 24.6 bits (51), Expect = 6.8
Identities = 24/88 (27%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Frame = +1
Query: 58 LSTASNLMVRCQLTRPSGVET-TPSTRSSARPELASTFPVPSSSILN-PL*LTRSALAHT 231
++++S L +T + V T TP T S+A L ++ P+ SSS+LN +T S + +T
Sbjct: 2748 ITSSSVLNSSTPITSSTVVNTSTPITSSTA---LNTSTPITSSSVLNSSTPITSSTVVNT 2804
Query: 232 DSCFIQNN-LSLVRRMPQTTMLVVTTPL 312
+ + ++ + +T+L +TP+
Sbjct: 2805 STPITSSTVVNSSTPITSSTVLNSSTPI 2832
Score = 24.2 bits (50), Expect = 9.0
Identities = 25/93 (26%), Positives = 42/93 (45%)
Frame = +1
Query: 28 SEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*L 207
S P S AL+T++++ L +TP T S+ + ++ P+ SSS+LN
Sbjct: 1292 SSTPITSSTALNTSTSITSSSVLN-----SSTPITSSTV---VNTSTPITSSSVLNSSTP 1343
Query: 208 TRSALAHTDSCFIQNNLSLVRRMPQTTMLVVTT 306
S+ S I ++ + P T+ VV T
Sbjct: 1344 ITSSTVVNSSTPITSSTVVNTSTPITSSTVVNT 1376
Score = 24.2 bits (50), Expect = 9.0
Identities = 23/87 (26%), Positives = 43/87 (49%)
Frame = +1
Query: 46 SCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILNPL*LTRSALA 225
S A++++S + +T S + ++ + SS+ L S+ P+ SSSILN S+
Sbjct: 3092 SSTAITSSSIVNSSTPITSSSVLNSSTAITSSSI--LNSSTPITSSSILNSSTPITSSTV 3149
Query: 226 HTDSCFIQNNLSLVRRMPQTTMLVVTT 306
S I ++ +L P T+ V+ +
Sbjct: 3150 VNSSTPITSSTTLNTSTPITSSSVLNS 3176
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 30.7 bits (66), Expect = 0.10
Identities = 19/58 (32%), Positives = 31/58 (53%)
Frame = +1
Query: 22 SRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 195
S S + + + ST S+L ++PS T+ ST SSA P S+ + SSS+++
Sbjct: 160 SSSSLSSSDPLTSSTFSSLSSSTSSSQPSVSSTSSSTFSSAAPTSTSSSYLSSSSVVS 217
>SPBC36.04 |cys11|cys1a|cysteine synthase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 351
Score = 27.5 bits (58), Expect = 0.97
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 9/86 (10%)
Frame = +1
Query: 7 VAKPESRSEMPAGSCIALSTASNLMVR-CQLTRPSGVETT---PSTRSSARPEL-----A 159
V E + ++ G I TA N + + R G + P+T+S A+ + A
Sbjct: 62 VRDAEKKGKLSRGGTIVEGTAGNTGIGLAHIARARGYKCVIYMPNTQSQAKIDTLKFLGA 121
Query: 160 STFPVPSSSILNPL*LTRSALAHTDS 237
PVP + NPL A H +S
Sbjct: 122 EVHPVPVAPFSNPLNYNHQARRHAES 147
>SPAC17C9.03 |tif471||translation initiation factor eIF4G
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1403
Score = 27.5 bits (58), Expect = 0.97
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +1
Query: 91 QLTRPSGVETTPSTRSSARPELASTFPVPSSS 186
Q +PSGVE T ++R++A+ + ST + S +
Sbjct: 42 QAVKPSGVEPTNTSRANAQKKTESTGKITSEA 73
>SPAC6G9.05 |pcd1||coenzyme A diphosphatase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 285
Score = 27.1 bits (57), Expect = 1.3
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +1
Query: 151 ELASTFPVPSSSILNPL*LTRSALAHTDSCFIQNNLSLVRRMPQTTMLVV 300
E+ F VP +S LNP S +TD +++ N+ + R+ T +++
Sbjct: 218 EVKDLFYVPLTSFLNPKHQKISRFRNTDLLYVEFNIDKIPRIWGITAVIL 267
>SPBC354.10 |||RNAPII degradation factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 963
Score = 26.2 bits (55), Expect = 2.2
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +1
Query: 103 PSGVETTPSTRSSARPELASTFPV 174
P+ VETTPST +SA + + F +
Sbjct: 350 PANVETTPSTATSAPKKSTAPFAI 373
>SPAPB1E7.04c |||chitinase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 1236
Score = 26.2 bits (55), Expect = 2.2
Identities = 20/60 (33%), Positives = 29/60 (48%)
Frame = +1
Query: 16 PESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSSILN 195
P S S + LST+S ++ T SG PST SS+ P +S P +S+L+
Sbjct: 483 PISSSSSASSPQSTLSTSSEVVSEVSSTLLSGSSAIPST-SSSTPS-SSIISSPMTSVLS 540
>SPAC869.01 |||amidase |Schizosaccharomyces pombe|chr 1|||Manual
Length = 583
Score = 25.4 bits (53), Expect = 3.9
Identities = 11/24 (45%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Frame = -2
Query: 347 DAVEDQVYDFLSNGVVT-TSIVVC 279
DA DQ+ +++ NG++T T IV C
Sbjct: 68 DATIDQLQNYMENGILTSTDIVHC 91
>SPBC1718.01 |pop1|ste16, SPBC2G2.18|F-box/WD repeat protein
Pop1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 775
Score = 25.0 bits (52), Expect = 5.2
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = -1
Query: 111 PRWSCQLASDHQVGCRAQGNTAPSRHFRSGLR 16
P SC+L S+H+ C + N++ S + + R
Sbjct: 110 PHLSCELPSEHREKCLKRRNSSLSSNLHANKR 141
>SPBC1604.02c |||PPR repeat protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 697
Score = 25.0 bits (52), Expect = 5.2
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = +1
Query: 211 RSALAHTDSCFIQNNLSLVRRMPQT 285
+S + HT++ NN SL+RR+ T
Sbjct: 605 KSLIQHTNNLLQSNNASLLRRLAAT 629
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 5.2
Identities = 15/43 (34%), Positives = 24/43 (55%)
Frame = -2
Query: 140 EERVEGVVSTPDGLVSWHLTIRLDAVLKAIQLPAGISDLDSGL 12
EE EG TP +T+R D+V++ + AG++D+ S L
Sbjct: 320 EEISEGEEYTPIEESKEPITVRRDSVIQIDESSAGLTDVISEL 362
>SPBC13G1.05 |||DUF747 family protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 649
Score = 24.6 bits (51), Expect = 6.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +3
Query: 267 KEDAANNYARGHYTIGKEIVDLV 335
+E ANN+ RGH I K+ D +
Sbjct: 599 RERKANNFFRGHIEIDKKTKDFL 621
>SPBC19G7.06 |mbx1||MADS-box transcription factor
Mbx1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 24.2 bits (50), Expect = 9.0
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +1
Query: 7 VAKPESRSEMPAGSCIALSTASNLMVRCQLTRPSGVETTPSTRSSARPELASTFPVPSSS 186
+A + S P+ +C + + + N + + TTP+T S + + T P +S
Sbjct: 96 IASVTTYSAQPSNNCSSATDSENDFQSFTIKSSTTYHTTPTTASENKKIESITIP-DHAS 154
Query: 187 ILNPL*LT 210
+ N L L+
Sbjct: 155 VYNDLPLS 162
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 24.2 bits (50), Expect = 9.0
Identities = 17/71 (23%), Positives = 34/71 (47%)
Frame = -2
Query: 440 EERSETRTGATTERVEDEESLEACALVSEFADAVEDQVYDFLSNGVVTTSIVVCGILLTS 261
E+ + +TG ++ +++E ++A D E+QV + S G + VV LL +
Sbjct: 109 EKPARPQTGEGSDNEDEDEDIDALIEDLYSQDQEEEQVEEEESPGPAGAAKVVPEELLET 168
Query: 260 DKLFWMKQLSV 228
D + + + V
Sbjct: 169 DPKYGLTESEV 179
>SPAC22F3.10c |gcs1|apd1|glutamate-cysteine ligase Gcs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 669
Score = 24.2 bits (50), Expect = 9.0
Identities = 16/53 (30%), Positives = 26/53 (49%)
Frame = -2
Query: 269 LTSDKLFWMKQLSVCASADLVNYSGFKIDEDGTGNVLASSGLAEERVEGVVST 111
L D+L + L + SA + G+ D+D NV+A G ++R E + T
Sbjct: 327 LLYDQLTPITPLMLALSAGTPAFRGYLADQDCRWNVIA--GAVDDRTEEEMKT 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,980,026
Number of Sequences: 5004
Number of extensions: 43263
Number of successful extensions: 228
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 67
effective length of database: 2,027,210
effective search space used: 160149590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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